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The map label for this gene is gatB

Identifier: 89257101

GI number: 89257101

Start: 1774756

End: 1776165

Strand: Reverse

Name: gatB

Synonym: FTL_1841

Alternate gene names: 89257101

Gene position: 1776165-1774756 (Counterclockwise)

Preceding gene: 89257102

Following gene: 89257100

Centisome position: 93.68

GC content: 36.88

Gene sequence:

>1410_bases
ATGGTGATAGGGCTAGAAGTCCATATTCAATTAAGTACTAAATCTAAGCTATTTTCGACTTCTGCAACAAAGTATGGTCA
ACATCAAAATACTCAAGCAGCATTTTTAGACTTAGGTTTGCCTGGAACGTTGCCTGTTGTAAATAAAGAAGCTATTCGTA
AAGCAGTGATATTTGGCTTAGCTGTAGATGCTAAGATATCAAAGGACAGTTTCTTTGCGCGAAAAAATTATTTCTATCCA
GATTTATCAAAAGGTTATCAGATTAGTCAATCAACTAATCCAATAGTCCAAGAAGGTAGATTAGAGATTGAAACTTCAAA
AGGACTAAAAACTATCAGAATTGAGCGTGCACATTTAGAAGAAGATGCCGGTAAGTCTGTGCATGGTTATATTGCTGGTG
AGACAGGATTAGATTACAATCGTGCTGGTACGCCACTTTTAGAGATTGTGACATATCCTGATTTTAGATCGGCTGAAGAA
GTGGTTGCATATCTTAAAAAACTTCATCAGCTAGTTAAGCATTTAGGTATTTGCGATGGTAACATGCAAGAAGGTTCATT
TAGATGTGATGTTAACTTGTCAATTAGACCACAAGGACAAGCTAAGTTTGGTACACGTGCAGAGCTTAAAAATATAAACT
CATTTAGGTTTATTGATAAAGCTATCGAGTATGAGTATGCTCGCCAAGTTAGTGTGTTGGAGTCAGGGGGCGAAGTCGTC
CAGGAAACGCGTCTTTATGATGCAGATGCTAATGAGACGCGCTCAATGCGTGCAAAAGAAGATGCTTTTGATTATCGTTA
TTTCCCAGATCCAGATTTATTGCCATTGGTGATAACCGATGAGTATATCGAGAGTATCAAAAAACAAATGCCACTGAAAT
CGGAAGAGCGTGAAGCGGTATATCGTGAGCATCTAGCTGAGCAGGAAGTTGAGTTTTTATTATCAAATCTTGAGATAGCT
GATTACTATGACAAAGTAGCAGTTGTGATAGGATACAAGCCAGCTTATAATTGGATAACAGTTGATCTAATATCAACTCT
TAATAGGGCTGAAAAGGAGTTTTCTAGTGATGTTGTTCCTGCTGAGATTCTGCTAGAAATTATTGCTAATGTCCAAAAAG
ATATAATATCTCAAGCTAATGCTAAGAAAGTGATAGCAGAATATATTGATGCTCCTAGTGCAATTGAAGCTATTATTGAA
AAGCTCGGTCTAAAACAAGTATCTGATGAGGGTATGATTCGCGAGTTAGTTCAAGGTATAATTGCTGCTAACCCTCAACA
AGCAGCTGACTTTAAAGCTGGTAAAACAAAGCTTATGAGCTTTTTTGTTGGGCAAGCTATGAAAGCAAGTAAAGGTAAAG
CAAATCCTAAGCAGGTTAATCAAATAGTTCAAGAAGAGCTAAATAAATAA

Upstream 100 bases:

>100_bases
ATGATAATATCTTGACGCAGATGGTAGTGCAGTATCAAAAGCATTATGGTATTGAAGAATTTATTTTACAACAAGCGAGG
ATTTAATAGTGAATTGGGAA

Downstream 100 bases:

>100_bases
AATAGGAAAATATAATGAATACGAATAAATTTTACTATGAACTTATGAAGCTAAATGTTTTAAGTAGTAGCTATGTTGAT
GATAGCTATAAAGCAGCGTG

Product: aspartyl/glutamyl-tRNA amidotransferase subunit B

Products: NA

Alternate protein names: Asp/Glu-ADT subunit B

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MVIGLEVHIQLSTKSKLFSTSATKYGQHQNTQAAFLDLGLPGTLPVVNKEAIRKAVIFGLAVDAKISKDSFFARKNYFYP
DLSKGYQISQSTNPIVQEGRLEIETSKGLKTIRIERAHLEEDAGKSVHGYIAGETGLDYNRAGTPLLEIVTYPDFRSAEE
VVAYLKKLHQLVKHLGICDGNMQEGSFRCDVNLSIRPQGQAKFGTRAELKNINSFRFIDKAIEYEYARQVSVLESGGEVV
QETRLYDADANETRSMRAKEDAFDYRYFPDPDLLPLVITDEYIESIKKQMPLKSEEREAVYREHLAEQEVEFLLSNLEIA
DYYDKVAVVIGYKPAYNWITVDLISTLNRAEKEFSSDVVPAEILLEIIANVQKDIISQANAKKVIAEYIDAPSAIEAIIE
KLGLKQVSDEGMIRELVQGIIAANPQQAADFKAGKTKLMSFFVGQAMKASKGKANPKQVNQIVQEELNK

Sequences:

>Translated_469_residues
MVIGLEVHIQLSTKSKLFSTSATKYGQHQNTQAAFLDLGLPGTLPVVNKEAIRKAVIFGLAVDAKISKDSFFARKNYFYP
DLSKGYQISQSTNPIVQEGRLEIETSKGLKTIRIERAHLEEDAGKSVHGYIAGETGLDYNRAGTPLLEIVTYPDFRSAEE
VVAYLKKLHQLVKHLGICDGNMQEGSFRCDVNLSIRPQGQAKFGTRAELKNINSFRFIDKAIEYEYARQVSVLESGGEVV
QETRLYDADANETRSMRAKEDAFDYRYFPDPDLLPLVITDEYIESIKKQMPLKSEEREAVYREHLAEQEVEFLLSNLEIA
DYYDKVAVVIGYKPAYNWITVDLISTLNRAEKEFSSDVVPAEILLEIIANVQKDIISQANAKKVIAEYIDAPSAIEAIIE
KLGLKQVSDEGMIRELVQGIIAANPQQAADFKAGKTKLMSFFVGQAMKASKGKANPKQVNQIVQEELNK
>Mature_469_residues
MVIGLEVHIQLSTKSKLFSTSATKYGQHQNTQAAFLDLGLPGTLPVVNKEAIRKAVIFGLAVDAKISKDSFFARKNYFYP
DLSKGYQISQSTNPIVQEGRLEIETSKGLKTIRIERAHLEEDAGKSVHGYIAGETGLDYNRAGTPLLEIVTYPDFRSAEE
VVAYLKKLHQLVKHLGICDGNMQEGSFRCDVNLSIRPQGQAKFGTRAELKNINSFRFIDKAIEYEYARQVSVLESGGEVV
QETRLYDADANETRSMRAKEDAFDYRYFPDPDLLPLVITDEYIESIKKQMPLKSEEREAVYREHLAEQEVEFLLSNLEIA
DYYDKVAVVIGYKPAYNWITVDLISTLNRAEKEFSSDVVPAEILLEIIANVQKDIISQANAKKVIAEYIDAPSAIEAIIE
KLGLKQVSDEGMIRELVQGIIAANPQQAADFKAGKTKLMSFFVGQAMKASKGKANPKQVNQIVQEELNK

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0064

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatB/gatE family. GatB subfamily

Homologues:

Organism=Homo sapiens, GI4758894, Length=496, Percent_Identity=34.4758064516129, Blast_Score=286, Evalue=4e-77,
Organism=Caenorhabditis elegans, GI115534094, Length=376, Percent_Identity=34.8404255319149, Blast_Score=208, Evalue=5e-54,
Organism=Saccharomyces cerevisiae, GI6319391, Length=515, Percent_Identity=29.5145631067961, Blast_Score=207, Evalue=3e-54,
Organism=Drosophila melanogaster, GI45550808, Length=487, Percent_Identity=32.4435318275154, Blast_Score=262, Evalue=4e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATB_FRAT1 (Q14K48)

Other databases:

- EMBL:   AM286280
- RefSeq:   YP_666228.1
- ProteinModelPortal:   Q14K48
- STRING:   Q14K48
- GeneID:   4199274
- GenomeReviews:   AM286280_GR
- KEGG:   ftf:FTF0021
- eggNOG:   COG0064
- HOGENOM:   HBG395951
- OMA:   LRYLGTC
- PhylomeDB:   Q14K48
- ProtClustDB:   PRK05477
- BioCyc:   FTUL393115:FTF0021-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00121
- InterPro:   IPR017959
- InterPro:   IPR018027
- InterPro:   IPR003789
- InterPro:   IPR023168
- InterPro:   IPR004413
- InterPro:   IPR006075
- InterPro:   IPR017958
- Gene3D:   G3DSA:1.10.10.410
- PANTHER:   PTHR11659
- SMART:   SM00845
- TIGRFAMs:   TIGR00133

Pfam domain/function: PF02934 GatB_N; PF02637 GatB_Yqey; SSF89095 GatB_Yqey

EC number: 6.3.5.-

Molecular weight: Translated: 52532; Mature: 52532

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS01234 GATB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIGLEVHIQLSTKSKLFSTSATKYGQHQNTQAAFLDLGLPGTLPVVNKEAIRKAVIFGL
CEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
AVDAKISKDSFFARKNYFYPDLSKGYQISQSTNPIVQEGRLEIETSKGLKTIRIERAHLE
EECCEECCCHHHHHCCCCCCCCCCCEEECCCCCCHHHCCCEEEECCCCCEEEEEEHHHHH
EDAGKSVHGYIAGETGLDYNRAGTPLLEIVTYPDFRSAEEVVAYLKKLHQLVKHLGICDG
HHCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCC
NMQEGSFRCDVNLSIRPQGQAKFGTRAELKNINSFRFIDKAIEYEYARQVSVLESGGEVV
CCCCCCEEEEEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
QETRLYDADANETRSMRAKEDAFDYRYFPDPDLLPLVITDEYIESIKKQMPLKSEEREAV
HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCHHHHHH
YREHLAEQEVEFLLSNLEIADYYDKVAVVIGYKPAYNWITVDLISTLNRAEKEFSSDVVP
HHHHHHHHHHHHHHHCCHHHHHHCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHCCCCC
AEILLEIIANVQKDIISQANAKKVIAEYIDAPSAIEAIIEKLGLKQVSDEGMIRELVQGI
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCHHHHHHHHHH
IAANPQQAADFKAGKTKLMSFFVGQAMKASKGKANPKQVNQIVQEELNK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MVIGLEVHIQLSTKSKLFSTSATKYGQHQNTQAAFLDLGLPGTLPVVNKEAIRKAVIFGL
CEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
AVDAKISKDSFFARKNYFYPDLSKGYQISQSTNPIVQEGRLEIETSKGLKTIRIERAHLE
EECCEECCCHHHHHCCCCCCCCCCCEEECCCCCCHHHCCCEEEECCCCCEEEEEEHHHHH
EDAGKSVHGYIAGETGLDYNRAGTPLLEIVTYPDFRSAEEVVAYLKKLHQLVKHLGICDG
HHCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCC
NMQEGSFRCDVNLSIRPQGQAKFGTRAELKNINSFRFIDKAIEYEYARQVSVLESGGEVV
CCCCCCEEEEEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
QETRLYDADANETRSMRAKEDAFDYRYFPDPDLLPLVITDEYIESIKKQMPLKSEEREAV
HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCHHHHHH
YREHLAEQEVEFLLSNLEIADYYDKVAVVIGYKPAYNWITVDLISTLNRAEKEFSSDVVP
HHHHHHHHHHHHHHHCCHHHHHHCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHCCCCC
AEILLEIIANVQKDIISQANAKKVIAEYIDAPSAIEAIIEKLGLKQVSDEGMIRELVQGI
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCHHHHHHHHHH
IAANPQQAADFKAGKTKLMSFFVGQAMKASKGKANPKQVNQIVQEELNK
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA