| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256748
Identifier: 89256748
GI number: 89256748
Start: 1384395
End: 1385423
Strand: Direct
Name: 89256748
Synonym: FTL_1459
Alternate gene names: NA
Gene position: 1384395-1385423 (Clockwise)
Preceding gene: 89256743
Following gene: 89256749
Centisome position: 73.02
GC content: 29.54
Gene sequence:
>1029_bases ATGAGACATTTATACTTCAACTTAGTATCTACAATAATGCTTGTTCTAGCAACATCTAGTTGCTCTACTGGGATACCGGA AAATAGCAAAAATATAAAGAATCAAGTTGTAATAAACCAACAATCACAAAAAGATACTCCAAATGATACCGTACCAGTTT GGTTTAGTTCAGGTCAACCAAATACAGATCAATTATTGTATGGCTTTGGGGCTGCAAAAAGCCTTGAAAAAGCAACACAA AAGGCTCTTGCTGATATGGTTCAAAAGCTTCAAGTTACAGTATCAACAACAACTAACTTTACGAATGTTACAACTAATGA CAAAGTTTCCCAAAAACTAACTCAACAAATCACTACCACAACTACTCAAATAACTATTCCTAACTACAAGGTAATCAATC AGTCAGAACTTAACCAAATATTCTATGTCGAAGTCCAAACCAATAAGGAACAAACTATAAATGATTTAAAAAAACTTATT AACAGCAATATTAATCAAGCTCAGCAGTTACTTACAACGACAAACAATAAAAGTTCACTTTATAGATTTGCTATAGCTCA GCAGGTTACTAAAAACATACAACTTATAAATAGTAGTTTGAGAACATTAATAATCTTAGTACCTGATAGCAATATTAATA GCCAAATTGAGATATTAAACCAAATTGATAACGAGCTCTTAAATCTCAAAAGGGGTTTACAGATATATATTGATAAACAA AATAGTGGTTTTTTTTATAATTCGCTAGAAAAATTTTTACAGGTAAATAACTATACCATTACAGATAAAAAAGATTTAGC TAATATAAATATAACGCTAAAACTTAAATATTATGACAATAAATTTAATAGTAATGAGTATTGCATTGAAACAAAAATAG AACTTCAAGCATTAGATGACTCATCTAATCAATTATCACCGAAACAATACACTATCAAAGTTTGCTCAAAGCAAGGAAGA TTAGCTGCTATAGACAAAGCCGTAGAAATATTCTATTCTCAACTAAATGATGCAGAGAGTATATATTAA
Upstream 100 bases:
>100_bases TATAAATATAATACTCTGAAGATACATTATATAGAGTTTATAAGAAATTTAAATTAAGATAGAGCTATTAATTATAAGAA TTATATTTCAACTCATCAAA
Downstream 100 bases:
>100_bases AAAATGACTATAAAAATCTTTCCAGAAAAAGTTGCTAATATCCCGACACATACAACGAGAAAGAAAATAACCAATACAAC ATATGCTAGCAAACAACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MRHLYFNLVSTIMLVLATSSCSTGIPENSKNIKNQVVINQQSQKDTPNDTVPVWFSSGQPNTDQLLYGFGAAKSLEKATQ KALADMVQKLQVTVSTTTNFTNVTTNDKVSQKLTQQITTTTTQITIPNYKVINQSELNQIFYVEVQTNKEQTINDLKKLI NSNINQAQQLLTTTNNKSSLYRFAIAQQVTKNIQLINSSLRTLIILVPDSNINSQIEILNQIDNELLNLKRGLQIYIDKQ NSGFFYNSLEKFLQVNNYTITDKKDLANINITLKLKYYDNKFNSNEYCIETKIELQALDDSSNQLSPKQYTIKVCSKQGR LAAIDKAVEIFYSQLNDAESIY
Sequences:
>Translated_342_residues MRHLYFNLVSTIMLVLATSSCSTGIPENSKNIKNQVVINQQSQKDTPNDTVPVWFSSGQPNTDQLLYGFGAAKSLEKATQ KALADMVQKLQVTVSTTTNFTNVTTNDKVSQKLTQQITTTTTQITIPNYKVINQSELNQIFYVEVQTNKEQTINDLKKLI NSNINQAQQLLTTTNNKSSLYRFAIAQQVTKNIQLINSSLRTLIILVPDSNINSQIEILNQIDNELLNLKRGLQIYIDKQ NSGFFYNSLEKFLQVNNYTITDKKDLANINITLKLKYYDNKFNSNEYCIETKIELQALDDSSNQLSPKQYTIKVCSKQGR LAAIDKAVEIFYSQLNDAESIY >Mature_342_residues MRHLYFNLVSTIMLVLATSSCSTGIPENSKNIKNQVVINQQSQKDTPNDTVPVWFSSGQPNTDQLLYGFGAAKSLEKATQ KALADMVQKLQVTVSTTTNFTNVTTNDKVSQKLTQQITTTTTQITIPNYKVINQSELNQIFYVEVQTNKEQTINDLKKLI NSNINQAQQLLTTTNNKSSLYRFAIAQQVTKNIQLINSSLRTLIILVPDSNINSQIEILNQIDNELLNLKRGLQIYIDKQ NSGFFYNSLEKFLQVNNYTITDKKDLANINITLKLKYYDNKFNSNEYCIETKIELQALDDSSNQLSPKQYTIKVCSKQGR LAAIDKAVEIFYSQLNDAESIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38787; Mature: 38787
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHLYFNLVSTIMLVLATSSCSTGIPENSKNIKNQVVINQQSQKDTPNDTVPVWFSSGQP CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCC NTDQLLYGFGAAKSLEKATQKALADMVQKLQVTVSTTTNFTNVTTNDKVSQKLTQQITTT CCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEECCCEEECCCCHHHHHHHHHHHHHC TTQITIPNYKVINQSELNQIFYVEVQTNKEQTINDLKKLINSNINQAQQLLTTTNNKSSL EEEEEECCEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHH YRFAIAQQVTKNIQLINSSLRTLIILVPDSNINSQIEILNQIDNELLNLKRGLQIYIDKQ HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEC NSGFFYNSLEKFLQVNNYTITDKKDLANINITLKLKYYDNKFNSNEYCIETKIELQALDD CCCCHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEECC SSNQLSPKQYTIKVCSKQGRLAAIDKAVEIFYSQLNDAESIY CCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRHLYFNLVSTIMLVLATSSCSTGIPENSKNIKNQVVINQQSQKDTPNDTVPVWFSSGQP CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCC NTDQLLYGFGAAKSLEKATQKALADMVQKLQVTVSTTTNFTNVTTNDKVSQKLTQQITTT CCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEECCCEEECCCCHHHHHHHHHHHHHC TTQITIPNYKVINQSELNQIFYVEVQTNKEQTINDLKKLINSNINQAQQLLTTTNNKSSL EEEEEECCEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHH YRFAIAQQVTKNIQLINSSLRTLIILVPDSNINSQIEILNQIDNELLNLKRGLQIYIDKQ HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEC NSGFFYNSLEKFLQVNNYTITDKKDLANINITLKLKYYDNKFNSNEYCIETKIELQALDD CCCCHHHHHHHHHHHCCEEEECCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEECC SSNQLSPKQYTIKVCSKQGRLAAIDKAVEIFYSQLNDAESIY CCCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA