Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

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The map label for this gene is 89255801

Identifier: 89255801

GI number: 89255801

Start: 359970

End: 361055

Strand: Reverse

Name: 89255801

Synonym: FTL_0390

Alternate gene names: NA

Gene position: 361055-359970 (Counterclockwise)

Preceding gene: 89255802

Following gene: 89255798

Centisome position: 19.04

GC content: 36.1

Gene sequence:

>1086_bases
ATGGTTATAAAAAAAGATGTCCAATCTTATTTTATTGTGCATGGTGTCTCAACCCAAGAACAGTTAGAAAATTATGATGT
CACAGATCATGCTGATGTTGGTAGCGATACTACTAGCGTAATGAGTAATATAGTAGGTCATAACGGTAGAATAGTTGGTG
TAAGCACGATCAAAGGCACAACTTACCAAATAGCTCTGACTCCAAGGATAGAGGGTGGTACATTCAACTGGACATGCTCT
ATTTCAATAGTTGAACAAGACGCTAGCTTTGATAATAGTTATAATGGTCAAGTCTTCTTTGGATTTATTGATAATAATAG
TAGCTCATATGCCGCTCCAAGCAGTAGTATGCTACCAAGAGGTTGTAATGCTACAGATAGCAACCAAAATACTGATTTCG
AAGCATATAGATCAGAAAGACAGACACTAGATACAGAGCTTATAAATAGTCACAACCAAGCTCTAAACGCATGGCAACAA
CGTACAGCTATCGCTGCGGCTCAAGACCAAGACTATAGTGATTTAAAAAATAATATGGATGCTGCTGAAATTAGAGCTGA
TACTGCATTTAGTGATTATAACAAATACCAAGATATCGCTAATTATCAAAGTACTATTGATCACTATCAAGGACTTATTA
ATAATGCTACAAGTGATGACGATATTGCACAATATGAAAGCGCTATTCAACACTATCGAGGTCTAATAGATAGTGTCCAA
TCTTCACTATCTAGTCAAGCTGGCAATGATTATAGCAACGCTCAAGAAGCTGCTACTTTCTTTAATCAACAGCGCGATAT
CTATAACCAAAATAGAGAAAGTGCTAATACGCGATATACTGAGCTACAAGACCAGCAGAGAAACGTATCAAGCTCGATTA
ATGGTAATACTAGCCAAGGCTTTGATAATGACTACAATAGTGCATATGAGCAATATAATAACGCAATGGATTCACTACAA
TCTAGTCTTAACAACTCAGCAGTAAATGTCGATAGAGTTGATACTTATCAGGGTGAAGACTATAATGCTCATAACTTTGG
TCAAATTAGTGATAAGTTTAACTCTTGGCAATATCGTAATATTTAG

Upstream 100 bases:

>100_bases
GTTGTTATAGCTATTATAGGCATTTTGTCGATACTAGTTATCCCAGCGTATTCAAACTATGTCACTAGAACAAGATTGAC
AGAAGCCTTGACAGTTTTAG

Downstream 100 bases:

>100_bases
CTAATCAATAGCCAGTAGCCTAGTGGTTAGTATTTATGTTTATTTTAGATGATTTTTAAATCTAGTTGGCTGAGTAATAA
AGTCGAAGACTCATTTTACT

Product: Type IV pili fiber building block protein

Products: NA

Alternate protein names: Type IV Pili Pilus Assembly Protein

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MVIKKDVQSYFIVHGVSTQEQLENYDVTDHADVGSDTTSVMSNIVGHNGRIVGVSTIKGTTYQIALTPRIEGGTFNWTCS
ISIVEQDASFDNSYNGQVFFGFIDNNSSSYAAPSSSMLPRGCNATDSNQNTDFEAYRSERQTLDTELINSHNQALNAWQQ
RTAIAAAQDQDYSDLKNNMDAAEIRADTAFSDYNKYQDIANYQSTIDHYQGLINNATSDDDIAQYESAIQHYRGLIDSVQ
SSLSSQAGNDYSNAQEAATFFNQQRDIYNQNRESANTRYTELQDQQRNVSSSINGNTSQGFDNDYNSAYEQYNNAMDSLQ
SSLNNSAVNVDRVDTYQGEDYNAHNFGQISDKFNSWQYRNI

Sequences:

>Translated_361_residues
MVIKKDVQSYFIVHGVSTQEQLENYDVTDHADVGSDTTSVMSNIVGHNGRIVGVSTIKGTTYQIALTPRIEGGTFNWTCS
ISIVEQDASFDNSYNGQVFFGFIDNNSSSYAAPSSSMLPRGCNATDSNQNTDFEAYRSERQTLDTELINSHNQALNAWQQ
RTAIAAAQDQDYSDLKNNMDAAEIRADTAFSDYNKYQDIANYQSTIDHYQGLINNATSDDDIAQYESAIQHYRGLIDSVQ
SSLSSQAGNDYSNAQEAATFFNQQRDIYNQNRESANTRYTELQDQQRNVSSSINGNTSQGFDNDYNSAYEQYNNAMDSLQ
SSLNNSAVNVDRVDTYQGEDYNAHNFGQISDKFNSWQYRNI
>Mature_361_residues
MVIKKDVQSYFIVHGVSTQEQLENYDVTDHADVGSDTTSVMSNIVGHNGRIVGVSTIKGTTYQIALTPRIEGGTFNWTCS
ISIVEQDASFDNSYNGQVFFGFIDNNSSSYAAPSSSMLPRGCNATDSNQNTDFEAYRSERQTLDTELINSHNQALNAWQQ
RTAIAAAQDQDYSDLKNNMDAAEIRADTAFSDYNKYQDIANYQSTIDHYQGLINNATSDDDIAQYESAIQHYRGLIDSVQ
SSLSSQAGNDYSNAQEAATFFNQQRDIYNQNRESANTRYTELQDQQRNVSSSINGNTSQGFDNDYNSAYEQYNNAMDSLQ
SSLNNSAVNVDRVDTYQGEDYNAHNFGQISDKFNSWQYRNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40448; Mature: 40448

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIKKDVQSYFIVHGVSTQEQLENYDVTDHADVGSDTTSVMSNIVGHNGRIVGVSTIKGT
CCCHHHHHHEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCC
TYQIALTPRIEGGTFNWTCSISIVEQDASFDNSYNGQVFFGFIDNNSSSYAAPSSSMLPR
EEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
GCNATDSNQNTDFEAYRSERQTLDTELINSHNQALNAWQQRTAIAAAQDQDYSDLKNNMD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
AAEIRADTAFSDYNKYQDIANYQSTIDHYQGLINNATSDDDIAQYESAIQHYRGLIDSVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
SSLSSQAGNDYSNAQEAATFFNQQRDIYNQNRESANTRYTELQDQQRNVSSSINGNTSQG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCC
FDNDYNSAYEQYNNAMDSLQSSLNNSAVNVDRVDTYQGEDYNAHNFGQISDKFNSWQYRN
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEECCC
I
C
>Mature Secondary Structure
MVIKKDVQSYFIVHGVSTQEQLENYDVTDHADVGSDTTSVMSNIVGHNGRIVGVSTIKGT
CCCHHHHHHEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCC
TYQIALTPRIEGGTFNWTCSISIVEQDASFDNSYNGQVFFGFIDNNSSSYAAPSSSMLPR
EEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
GCNATDSNQNTDFEAYRSERQTLDTELINSHNQALNAWQQRTAIAAAQDQDYSDLKNNMD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
AAEIRADTAFSDYNKYQDIANYQSTIDHYQGLINNATSDDDIAQYESAIQHYRGLIDSVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
SSLSSQAGNDYSNAQEAATFFNQQRDIYNQNRESANTRYTELQDQQRNVSSSINGNTSQG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCC
FDNDYNSAYEQYNNAMDSLQSSLNNSAVNVDRVDTYQGEDYNAHNFGQISDKFNSWQYRN
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCEECCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA