Click here to switch to the map view.

The map label for this gene is gpsA [H]

Identifier: 89255786

GI number: 89255786

Start: 344351

End: 345349

Strand: Direct

Name: gpsA [H]

Synonym: FTL_0372

Alternate gene names: 89255786

Gene position: 344351-345349 (Clockwise)

Preceding gene: 89255785

Following gene: 89255794

Centisome position: 18.16

GC content: 35.94

Gene sequence:

>999_bases
ATGCAAAAAAATATACTTGTTTTAGGGGCAGGAGCTTGGGGTACGGCACTAGCATTACAGCTTGCTTATAGAGGACATAA
TGTCAGAATTAACTCATGGAAAGCTGAGCATAATGAACAAATGCTAAAGGATAATAACAATCATAAATACCTACCGAGTA
TAGAGAAATTTCCTTCTAGATTAAAAGCTATTCAAGATTGGCAAGCTAATATCATTGAGTTTGATAGTATATTAGTTGCA
ACTCCAAGCTCTGGTTTTAAGAATACTATTTTAGAGCTAAAAGAATGTATCTTACCGCAGCAAAACATTATTAGTGCAAC
AAAAGGTTTTTGTCATGATAGTTATGCGTTATTAAGTGAAATAGCTGAAGATATTTTGCCAACTACAAAATTTGCGTTAT
TAACAGGACCAAGCTTTGCTAAAGAGTTAGCTAATCAGCTCCCAACAGCTGTAGTAGTAGCCTCAAAAGATATTAATTAT
GCACGTTATGTCCAAGAGCTTTTCAGTAATGAGAATTTTAGATGCTACACAACAACTGATATCATCGGTGCTCAAGTTGG
CGGTGCTGTCAAAAATGTTCTAGCAATCACAGCTGGGATTGCTGCAGGTATGGAGTTTGGTGTTAATGCTCATGCCGCTC
TTATTACTCGTGGTCTAGCAGAGATAAAGAAACTTGGGCTTAAACTAGGTGCAAACTCAGAAACTTTTATTGGACTTAGC
TGTTTAGGGGATTTATTGTTGACATGTTCGGACAATCAGTCGCGCAATCGTAGATTTGGACTATATTTGGGGCAGGGTAT
GACTATACAACAAGCATTAAAAGAGGTAAATAATGTTGTTGAAGGCTATTTCACTGCAAAAGCTGTTTATAACTTTGCTA
AAAAACATAATGTTGAGATGCCTTTAGTATTTGCTACTTATAGAATTTTGTATGAAGCCGCTGATCCTAGAGATATCGTC
AAAGAACTTATGACTCGTCAGCTAAAAAATGAAAATTAA

Upstream 100 bases:

>100_bases
GATTTTATTGTGTCGATAAATAAAAGTTATATTAAAGAGGTGTTTACACTTTGGCAACTATAGAATATATTAGAACTAAA
AGAGTCGACAAATTTAGTTT

Downstream 100 bases:

>100_bases
TTAGCCACCTGCGACCTGTTTAGGTACATAATCTTTAAGATTAGTTTGTTGCATTTTCACTTTAGTATTAAAAGCATAAT
CACCGACCTTTACAAGAGGC

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MQKNILVLGAGAWGTALALQLAYRGHNVRINSWKAEHNEQMLKDNNNHKYLPSIEKFPSRLKAIQDWQANIIEFDSILVA
TPSSGFKNTILELKECILPQQNIISATKGFCHDSYALLSEIAEDILPTTKFALLTGPSFAKELANQLPTAVVVASKDINY
ARYVQELFSNENFRCYTTTDIIGAQVGGAVKNVLAITAGIAAGMEFGVNAHAALITRGLAEIKKLGLKLGANSETFIGLS
CLGDLLLTCSDNQSRNRRFGLYLGQGMTIQQALKEVNNVVEGYFTAKAVYNFAKKHNVEMPLVFATYRILYEAADPRDIV
KELMTRQLKNEN

Sequences:

>Translated_332_residues
MQKNILVLGAGAWGTALALQLAYRGHNVRINSWKAEHNEQMLKDNNNHKYLPSIEKFPSRLKAIQDWQANIIEFDSILVA
TPSSGFKNTILELKECILPQQNIISATKGFCHDSYALLSEIAEDILPTTKFALLTGPSFAKELANQLPTAVVVASKDINY
ARYVQELFSNENFRCYTTTDIIGAQVGGAVKNVLAITAGIAAGMEFGVNAHAALITRGLAEIKKLGLKLGANSETFIGLS
CLGDLLLTCSDNQSRNRRFGLYLGQGMTIQQALKEVNNVVEGYFTAKAVYNFAKKHNVEMPLVFATYRILYEAADPRDIV
KELMTRQLKNEN
>Mature_332_residues
MQKNILVLGAGAWGTALALQLAYRGHNVRINSWKAEHNEQMLKDNNNHKYLPSIEKFPSRLKAIQDWQANIIEFDSILVA
TPSSGFKNTILELKECILPQQNIISATKGFCHDSYALLSEIAEDILPTTKFALLTGPSFAKELANQLPTAVVVASKDINY
ARYVQELFSNENFRCYTTTDIIGAQVGGAVKNVLAITAGIAAGMEFGVNAHAALITRGLAEIKKLGLKLGANSETFIGLS
CLGDLLLTCSDNQSRNRRFGLYLGQGMTIQQALKEVNNVVEGYFTAKAVYNFAKKHNVEMPLVFATYRILYEAADPRDIV
KELMTRQLKNEN

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI33695088, Length=335, Percent_Identity=27.7611940298507, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI24307999, Length=347, Percent_Identity=27.0893371757925, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI1790037, Length=334, Percent_Identity=43.4131736526946, Blast_Score=272, Evalue=2e-74,
Organism=Caenorhabditis elegans, GI32564399, Length=344, Percent_Identity=27.0348837209302, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32564403, Length=354, Percent_Identity=26.5536723163842, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI193210136, Length=354, Percent_Identity=26.5536723163842, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17507425, Length=283, Percent_Identity=25.4416961130742, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI193210134, Length=232, Percent_Identity=28.8793103448276, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6324513, Length=355, Percent_Identity=30.1408450704225, Blast_Score=103, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6320181, Length=341, Percent_Identity=27.5659824046921, Blast_Score=83, Evalue=7e-17,
Organism=Drosophila melanogaster, GI22026922, Length=338, Percent_Identity=25.4437869822485, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI17136200, Length=338, Percent_Identity=27.2189349112426, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17136204, Length=338, Percent_Identity=27.2189349112426, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17136202, Length=338, Percent_Identity=27.2189349112426, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 36678; Mature: 36678

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNILVLGAGAWGTALALQLAYRGHNVRINSWKAEHNEQMLKDNNNHKYLPSIEKFPSR
CCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHH
LKAIQDWQANIIEFDSILVATPSSGFKNTILELKECILPQQNIISATKGFCHDSYALLSE
HHHHHHHHCCCEEECEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
IAEDILPTTKFALLTGPSFAKELANQLPTAVVVASKDINYARYVQELFSNENFRCYTTTD
HHHHHCCCCHHEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEHH
IIGAQVGGAVKNVLAITAGIAAGMEFGVNAHAALITRGLAEIKKLGLKLGANSETFIGLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHH
CLGDLLLTCSDNQSRNRRFGLYLGQGMTIQQALKEVNNVVEGYFTAKAVYNFAKKHNVEM
HHHHHHEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLVFATYRILYEAADPRDIVKELMTRQLKNEN
CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQKNILVLGAGAWGTALALQLAYRGHNVRINSWKAEHNEQMLKDNNNHKYLPSIEKFPSR
CCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHH
LKAIQDWQANIIEFDSILVATPSSGFKNTILELKECILPQQNIISATKGFCHDSYALLSE
HHHHHHHHCCCEEECEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH
IAEDILPTTKFALLTGPSFAKELANQLPTAVVVASKDINYARYVQELFSNENFRCYTTTD
HHHHHCCCCHHEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEHH
IIGAQVGGAVKNVLAITAGIAAGMEFGVNAHAALITRGLAEIKKLGLKLGANSETFIGLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHH
CLGDLLLTCSDNQSRNRRFGLYLGQGMTIQQALKEVNNVVEGYFTAKAVYNFAKKHNVEM
HHHHHHEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLVFATYRILYEAADPRDIVKELMTRQLKNEN
CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA