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The map label for this gene is ybcL [C]

Identifier: 89897931

GI number: 89897931

Start: 142417

End: 142869

Strand: Direct

Name: ybcL [C]

Synonym: CF0124

Alternate gene names: 89897931

Gene position: 142417-142869 (Clockwise)

Preceding gene: 89897930

Following gene: 89897936

Centisome position: 12.21

GC content: 39.96

Gene sequence:

>453_bases
ATGCAATTACTTTCACCAGCATTTGATTACGGAAAACCGATCCCTAAAAAATATACATGTCAAGGAATTAATATTTCTCC
ACCCTTAATATTCAAAGATGTTCCCGCGGAAGCAAAAAGCTTAGCTTTGATCGTTGAAGATCCCGATGTGCCAAAAAATT
TACGAGAAGATGGTCTGTGGATTCACTGGGTGGTATATAATCTCTCTCCAGCCATAACCGAGCTTGTAGAAGGCGCGAGT
ATTTTTGCTGTTCAAGGATTAAATACTTCAGGGAAAGGTTGCTATGAAGGGCCATGCCCACCAGATAGACAACATCGATA
TTTCTTCTATTGCTATGCTCTAGATACTATCTTGCCGTCAGAAGAAAATGTAACAAGAGATCAGCTTCTCGAAGTGATGG
AAGGTCATACAATAGATAATGCAGAGCTAATGGGAACATACGAGAAAGACTAG

Upstream 100 bases:

>100_bases
GATGTGTTATCAACAAATCGAGAAGTTGCCTTACTTAAGCTGAAAGAAGATGCTAAATCCAATGTTTTGCAAAATCTAGA
TATCTAAACGGAGACGAGTT

Downstream 100 bases:

>100_bases
ATTCCTAATCTTCTTCAGGAATAAATTCTTCTCGTTTTTTCCTATGCTTCCAATATAGCGGGCCGTAGTGATAACACAAT
TCCTCGCCCGCTTCAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MQLLSPAFDYGKPIPKKYTCQGINISPPLIFKDVPAEAKSLALIVEDPDVPKNLREDGLWIHWVVYNLSPAITELVEGAS
IFAVQGLNTSGKGCYEGPCPPDRQHRYFFYCYALDTILPSEENVTRDQLLEVMEGHTIDNAELMGTYEKD

Sequences:

>Translated_150_residues
MQLLSPAFDYGKPIPKKYTCQGINISPPLIFKDVPAEAKSLALIVEDPDVPKNLREDGLWIHWVVYNLSPAITELVEGAS
IFAVQGLNTSGKGCYEGPCPPDRQHRYFFYCYALDTILPSEENVTRDQLLEVMEGHTIDNAELMGTYEKD
>Mature_150_residues
MQLLSPAFDYGKPIPKKYTCQGINISPPLIFKDVPAEAKSLALIVEDPDVPKNLREDGLWIHWVVYNLSPAITELVEGAS
IFAVQGLNTSGKGCYEGPCPPDRQHRYFFYCYALDTILPSEENVTRDQLLEVMEGHTIDNAELMGTYEKD

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=142, Percent_Identity=33.8028169014084, Blast_Score=73, Evalue=7e-15,
Organism=Escherichia coli, GI1786990, Length=129, Percent_Identity=36.4341085271318, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 16836; Mature: 16836

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLSPAFDYGKPIPKKYTCQGINISPPLIFKDVPAEAKSLALIVEDPDVPKNLREDGLW
CCCCCCCHHCCCCCCCCEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHCCCE
IHWVVYNLSPAITELVEGASIFAVQGLNTSGKGCYEGPCPPDRQHRYFFYCYALDTILPS
EEEEEEECCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHCCC
EENVTRDQLLEVMEGHTIDNAELMGTYEKD
CCCCCHHHHHHHHCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MQLLSPAFDYGKPIPKKYTCQGINISPPLIFKDVPAEAKSLALIVEDPDVPKNLREDGLW
CCCCCCCHHCCCCCCCCEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCHHHCCCE
IHWVVYNLSPAITELVEGASIFAVQGLNTSGKGCYEGPCPPDRQHRYFFYCYALDTILPS
EEEEEEECCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHCCC
EENVTRDQLLEVMEGHTIDNAELMGTYEKD
CCCCCHHHHHHHHCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]