| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89257029
Identifier: 89257029
GI number: 89257029
Start: 1694792
End: 1695319
Strand: Reverse
Name: 89257029
Synonym: FTL_1760
Alternate gene names: NA
Gene position: 1695319-1694792 (Counterclockwise)
Preceding gene: 89257030
Following gene: 89257028
Centisome position: 89.42
GC content: 33.52
Gene sequence:
>528_bases ATGCAAAAGCTATGCCATATTGTTGCTGTGGCAAAAAGTTACAATGCTATTTCAATAGATTTGCATACAATGTCTAGCTA CTCTCCAAATATAGTACAGGAGAGATACTCTGAAGCCGTAATAGAAACTCCAGACACACTAAATGAGTATATACAGTTAT ATAAGAATGCTCATAAAGATGGTGAAAAAAGAGTCACAGAGCTTTTTACTGGAGATACACGTAATGGTATATTTGCATCT AAAGTATTTGAATCGTTATCTTATGAACTACAACAAATTGGAGTTGAGGTTGAGTATGATAAACCTTATATCCTTGCTGA GCACTTAGTGGCACATTATCTTGTTTGTGAATTAGAGGCGGTATGTATTGATATACCTAAGGATCTTTTATTCAAAACAA CAACAGCTGATGAGCTCTATGATATAGCTAGTCTAGAAATAGATCACACTAAGTTAAATCTGATGGCAGAAGCTTTTGCT AAAGCTATTATGAACACACAAAAACAAAAACAATTAAAGGATGCATAA
Upstream 100 bases:
>100_bases AGATGCTGGAAGGCTATATCCTAATTGTCTAAGAAATATTGTCGATTATGATCAGCACCCACAATTAAAATAAGCACTTA TCAAGCTATATGATCAATAT
Downstream 100 bases:
>100_bases CATATGACTAAAAAGACAACAAATGCTATTTCTGAGAGAATTTGGGGTAAAAAAGCTATCCATATACCAAATACTACTGA TATATATGGGGCTGATCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MQKLCHIVAVAKSYNAISIDLHTMSSYSPNIVQERYSEAVIETPDTLNEYIQLYKNAHKDGEKRVTELFTGDTRNGIFAS KVFESLSYELQQIGVEVEYDKPYILAEHLVAHYLVCELEAVCIDIPKDLLFKTTTADELYDIASLEIDHTKLNLMAEAFA KAIMNTQKQKQLKDA
Sequences:
>Translated_175_residues MQKLCHIVAVAKSYNAISIDLHTMSSYSPNIVQERYSEAVIETPDTLNEYIQLYKNAHKDGEKRVTELFTGDTRNGIFAS KVFESLSYELQQIGVEVEYDKPYILAEHLVAHYLVCELEAVCIDIPKDLLFKTTTADELYDIASLEIDHTKLNLMAEAFA KAIMNTQKQKQLKDA >Mature_175_residues MQKLCHIVAVAKSYNAISIDLHTMSSYSPNIVQERYSEAVIETPDTLNEYIQLYKNAHKDGEKRVTELFTGDTRNGIFAS KVFESLSYELQQIGVEVEYDKPYILAEHLVAHYLVCELEAVCIDIPKDLLFKTTTADELYDIASLEIDHTKLNLMAEAFA KAIMNTQKQKQLKDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19910; Mature: 19910
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLCHIVAVAKSYNAISIDLHTMSSYSPNIVQERYSEAVIETPDTLNEYIQLYKNAHKD CHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC GEKRVTELFTGDTRNGIFASKVFESLSYELQQIGVEVEYDKPYILAEHLVAHYLVCELEA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHH VCIDIPKDLLFKTTTADELYDIASLEIDHTKLNLMAEAFAKAIMNTQKQKQLKDA HHHCCCHHHHEECCCHHHHHHHHHCEECHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQKLCHIVAVAKSYNAISIDLHTMSSYSPNIVQERYSEAVIETPDTLNEYIQLYKNAHKD CHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC GEKRVTELFTGDTRNGIFASKVFESLSYELQQIGVEVEYDKPYILAEHLVAHYLVCELEA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHH VCIDIPKDLLFKTTTADELYDIASLEIDHTKLNLMAEAFAKAIMNTQKQKQLKDA HHHCCCHHHHEECCCHHHHHHHHHCEECHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA