| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89257096
Identifier: 89257096
GI number: 89257096
Start: 1771250
End: 1772779
Strand: Direct
Name: 89257096
Synonym: FTL_1836
Alternate gene names: NA
Gene position: 1771250-1772779 (Clockwise)
Preceding gene: 89257095
Following gene: 89257097
Centisome position: 93.42
GC content: 33.92
Gene sequence:
>1530_bases ATGCTAAATAAAATTAATATAGTATTTATATGCTTTTTAGTATTATCAATTACCCCCTTTATGGGGTTTTCTAACAGTTT TAAAAACTCTAATGAACAATCGCAAAAATCAAACTCAATTGATAAGCAAGGTATAACCCAACTACAATCACAAATAGCAA ATATTCAAGCTGAAATAAATCATTTAACCCAAATAAAAAACTCAAATAATTCAGCACAATTTGCTACATACAGTTCAAAA GTCGAAAACATTGGTCTACCTAATAGCTTACCTGATAATAATAAATTAACTCTTGATATAATGACAAATATAGATTCTGA TAGTTCTATCATAAATCTAAGTGATTGCTCTATTGGTGGTATCTTTGACAAAGATGGTGGTATAAACGTTGGTGGTGCAC CTGCTATTACAACCCAAGGTGAGGTTACCTTCTTAGGAGCATACTCTGGTAACAATACTATACCTATAGGAATGATATCA AGTAACTTATTTGCCTCAACTGTAATAGGGTTAAGGAATAAGTTTGATAGTTATTCGATATTCTTTGGCGGTAAAATTGA AGCTGATGCGCAGCTTTGGTTTGGTAGTAGTACTATCTCAAATAAAGCAACAAACCTTGCTAGTAATGGTCAAAATATAT CACTAACCGCAACAAACTTATACTTTTTATCAAATGTTGGACATTATGTAACTGCAGAAATAGAATTTAACACTACTGAA CTTAATAATTTCTCTTTGGGTAACGCTTTTGTCATCTTTGGCAACCTTGATACTTCACCTTTTTTCTTAACTGCTGGAAG AAACAAACTCTCTGTAGGTGCGTTTGGTGGAGGTGGTCCATGGACAGGTGGAATAACAAAAAACTTCCTCTCTCCTGGTA AAGTGACAAATGTTTCACTAAACTATAAAAGCGATGTATGGAATGCTAATGTCGCTGTTTTTGGCTCTAACGATAACCAG TTTAATTTTTCAACTGGATTATTTTATGCACAAAAATGGACCCAAGATATAGCTGTCGGTTTTAATACTGGTTATGTTTA TAATATGGCAGGAGCTGGCAATCCCTCTTTAAGTAGGTTCTTACAGAGTCAGGGGCATCCTACCGATACCATTGGTAGTT TTAATGTCAATACAAATATTACCTATACTATTGCTGGTGGTTTCTTAAATTTAGGTGCTGGGTGGGCAACAACAACCAAT AAAAAAGACTTCACAGGCTCTGGTAAAGATGTTTTAGCTGGTGCATGGTATGCTGCCGCTAACTATTCACTTGTTTTTAG AGGTAGAAAAACCAACTTTGGAATATCATATGGTGAATCTTATAATTCAACAAATATCCCCATGACATTAACCGCTTCAC CACTTAACTTTGGGAGATCATCATCAGGGATACAAAAACAGATTATAGTTTCCGCACAACGCGCATATTTTGATAATAAT GTACTTTTTGGACCAGAATACTCATACCAACAACTATATAATGGTAAACATATGAATACTATTACAATAGATATGGCTGT ATATCTTTAA
Upstream 100 bases:
>100_bases AAAAGAGATAAATAATATTTTTTACCAAATAGTATTGATTATCATTATCATTTAATTTAATATCTAAAAATTAATTTATA TTCTTTGTTTCTTTCTTAAT
Downstream 100 bases:
>100_bases GTATTATTATTTATTTCTGTATATTTAACAATAATATAGAGGCTTAAATGGAAAATAGTTTATTAATCAGTAACTTTAAA CAATGGTTATTTTTAATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MLNKINIVFICFLVLSITPFMGFSNSFKNSNEQSQKSNSIDKQGITQLQSQIANIQAEINHLTQIKNSNNSAQFATYSSK VENIGLPNSLPDNNKLTLDIMTNIDSDSSIINLSDCSIGGIFDKDGGINVGGAPAITTQGEVTFLGAYSGNNTIPIGMIS SNLFASTVIGLRNKFDSYSIFFGGKIEADAQLWFGSSTISNKATNLASNGQNISLTATNLYFLSNVGHYVTAEIEFNTTE LNNFSLGNAFVIFGNLDTSPFFLTAGRNKLSVGAFGGGGPWTGGITKNFLSPGKVTNVSLNYKSDVWNANVAVFGSNDNQ FNFSTGLFYAQKWTQDIAVGFNTGYVYNMAGAGNPSLSRFLQSQGHPTDTIGSFNVNTNITYTIAGGFLNLGAGWATTTN KKDFTGSGKDVLAGAWYAAANYSLVFRGRKTNFGISYGESYNSTNIPMTLTASPLNFGRSSSGIQKQIIVSAQRAYFDNN VLFGPEYSYQQLYNGKHMNTITIDMAVYL
Sequences:
>Translated_509_residues MLNKINIVFICFLVLSITPFMGFSNSFKNSNEQSQKSNSIDKQGITQLQSQIANIQAEINHLTQIKNSNNSAQFATYSSK VENIGLPNSLPDNNKLTLDIMTNIDSDSSIINLSDCSIGGIFDKDGGINVGGAPAITTQGEVTFLGAYSGNNTIPIGMIS SNLFASTVIGLRNKFDSYSIFFGGKIEADAQLWFGSSTISNKATNLASNGQNISLTATNLYFLSNVGHYVTAEIEFNTTE LNNFSLGNAFVIFGNLDTSPFFLTAGRNKLSVGAFGGGGPWTGGITKNFLSPGKVTNVSLNYKSDVWNANVAVFGSNDNQ FNFSTGLFYAQKWTQDIAVGFNTGYVYNMAGAGNPSLSRFLQSQGHPTDTIGSFNVNTNITYTIAGGFLNLGAGWATTTN KKDFTGSGKDVLAGAWYAAANYSLVFRGRKTNFGISYGESYNSTNIPMTLTASPLNFGRSSSGIQKQIIVSAQRAYFDNN VLFGPEYSYQQLYNGKHMNTITIDMAVYL >Mature_509_residues MLNKINIVFICFLVLSITPFMGFSNSFKNSNEQSQKSNSIDKQGITQLQSQIANIQAEINHLTQIKNSNNSAQFATYSSK VENIGLPNSLPDNNKLTLDIMTNIDSDSSIINLSDCSIGGIFDKDGGINVGGAPAITTQGEVTFLGAYSGNNTIPIGMIS SNLFASTVIGLRNKFDSYSIFFGGKIEADAQLWFGSSTISNKATNLASNGQNISLTATNLYFLSNVGHYVTAEIEFNTTE LNNFSLGNAFVIFGNLDTSPFFLTAGRNKLSVGAFGGGGPWTGGITKNFLSPGKVTNVSLNYKSDVWNANVAVFGSNDNQ FNFSTGLFYAQKWTQDIAVGFNTGYVYNMAGAGNPSLSRFLQSQGHPTDTIGSFNVNTNITYTIAGGFLNLGAGWATTTN KKDFTGSGKDVLAGAWYAAANYSLVFRGRKTNFGISYGESYNSTNIPMTLTASPLNFGRSSSGIQKQIIVSAQRAYFDNN VLFGPEYSYQQLYNGKHMNTITIDMAVYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54865; Mature: 54865
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKINIVFICFLVLSITPFMGFSNSFKNSNEQSQKSNSIDKQGITQLQSQIANIQAEIN CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH HLTQIKNSNNSAQFATYSSKVENIGLPNSLPDNNKLTLDIMTNIDSDSSIINLSDCSIGG HHHHHCCCCCCEEEEEECCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCC IFDKDGGINVGGAPAITTQGEVTFLGAYSGNNTIPIGMISSNLFASTVIGLRNKFDSYSI EEECCCCCCCCCCCEEECCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCCCEEE FFGGKIEADAQLWFGSSTISNKATNLASNGQNISLTATNLYFLSNVGHYVTAEIEFNTTE EECCEEEECCEEEECCCCCCCCHHHHHCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEE LNNFSLGNAFVIFGNLDTSPFFLTAGRNKLSVGAFGGGGPWTGGITKNFLSPGKVTNVSL CCCEECCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHCCCCCEEEEEE NYKSDVWNANVAVFGSNDNQFNFSTGLFYAQKWTQDIAVGFNTGYVYNMAGAGNPSLSRF EECCCCCCCEEEEECCCCCEEEEECCEEEEECCCCEEEEEECCCEEEEECCCCCHHHHHH LQSQGHPTDTIGSFNVNTNITYTIAGGFLNLGAGWATTTNKKDFTGSGKDVLAGAWYAAA HHHCCCCCCCCEEEECCCEEEEEEECCEEECCCCEEECCCCCCCCCCCCHHEEEEEEEEC NYSLVFRGRKTNFGISYGESYNSTNIPMTLTASPLNFGRSSSGIQKQIIVSAQRAYFDNN CEEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEHHHCCCCC VLFGPEYSYQQLYNGKHMNTITIDMAVYL EEECCCCCHHHHHCCCCCEEEEEEEEEEC >Mature Secondary Structure MLNKINIVFICFLVLSITPFMGFSNSFKNSNEQSQKSNSIDKQGITQLQSQIANIQAEIN CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH HLTQIKNSNNSAQFATYSSKVENIGLPNSLPDNNKLTLDIMTNIDSDSSIINLSDCSIGG HHHHHCCCCCCEEEEEECCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCC IFDKDGGINVGGAPAITTQGEVTFLGAYSGNNTIPIGMISSNLFASTVIGLRNKFDSYSI EEECCCCCCCCCCCEEECCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCCCEEE FFGGKIEADAQLWFGSSTISNKATNLASNGQNISLTATNLYFLSNVGHYVTAEIEFNTTE EECCEEEECCEEEECCCCCCCCHHHHHCCCCEEEEEEEEEEEEECCCCEEEEEEEEEEEE LNNFSLGNAFVIFGNLDTSPFFLTAGRNKLSVGAFGGGGPWTGGITKNFLSPGKVTNVSL CCCEECCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHCCCCCEEEEEE NYKSDVWNANVAVFGSNDNQFNFSTGLFYAQKWTQDIAVGFNTGYVYNMAGAGNPSLSRF EECCCCCCCEEEEECCCCCEEEEECCEEEEECCCCEEEEEECCCEEEEECCCCCHHHHHH LQSQGHPTDTIGSFNVNTNITYTIAGGFLNLGAGWATTTNKKDFTGSGKDVLAGAWYAAA HHHCCCCCCCCEEEECCCEEEEEEECCEEECCCCEEECCCCCCCCCCCCHHEEEEEEEEC NYSLVFRGRKTNFGISYGESYNSTNIPMTLTASPLNFGRSSSGIQKQIIVSAQRAYFDNN CEEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEHHHCCCCC VLFGPEYSYQQLYNGKHMNTITIDMAVYL EEECCCCCHHHHHCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA