| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256667
Identifier: 89256667
GI number: 89256667
Start: 1300042
End: 1300608
Strand: Direct
Name: 89256667
Synonym: FTL_1368
Alternate gene names: NA
Gene position: 1300042-1300608 (Clockwise)
Preceding gene: 89256666
Following gene: 89256668
Centisome position: 68.57
GC content: 29.63
Gene sequence:
>567_bases ATGATAAATACAGCTATCAAAAAAGATCTAGAAAACATAGTAACTAATCTAGACAAAATTGACTTAACTCAACACGCTTT AGTCAATGATTCAAATAACCATATGATTAAAAAAGTTATTAAAAAAATCAACAGTTTAGTTTATAGTTATCAAAAGTTGC TCTATAACTCTAACAATATTAACGATACAGAATCATCCTACACCTTCATAAATTACACAAATCCAGCTATTACTATTATT GCTATTTCTAGGACGATTCTTCTATTACTGTGTATGTATTTAGTTTGGATACACGTTAATGGTAACTCAAGTATACTAAT GATGATATATCCATGTCTGTTATCACAATTATTTACTGCAGTTCCAAATCCAGCCGATATGGTAAGAAATGTCGTAGTTG GTCTATTTCTGTCAATACCTATTAGTATCTTTATAACCTTGAATCTATTATCACAAGTAGTTGGTTACTTTGAGCTATTG ATATTAGTTTTGCTAGGGACTTTATCGTTAGGAATAGCTATTTTAGCGTTACCTAAATACCAAACATACAGCCTAGGATT CTTATAG
Upstream 100 bases:
>100_bases ATGAAAATATAGCTAAAACAAACTATGCTGCCTTTTCAAATAAAGTAGTCGAACTAATCCAATCTGTTCATTTTTTGAGA AAAAATCTAGCAAAAAAAAG
Downstream 100 bases:
>100_bases GCTTTATCTCAATAGTACAAGCCTAGTAACCACATGGATTTTGAAGTAGCAAAATCTATTACCATCGGAATGAGCACTAT AGTTGGTTCTATCGGACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MINTAIKKDLENIVTNLDKIDLTQHALVNDSNNHMIKKVIKKINSLVYSYQKLLYNSNNINDTESSYTFINYTNPAITII AISRTILLLLCMYLVWIHVNGNSSILMMIYPCLLSQLFTAVPNPADMVRNVVVGLFLSIPISIFITLNLLSQVVGYFELL ILVLLGTLSLGIAILALPKYQTYSLGFL
Sequences:
>Translated_188_residues MINTAIKKDLENIVTNLDKIDLTQHALVNDSNNHMIKKVIKKINSLVYSYQKLLYNSNNINDTESSYTFINYTNPAITII AISRTILLLLCMYLVWIHVNGNSSILMMIYPCLLSQLFTAVPNPADMVRNVVVGLFLSIPISIFITLNLLSQVVGYFELL ILVLLGTLSLGIAILALPKYQTYSLGFL >Mature_188_residues MINTAIKKDLENIVTNLDKIDLTQHALVNDSNNHMIKKVIKKINSLVYSYQKLLYNSNNINDTESSYTFINYTNPAITII AISRTILLLLCMYLVWIHVNGNSSILMMIYPCLLSQLFTAVPNPADMVRNVVVGLFLSIPISIFITLNLLSQVVGYFELL ILVLLGTLSLGIAILALPKYQTYSLGFL
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21100; Mature: 21100
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINTAIKKDLENIVTNLDKIDLTQHALVNDSNNHMIKKVIKKINSLVYSYQKLLYNSNNI CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC NDTESSYTFINYTNPAITIIAISRTILLLLCMYLVWIHVNGNSSILMMIYPCLLSQLFTA CCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHH VPNPADMVRNVVVGLFLSIPISIFITLNLLSQVVGYFELLILVLLGTLSLGIAILALPKY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QTYSLGFL CCCCCCCC >Mature Secondary Structure MINTAIKKDLENIVTNLDKIDLTQHALVNDSNNHMIKKVIKKINSLVYSYQKLLYNSNNI CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC NDTESSYTFINYTNPAITIIAISRTILLLLCMYLVWIHVNGNSSILMMIYPCLLSQLFTA CCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHH VPNPADMVRNVVVGLFLSIPISIFITLNLLSQVVGYFELLILVLLGTLSLGIAILALPKY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QTYSLGFL CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA