| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89257109
Identifier: 89257109
GI number: 89257109
Start: 1780702
End: 1781280
Strand: Reverse
Name: 89257109
Synonym: FTL_1849
Alternate gene names: NA
Gene position: 1781280-1780702 (Counterclockwise)
Preceding gene: 89257110
Following gene: 89257108
Centisome position: 93.95
GC content: 31.26
Gene sequence:
>579_bases ATGTATAATGTTGTTAAGTTTGGATGCCAAGAGCGACCTGAAATAAGTAGTGTAGAAGAGCCAACAAAGCCATTAGCAAT ACAAGATAAAAAAACGAAGGGTAATGTAATGACTTTTTGGCGACAAAAGCTTACATATGTTGGCTGTGGAGAAGAAAGAA GTGTGACGTTACATTATTTTATATATAATAATGAAAATCCTAAAAAAGTATATTATTCTATAAAAGCAAAGAATGATTCT ATACCTTTAAATAAAACTATTTTTGAAGGATCTTTTACTTCATTAGTATTAAGAAATGACGTGTTAAACGATGTTGTTAG ATTTTTATATTCTAAGAAATGTAGCATGCCTGAAGACAAACTAAGGGATCATATTAAATATTATACTGCTTCTGCTTTAA GATATGCTTTGATTTTATCTAACCAAAAGAGAATAAAAGTTCCACAATGGCAGGAGGTGTGGAGTGTAGATGCTTGCGAT AAAAATTACCATTTTCCAATCACTTTTACAGGAGACGGTGTTGGAGGAACATACTGGAGTATTGGCAAGGTTACTGATAC TGAAATTACAAAATCTTAA
Upstream 100 bases:
>100_bases TGAGGGTATCAAGAAAACTTACCTAAAAGAAATTGATCATGTTTTTGATAGATCTGTTAAGGCGTAAATATGAAAAAAAT ATTATCTTTTCTTTTTATTT
Downstream 100 bases:
>100_bases TAGTTTAAAAACATATCAGAAGTAGACATTATAAAAATCTTGATTATACTAAGAAGGTATAAATTTAAAGACCTTGTATT TTTATAATGTTATATAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MYNVVKFGCQERPEISSVEEPTKPLAIQDKKTKGNVMTFWRQKLTYVGCGEERSVTLHYFIYNNENPKKVYYSIKAKNDS IPLNKTIFEGSFTSLVLRNDVLNDVVRFLYSKKCSMPEDKLRDHIKYYTASALRYALILSNQKRIKVPQWQEVWSVDACD KNYHFPITFTGDGVGGTYWSIGKVTDTEITKS
Sequences:
>Translated_192_residues MYNVVKFGCQERPEISSVEEPTKPLAIQDKKTKGNVMTFWRQKLTYVGCGEERSVTLHYFIYNNENPKKVYYSIKAKNDS IPLNKTIFEGSFTSLVLRNDVLNDVVRFLYSKKCSMPEDKLRDHIKYYTASALRYALILSNQKRIKVPQWQEVWSVDACD KNYHFPITFTGDGVGGTYWSIGKVTDTEITKS >Mature_192_residues MYNVVKFGCQERPEISSVEEPTKPLAIQDKKTKGNVMTFWRQKLTYVGCGEERSVTLHYFIYNNENPKKVYYSIKAKNDS IPLNKTIFEGSFTSLVLRNDVLNDVVRFLYSKKCSMPEDKLRDHIKYYTASALRYALILSNQKRIKVPQWQEVWSVDACD KNYHFPITFTGDGVGGTYWSIGKVTDTEITKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22235; Mature: 22235
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNVVKFGCQERPEISSVEEPTKPLAIQDKKTKGNVMTFWRQKLTYVGCGEERSVTLHYF CCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHEEEEECCCCCEEEEEEE IYNNENPKKVYYSIKAKNDSIPLNKTIFEGSFTSLVLRNDVLNDVVRFLYSKKCSMPEDK EEECCCCEEEEEEEEECCCCCCCCCEEECCCHHEEEHHHHHHHHHHHHHHHCCCCCCHHH LRDHIKYYTASALRYALILSNQKRIKVPQWQEVWSVDACDKNYHFPITFTGDGVGGTYWS HHHHHHHHHHHHHHEEEEECCCCEECCCCHHHHEEECCCCCCCEEEEEEECCCCCCCEEE IGKVTDTEITKS ECCEECCCCCCC >Mature Secondary Structure MYNVVKFGCQERPEISSVEEPTKPLAIQDKKTKGNVMTFWRQKLTYVGCGEERSVTLHYF CCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHEEEEECCCCCEEEEEEE IYNNENPKKVYYSIKAKNDSIPLNKTIFEGSFTSLVLRNDVLNDVVRFLYSKKCSMPEDK EEECCCCEEEEEEEEECCCCCCCCCEEECCCHHEEEHHHHHHHHHHHHHHHCCCCCCHHH LRDHIKYYTASALRYALILSNQKRIKVPQWQEVWSVDACDKNYHFPITFTGDGVGGTYWS HHHHHHHHHHHHHHEEEEECCCCEECCCCHHHHEEECCCCCCCEEEEEEECCCCCCCEEE IGKVTDTEITKS ECCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA