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The map label for this gene is secY [H]

Identifier: 89255690

GI number: 89255690

Start: 243238

End: 244563

Strand: Direct

Name: secY [H]

Synonym: FTL_0256

Alternate gene names: 89255690

Gene position: 243238-244563 (Clockwise)

Preceding gene: 89255689

Following gene: 89255691

Centisome position: 12.83

GC content: 34.01

Gene sequence:

>1326_bases
ATGTCAAAGTATAATAGTGCTTCTGGTACAACAGGTGAATTAAAATCTAGACTGATTTTTGTAGTCATTGCTATCTTGGT
ATTTAGACTCGGAGTTTATATTCCTATACCAAATATAGATCCTACTAAGTTGGTAGAGATTATTTCAAATCAACACTCAT
CAACCGGTGGTTTGATGAGTATGTTTAATATGTTCTCTGGTGGCGCTCTTACTCAAATGAGTATCTTTGCATTGGGTGTG
ATGCCTTATATTTCGGCATCAATTATTTTTCAGATGCTTTCAGCTGTATATCCAAAATTTATAGAGCTAAAAAAAGAAGG
TGAGTCTGGTCAAAAGAAAATCACTCAATATACAAGATATTTAACTCTTGCTTTGGCTATAGTACAATCATTTGGTATTG
TTGCATTTGTATTACATCAAGATGGTTTAGTAACTACAAATAATATGGCGTTATTTTATTTGACGACTATTGTTTCTGTT
ACAACGGGTAGTATGTTTTTGATGTGGCTAGGTGAGCAAATCACTGAAAGAGGTGTTGGAAATGGTATTTCACTACTAAT
CTTTTCAGGTATTGTTGCTAACTTGCCGTTTGAAATCTCAAACACATTATCACAAGCTAACCAGCATGTAATATCTTACT
TGTCTGTATGGGTGCTTTTAATTTTGCTACTATTAGTTATTGCATTTGTAGTATTTATGGAAAGTGCTCAGAGAAAAATT
ACAGTAAACTATGCTAAGAGACAGCAAGGTAGAAAAATGTTTGCTGCTCAGACTAGCCACTTGCCTCTAAAATTAAATAT
GGCTGGGGTAATTCCAGCAATTTTTGCATCATCAATATTGATGGTTCCTGGTGTATTACTTGGTTGGTTATCTAACTATA
ATTCACTTAGTTGGTTGGCAGATGTTGCAGAGATGCTGCAGCCAGGCAGTATAGTTTATACGGTAGTTTTTGCTGCGACA
ATTATCTTTTTCTGTTTCTTTTATACTTCTTTGGTATTAAATCCAAAAGAAACAGCAGATAATTTAAAGAAATCAGGCGC
TTATATTTCTGGTGTGAGACCTGGTGAGCAAACAGCTAAGTATATAGATGCAGTTATGACTAGATTAACTTTGGTTGGTT
CATTATATATCACAGCTATATGTTTATTACCAATTTTCGTAGTGAAGTTCTTTGCACAAGGATTATCATTTACATTTGGT
GGTACGTCTTTGCTGATCGTGGTAGTTGTGATGATGGACTTTATGGCTCAAGTTAGATCTCATATGATGTCAACACAATA
TGATTCTTTACTAAAAAAAGCAAATCTTAGTGGTAAGAGAAAATAG

Upstream 100 bases:

>100_bases
GAAATCCAAAAAGCTGTTAGCCTAAAAGGTATAGCTTGTACAAAAGGTGCAAAAGAAGCTATCGAAAAAGCTGGCGGTAA
AGTAGAGTAAGATTAAAGAT

Downstream 100 bases:

>100_bases
AGAAATATTTTTGGAGAAATATAATGAAAGTTAGAGCTTCAGTTAAAAAAATGTGTAGAAACTGTAAAGTTATCAAGCGC
AATAGAGTAGTTCGTGTGAT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MSKYNSASGTTGELKSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSTGGLMSMFNMFSGGALTQMSIFALGV
MPYISASIIFQMLSAVYPKFIELKKEGESGQKKITQYTRYLTLALAIVQSFGIVAFVLHQDGLVTTNNMALFYLTTIVSV
TTGSMFLMWLGEQITERGVGNGISLLIFSGIVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKI
TVNYAKRQQGRKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLSWLADVAEMLQPGSIVYTVVFAAT
IIFFCFFYTSLVLNPKETADNLKKSGAYISGVRPGEQTAKYIDAVMTRLTLVGSLYITAICLLPIFVVKFFAQGLSFTFG
GTSLLIVVVVMMDFMAQVRSHMMSTQYDSLLKKANLSGKRK

Sequences:

>Translated_441_residues
MSKYNSASGTTGELKSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSTGGLMSMFNMFSGGALTQMSIFALGV
MPYISASIIFQMLSAVYPKFIELKKEGESGQKKITQYTRYLTLALAIVQSFGIVAFVLHQDGLVTTNNMALFYLTTIVSV
TTGSMFLMWLGEQITERGVGNGISLLIFSGIVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKI
TVNYAKRQQGRKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLSWLADVAEMLQPGSIVYTVVFAAT
IIFFCFFYTSLVLNPKETADNLKKSGAYISGVRPGEQTAKYIDAVMTRLTLVGSLYITAICLLPIFVVKFFAQGLSFTFG
GTSLLIVVVVMMDFMAQVRSHMMSTQYDSLLKKANLSGKRK
>Mature_440_residues
SKYNSASGTTGELKSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSTGGLMSMFNMFSGGALTQMSIFALGVM
PYISASIIFQMLSAVYPKFIELKKEGESGQKKITQYTRYLTLALAIVQSFGIVAFVLHQDGLVTTNNMALFYLTTIVSVT
TGSMFLMWLGEQITERGVGNGISLLIFSGIVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKIT
VNYAKRQQGRKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLSWLADVAEMLQPGSIVYTVVFAATI
IFFCFFYTSLVLNPKETADNLKKSGAYISGVRPGEQTAKYIDAVMTRLTLVGSLYITAICLLPIFVVKFFAQGLSFTFGG
TSLLIVVVVMMDFMAQVRSHMMSTQYDSLLKKANLSGKRK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=438, Percent_Identity=59.3607305936073, Blast_Score=490, Evalue=1e-140,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48465; Mature: 48334

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKYNSASGTTGELKSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSTGGLMS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCCCCHHHHH
MFNMFSGGALTQMSIFALGVMPYISASIIFQMLSAVYPKFIELKKEGESGQKKITQYTRY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LTLALAIVQSFGIVAFVLHQDGLVTTNNMALFYLTTIVSVTTGSMFLMWLGEQITERGVG
HHHHHHHHHHHHHHEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NGISLLIFSGIVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKI
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
TVNYAKRQQGRKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLSWLA
EHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
DVAEMLQPGSIVYTVVFAATIIFFCFFYTSLVLNPKETADNLKKSGAYISGVRPGEQTAK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCHHHHH
YIDAVMTRLTLVGSLYITAICLLPIFVVKFFAQGLSFTFGGTSLLIVVVVMMDFMAQVRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
HMMSTQYDSLLKKANLSGKRK
HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKYNSASGTTGELKSRLIFVVIAILVFRLGVYIPIPNIDPTKLVEIISNQHSSTGGLMS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCCCCHHHHH
MFNMFSGGALTQMSIFALGVMPYISASIIFQMLSAVYPKFIELKKEGESGQKKITQYTRY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LTLALAIVQSFGIVAFVLHQDGLVTTNNMALFYLTTIVSVTTGSMFLMWLGEQITERGVG
HHHHHHHHHHHHHHEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NGISLLIFSGIVANLPFEISNTLSQANQHVISYLSVWVLLILLLLVIAFVVFMESAQRKI
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
TVNYAKRQQGRKMFAAQTSHLPLKLNMAGVIPAIFASSILMVPGVLLGWLSNYNSLSWLA
EHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
DVAEMLQPGSIVYTVVFAATIIFFCFFYTSLVLNPKETADNLKKSGAYISGVRPGEQTAK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCHHHHH
YIDAVMTRLTLVGSLYITAICLLPIFVVKFFAQGLSFTFGGTSLLIVVVVMMDFMAQVRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
HMMSTQYDSLLKKANLSGKRK
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]