| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255748
Identifier: 89255748
GI number: 89255748
Start: 304210
End: 304455
Strand: Reverse
Name: 89255748
Synonym: FTL_0318
Alternate gene names: NA
Gene position: 304455-304210 (Counterclockwise)
Preceding gene: 89255749
Following gene: 89255747
Centisome position: 16.06
GC content: 35.37
Gene sequence:
>246_bases ATGACTTTAAATAATAAATTAACAACAATGCTTTTGACTCTTTCTACAGTTTTAATTTCTTCTTGTGGCACGACAAGCCA AGAGGATATAAGCATTCTCGAACAGGCAAATAATACTTACTCTCAAGAAAAAAAAGTTACATCCCAGGGCACAGAGTTTA TCAGCAATGATACATACACCTTCAATAAACAAGAAAATGTGACAAGCTCAACGTCTGGTGGTGGAATAAGCTTTGGAATC TCCTAG
Upstream 100 bases:
>100_bases TTCATGCTGTTAATCTATTCTAAAAAAAAATTCACTTTTGTTTTACTAAGAAATTTTTATTAAGCATAATAATACTGTTA TAAGAACAAAGATTGATAAC
Downstream 100 bases:
>100_bases CATTTTAGTCATTGCTATTAGTGAAAAATTCGCCATTATTGGTAAATAAACTATCTATATACTCAAATTATAAATCATTA ATCTTTTTATATTTACAACC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MTLNNKLTTMLLTLSTVLISSCGTTSQEDISILEQANNTYSQEKKVTSQGTEFISNDTYTFNKQENVTSSTSGGGISFGI S
Sequences:
>Translated_81_residues MTLNNKLTTMLLTLSTVLISSCGTTSQEDISILEQANNTYSQEKKVTSQGTEFISNDTYTFNKQENVTSSTSGGGISFGI S >Mature_80_residues TLNNKLTTMLLTLSTVLISSCGTTSQEDISILEQANNTYSQEKKVTSQGTEFISNDTYTFNKQENVTSSTSGGGISFGIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8709; Mature: 8577
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNNKLTTMLLTLSTVLISSCGTTSQEDISILEQANNTYSQEKKVTSQGTEFISNDTYT CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHCCCCEE FNKQENVTSSTSGGGISFGIS ECCCCCCCCCCCCCCEEECCC >Mature Secondary Structure TLNNKLTTMLLTLSTVLISSCGTTSQEDISILEQANNTYSQEKKVTSQGTEFISNDTYT CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHCCCCEE FNKQENVTSSTSGGGISFGIS ECCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA