| Definition | Chlamydophila felis Fe/C-56, complete genome. |
|---|---|
| Accession | NC_007899 |
| Length | 1,166,239 |
Click here to switch to the map view.
The map label for this gene is 89897889
Identifier: 89897889
GI number: 89897889
Start: 88773
End: 89237
Strand: Direct
Name: 89897889
Synonym: CF0082
Alternate gene names: NA
Gene position: 88773-89237 (Clockwise)
Preceding gene: 89897880
Following gene: 89897894
Centisome position: 7.61
GC content: 44.09
Gene sequence:
>465_bases ATGCCATTTGCTAAGGAAGCAGAGATGCAGCGCACATGTTGGAAGTGTGAGGGTAGCGTATCTATGCATATGCCCCAGTG TCCTTATTGCAGTGCATTTCTTCAAGATCCTCCGGGAGCTTCAGGTGGATTCTCTTCATGTCATATTTCTTTCCCAGAAG GCTCTGCAAAGGGAGAATCGGAGGATCTTTTTGCTGTTTCTTCAGAAGATTGGGAAGCTGTTCTTAGTGATCAAAATACT TTCCAAAAGCCGACGGAACAATCTGAAACTGATTGGAATTGGTTACAACATTGGCCGCTCATCGCCTTATTTTTAGGTGC AGGGTTTTTAGCCTTTGCTTTGATTATTCTTCTATTTGCTACAGACTCTGGATTAACCTTGTCATGGCCTAAAAACCGTG CCTATCTCTACGGGGTTTTAGGCGCTGTATTTGCTTATCGGGGCTATTTGAAGCTTGCGCAATGA
Upstream 100 bases:
>100_bases TTAAGTTATGTACTGTAATTATCCATAGTGTGTACAAATCAACATATAAGGAACGTTCTGTTTCTTTGTATTAAATTCCG AATAGGGAAGGTAGGTTATC
Downstream 100 bases:
>100_bases TATTTTCTCTAGTACTTTCTAATTAAATAAGAGGCTCTTCACTAGCATCTGAGATACTATCTATCGTATCCTCTACGCCA TTGCGCTCATCTTTATATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MPFAKEAEMQRTCWKCEGSVSMHMPQCPYCSAFLQDPPGASGGFSSCHISFPEGSAKGESEDLFAVSSEDWEAVLSDQNT FQKPTEQSETDWNWLQHWPLIALFLGAGFLAFALIILLFATDSGLTLSWPKNRAYLYGVLGAVFAYRGYLKLAQ
Sequences:
>Translated_154_residues MPFAKEAEMQRTCWKCEGSVSMHMPQCPYCSAFLQDPPGASGGFSSCHISFPEGSAKGESEDLFAVSSEDWEAVLSDQNT FQKPTEQSETDWNWLQHWPLIALFLGAGFLAFALIILLFATDSGLTLSWPKNRAYLYGVLGAVFAYRGYLKLAQ >Mature_153_residues PFAKEAEMQRTCWKCEGSVSMHMPQCPYCSAFLQDPPGASGGFSSCHISFPEGSAKGESEDLFAVSSEDWEAVLSDQNTF QKPTEQSETDWNWLQHWPLIALFLGAGFLAFALIILLFATDSGLTLSWPKNRAYLYGVLGAVFAYRGYLKLAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17089; Mature: 16958
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFAKEAEMQRTCWKCEGSVSMHMPQCPYCSAFLQDPPGASGGFSSCHISFPEGSAKGES CCCCCHHHHHHHHHHCCCCCEECCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCC EDLFAVSSEDWEAVLSDQNTFQKPTEQSETDWNWLQHWPLIALFLGAGFLAFALIILLFA CCEEEECCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDSGLTLSWPKNRAYLYGVLGAVFAYRGYLKLAQ CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PFAKEAEMQRTCWKCEGSVSMHMPQCPYCSAFLQDPPGASGGFSSCHISFPEGSAKGES CCCCHHHHHHHHHHCCCCCEECCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCCC EDLFAVSSEDWEAVLSDQNTFQKPTEQSETDWNWLQHWPLIALFLGAGFLAFALIILLFA CCEEEECCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDSGLTLSWPKNRAYLYGVLGAVFAYRGYLKLAQ CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA