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The map label for this gene is 89897808

Identifier: 89897808

GI number: 89897808

Start: 216

End: 1808

Strand: Direct

Name: 89897808

Synonym: CF0001

Alternate gene names: NA

Gene position: 216-1808 (Clockwise)

Preceding gene: NA

Following gene: 89897809

Centisome position: 0.02

GC content: 39.8

Gene sequence:

>1593_bases
ATGTTGAGCAGAGATGAAGAGTTTTCTTCAGAACAAAAGAAGAGTTTGTCTCATTTCGTTACCAACCTAGAAACAAACAT
TTTTGCTTTGAAGAATCTCCCAGAAGTTGTGAAAGGGGCCTTATTTTCCAAATACTCTAGGTCTACGTTAGGTTTACGGT
CCTTGCTTTTAAAAGAGTTCTTGAAAGGCGAAGGAGGAGACTTCTTAGACGATTCCGTTGTGGATTTCGAAGCTGGGATA
CATAAGGCTGCTGATTTTTACAGAAGAGTGCTGGATGGTTTTGGAGATGATTCTATAGGAGAGTTGGGTGGAGCCCACCT
TGCTATGGAAAGCGTTTCCATGCTCGCAGCAAAAATATTGGAAGACGCTCGTATTGGCGGATCTCCTTTAGAAAAATCTT
CTAGGTACGTTTATTTTGATCAAAAGGTAAAAGGGGAGTATTTATACTACCGCGATCCTATTTTAATGACCTCGGCCTTT
AAAGACGTGTTTTTGGGCACATGTGATTTCCTATTCGATACGTATACTGACTTGATTCCTAAAGTGCGTTCGTATTTTGA
AAAGATTTACCCAAAGGATGCGGAGGTTTCACAATCTGCTTATGCCATTTCTTTAAGAGCGAAAGTTCTCGATTGCTTAC
GAGGTCTTCTTCCTGCAGCAACGCTTACGAATTTAGGATTTTTTGGTAATGGAAGGTTTTGGCAAACATTGTTACACAAA
CTTCAAGGCCATAATCTTACAGAGATCAGACATATCGGAGAGAACTCTTTAACCGAGCTCATGAAAATCATTCCTTCTTT
TGTCAGTCGCGCAGAATCCCATCATCACCATCATCAAGCTATGTTAAACTATAGGCAGACTCTTAGAGAGCAATTAACAA
GTTTAGCAGAGAAATTTAGTAAAAGCTCCTCGCCTTCTAAACAAACGGGGGCACGTTTGGTTTACGGGGATCCCGAGGGT
ATTTATAAAGTTGCTGCAGGATTTCTTTTTCCATACTCGGAGCATACCTATGAAGAGCTTATCAATATCTGTCGCTCTAT
GCCTCGAGAAGATCTTATTCGTGTTTTAGAAGCAGGATCTTCATCCAGAGAAAACCGTCGTCATAAATCACCAAGAGGAT
TGGAGTGTTTAGAATTCGGATTTGATATTACAGCCGATTTCGGAGCTTATAGAGATCTTCAAAGACATAGAATACTGACT
CAGGAGCGCCAGTTGCTCACCACAAATCTTGGATACCATATTCCTGAGCAATTATTAGATACACCTATGGAAAAAGATTT
TCGAGAAGCTATGGAAAAAGCTGAGGAGGCTTATAACCAAATCTCCTTAGAATTTCCTGAAGAAGCTCAATATGTCGTTC
CTTTAGCCTACAATATACGCTGGTTTTTCCATATCAACGGAAGAGCCTTACAATGGCTTTGTGAACTACGATCTCAAGTT
CAGGGACACGAAAATTACAGAAAAATAGCGATAGACATGGCTAAAGAGGTAATTAGATTCGACCCTGTGTATGAAATATT
TTTTAAATTTGTAGATTATTCCGAATGTGATTTGGGTAGACTCAAACAAGAATCCCGAAAAAGATCTGCCTAG

Upstream 100 bases:

>100_bases
GTGAACACAAGATCAACCATTTTTCAACAGGATTTTTCAGCAAAAACGTTTTTGTTTTTTCTAATTCATATGGCAGTCTT
TTTAATTTTTGAGGTTTTTC

Downstream 100 bases:

>100_bases
GTATTTTTTAAATATAATCTTTGCGTTTACAGGAACCTTAGAGGTTGGTATTTTATTGCTTTCCAAGACGAAGGTCATAA
AATGAAAAACCTCATCGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MLSRDEEFSSEQKKSLSHFVTNLETNIFALKNLPEVVKGALFSKYSRSTLGLRSLLLKEFLKGEGGDFLDDSVVDFEAGI
HKAADFYRRVLDGFGDDSIGELGGAHLAMESVSMLAAKILEDARIGGSPLEKSSRYVYFDQKVKGEYLYYRDPILMTSAF
KDVFLGTCDFLFDTYTDLIPKVRSYFEKIYPKDAEVSQSAYAISLRAKVLDCLRGLLPAATLTNLGFFGNGRFWQTLLHK
LQGHNLTEIRHIGENSLTELMKIIPSFVSRAESHHHHHQAMLNYRQTLREQLTSLAEKFSKSSSPSKQTGARLVYGDPEG
IYKVAAGFLFPYSEHTYEELINICRSMPREDLIRVLEAGSSSRENRRHKSPRGLECLEFGFDITADFGAYRDLQRHRILT
QERQLLTTNLGYHIPEQLLDTPMEKDFREAMEKAEEAYNQISLEFPEEAQYVVPLAYNIRWFFHINGRALQWLCELRSQV
QGHENYRKIAIDMAKEVIRFDPVYEIFFKFVDYSECDLGRLKQESRKRSA

Sequences:

>Translated_530_residues
MLSRDEEFSSEQKKSLSHFVTNLETNIFALKNLPEVVKGALFSKYSRSTLGLRSLLLKEFLKGEGGDFLDDSVVDFEAGI
HKAADFYRRVLDGFGDDSIGELGGAHLAMESVSMLAAKILEDARIGGSPLEKSSRYVYFDQKVKGEYLYYRDPILMTSAF
KDVFLGTCDFLFDTYTDLIPKVRSYFEKIYPKDAEVSQSAYAISLRAKVLDCLRGLLPAATLTNLGFFGNGRFWQTLLHK
LQGHNLTEIRHIGENSLTELMKIIPSFVSRAESHHHHHQAMLNYRQTLREQLTSLAEKFSKSSSPSKQTGARLVYGDPEG
IYKVAAGFLFPYSEHTYEELINICRSMPREDLIRVLEAGSSSRENRRHKSPRGLECLEFGFDITADFGAYRDLQRHRILT
QERQLLTTNLGYHIPEQLLDTPMEKDFREAMEKAEEAYNQISLEFPEEAQYVVPLAYNIRWFFHINGRALQWLCELRSQV
QGHENYRKIAIDMAKEVIRFDPVYEIFFKFVDYSECDLGRLKQESRKRSA
>Mature_530_residues
MLSRDEEFSSEQKKSLSHFVTNLETNIFALKNLPEVVKGALFSKYSRSTLGLRSLLLKEFLKGEGGDFLDDSVVDFEAGI
HKAADFYRRVLDGFGDDSIGELGGAHLAMESVSMLAAKILEDARIGGSPLEKSSRYVYFDQKVKGEYLYYRDPILMTSAF
KDVFLGTCDFLFDTYTDLIPKVRSYFEKIYPKDAEVSQSAYAISLRAKVLDCLRGLLPAATLTNLGFFGNGRFWQTLLHK
LQGHNLTEIRHIGENSLTELMKIIPSFVSRAESHHHHHQAMLNYRQTLREQLTSLAEKFSKSSSPSKQTGARLVYGDPEG
IYKVAAGFLFPYSEHTYEELINICRSMPREDLIRVLEAGSSSRENRRHKSPRGLECLEFGFDITADFGAYRDLQRHRILT
QERQLLTTNLGYHIPEQLLDTPMEKDFREAMEKAEEAYNQISLEFPEEAQYVVPLAYNIRWFFHINGRALQWLCELRSQV
QGHENYRKIAIDMAKEVIRFDPVYEIFFKFVDYSECDLGRLKQESRKRSA

Specific function: Unknown

COG id: COG1351

COG function: function code F; Predicted alternative thymidylate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 thyX (flavin-dependent thymidylate synthase) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003669 [H]

Pfam domain/function: PF02511 Thy1 [H]

EC number: NA

Molecular weight: Translated: 60941; Mature: 60941

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure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HCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]