| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is map [H]
Identifier: 89255869
GI number: 89255869
Start: 433260
End: 434030
Strand: Direct
Name: map [H]
Synonym: FTL_0459
Alternate gene names: 89255869
Gene position: 433260-434030 (Clockwise)
Preceding gene: 89255865
Following gene: 89255870
Centisome position: 22.85
GC content: 36.32
Gene sequence:
>771_bases ATGAGTCAAATAATAATAAAAACTTCTCAAGAAATAGAAAAGATGCGCGTTGCTGGTAGACTAGCAGCAGAAGTTTTAGA GATGATTACTCCTTTTGTTAAAGAAGGAGTTACAACCGCAGAGCTTGATAAAATTTGTCATGAATATATAGTCAAAGAGC AAGATGCATATCCAGCGCCGCTTAATTACCATGGGTTTCCTAAATCAATTTGTACTTCAATAAATCATGTTGTTTGTCAT GGAATTCCAGCTGATAAGAAGCTTAAAAATGGTGATATATTAAATATCGATATTACAGTTAAAAAAGATGGCTATCATGG TGATACAAGTAAGATGTTTATGATAGGTGAGCCATCAGTCATGGCTAAAAAACTAGTAGAAGTTACTCATGAATGCTTAT GGAAAGGTATAGAAGTAGTTAAACCTGGCAATCATTTTGGCGATATCGGCGCAGCTATAGAAAAGCATGCTAAGAAGTTT GGTTATTCGATAGTTGATGCTTTTTGTGGCCATGGGATAGGTGCTAATTTCCATGAACCACCGCATGTTATGCATCATGG TAAAGCTGGTATAGGCGCAATGTTTGAAGAAGGAATGATATTTACAATCGAACCGATGATAAATATCGGTAAAAGAGCAG TGTCAGTGCTAAAAGATGGTTGGACTGCTGTTACAAAAGACCGTTCACTCTCAGCACAGTGGGAGCATACAATTTTGGTT ACAAAAGATGGTTATGAAGTCCTAACACTAAGAGAAGAAGAAAAAAACTAG
Upstream 100 bases:
>100_bases AATTTGCAATAATTTTAACATCCTTTTGTAAGATCTATATATTCATAAACTGATGGTTTATAATGTATGATTAGATTTTA TTAAAAAATACTGATTACAG
Downstream 100 bases:
>100_bases TATGCCAAAACAAGTAACTCAAAAACTGGTAAATCAAAAGTGTGATCTTTTAAGATCTCAAAATGAAGAGATTACTGTCA GTAAAGTTAGAAAGCTGATT
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSQIIIKTSQEIEKMRVAGRLAAEVLEMITPFVKEGVTTAELDKICHEYIVKEQDAYPAPLNYHGFPKSICTSINHVVCH GIPADKKLKNGDILNIDITVKKDGYHGDTSKMFMIGEPSVMAKKLVEVTHECLWKGIEVVKPGNHFGDIGAAIEKHAKKF GYSIVDAFCGHGIGANFHEPPHVMHHGKAGIGAMFEEGMIFTIEPMINIGKRAVSVLKDGWTAVTKDRSLSAQWEHTILV TKDGYEVLTLREEEKN
Sequences:
>Translated_256_residues MSQIIIKTSQEIEKMRVAGRLAAEVLEMITPFVKEGVTTAELDKICHEYIVKEQDAYPAPLNYHGFPKSICTSINHVVCH GIPADKKLKNGDILNIDITVKKDGYHGDTSKMFMIGEPSVMAKKLVEVTHECLWKGIEVVKPGNHFGDIGAAIEKHAKKF GYSIVDAFCGHGIGANFHEPPHVMHHGKAGIGAMFEEGMIFTIEPMINIGKRAVSVLKDGWTAVTKDRSLSAQWEHTILV TKDGYEVLTLREEEKN >Mature_255_residues SQIIIKTSQEIEKMRVAGRLAAEVLEMITPFVKEGVTTAELDKICHEYIVKEQDAYPAPLNYHGFPKSICTSINHVVCHG IPADKKLKNGDILNIDITVKKDGYHGDTSKMFMIGEPSVMAKKLVEVTHECLWKGIEVVKPGNHFGDIGAAIEKHAKKFG YSIVDAFCGHGIGANFHEPPHVMHHGKAGIGAMFEEGMIFTIEPMINIGKRAVSVLKDGWTAVTKDRSLSAQWEHTILVT KDGYEVLTLREEEKN
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=250, Percent_Identity=48.4, Blast_Score=251, Evalue=4e-67, Organism=Homo sapiens, GI40385867, Length=247, Percent_Identity=44.1295546558704, Blast_Score=213, Evalue=1e-55, Organism=Escherichia coli, GI1786364, Length=252, Percent_Identity=59.5238095238095, Blast_Score=322, Evalue=1e-89, Organism=Escherichia coli, GI1788728, Length=252, Percent_Identity=24.2063492063492, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71996291, Length=254, Percent_Identity=46.8503937007874, Blast_Score=233, Evalue=7e-62, Organism=Saccharomyces cerevisiae, GI6323273, Length=255, Percent_Identity=44.3137254901961, Blast_Score=228, Evalue=7e-61, Organism=Drosophila melanogaster, GI21355531, Length=252, Percent_Identity=48.015873015873, Blast_Score=246, Evalue=1e-65, Organism=Drosophila melanogaster, GI24583427, Length=244, Percent_Identity=47.1311475409836, Blast_Score=239, Evalue=2e-63,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 28392; Mature: 28261
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIIIKTSQEIEKMRVAGRLAAEVLEMITPFVKEGVTTAELDKICHEYIVKEQDAYPAP CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC LNYHGFPKSICTSINHVVCHGIPADKKLKNGDILNIDITVKKDGYHGDTSKMFMIGEPSV CCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCHH MAKKLVEVTHECLWKGIEVVKPGNHFGDIGAAIEKHAKKFGYSIVDAFCGHGIGANFHEP HHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PHVMHHGKAGIGAMFEEGMIFTIEPMINIGKRAVSVLKDGWTAVTKDRSLSAQWEHTILV CHHHHCCCCCHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEE TKDGYEVLTLREEEKN ECCCCEEEEEECCCCC >Mature Secondary Structure SQIIIKTSQEIEKMRVAGRLAAEVLEMITPFVKEGVTTAELDKICHEYIVKEQDAYPAP CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC LNYHGFPKSICTSINHVVCHGIPADKKLKNGDILNIDITVKKDGYHGDTSKMFMIGEPSV CCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCHH MAKKLVEVTHECLWKGIEVVKPGNHFGDIGAAIEKHAKKFGYSIVDAFCGHGIGANFHEP HHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PHVMHHGKAGIGAMFEEGMIFTIEPMINIGKRAVSVLKDGWTAVTKDRSLSAQWEHTILV CHHHHCCCCCHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEE TKDGYEVLTLREEEKN ECCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]