| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is gltX [H]
Identifier: 89255652
GI number: 89255652
Start: 218246
End: 219652
Strand: Direct
Name: gltX [H]
Synonym: FTL_0218
Alternate gene names: 89255652
Gene position: 218246-219652 (Clockwise)
Preceding gene: 89255651
Following gene: 89255653
Centisome position: 11.51
GC content: 35.18
Gene sequence:
>1407_bases ATGATTACAACAAGATTTGCACCAAGTCCAACAGGGTTTTTACATGTTGGTGGAGTGCGTACTGCATTATTTAGCTGGTT ATATGCCAAAAATAACAATGGTAAATTTATTCTAAGAATAGAAGATACTGATTTGGAGAGATCTACTCAAGAGGCGGTCG ATGCTATTTTAGATGGAATGAGTTGGTTGGGGCTAAAAAATGATGGTGAGATCTACTATCAAACAAAGCGCTTTGATAGA TATAAAGAAGTGATACAAGAACTTATTGCGGATGGTAAAGCTTACTACTGTAGCTGTTCTAAAGAAAGACTAGAAGAGTT AAGAGAGTATCAGCAAGCAAATAATCTTAAAACTGGCTATGATGGTAAATGTCGTGATGCAAACTATATTCCACAACAAG GTGAGAGTTATGTAGTACGTTTTAAGAATCCTCAAGATGGAGTGGTCAGTTGGGATGATGCTGTCAAAGGTCGAATCTCA ATTTCAAATCATGAGCTTGATGATATGATTATCCAAAGAGCAGATGGTTCACCAACATATAATTTCTGTGTTGTTGTTGA TGATATTGATATGGCTATTACACATATTATTCGAGGCGATGATCATGTTAATAATACCCCTAAACAAATCAATATATACA AAGCTCTAAATGCTAATGTGCCGGTATTTGCCCATGTACCAATGATTCTTGGTCCAGATGGGGCAAAGTTGTCTAAGCGT CATGGTGCTGTTAATGTTATGCAGTACCGTGAAGATGGCTATTTACCTCAGGCGATACTTAATTATCTTGTTAGGCTTGG TTGGTCGCATGGTGATCAAGAGATTTTTTCTATCGAAGAAATGATAAAAGCTTTTAATTTAGAGCACATTAACGCATCAC CATCACGTTTTGATTTTGAAAAACTTAAGTGGCTGAACAAACATTATATCAAAGAGTCTAAGTTTGATGATATTCAAACA GAAGTTGAGTATCACTTTGCTAAAATTGGTTTAGATATTAGTAATGGTCCAGATTTAAAAGAGCTTGTAGCTGTGATGGC AGAAAAAGTTGATACATTAGTTGAACTAGCAGAAAAATCTAGTTATTTTTATAGTGATGATATCAGTTATGATGAAAATG CTGTAAAAAAACATATCAAAGCTTCAACGGGTGAGATATTTGTTAAGTTATTAGAAAACTTTGAAGCTTTGGATGCTCAG CAATGGCAAGATCCTGATGTTTTATATAATATAGTTAGTACAACAGCAGAGCAGTGCCAAGTTGGTATGGGTAAAGTTGG TATGCCATTGCGTGTGGCTATTACTAGTTCTGGCCAATCACCAGATATTGGTATTACTCTAAAACTTCTTGGTAAAAATA AAGTAGTTGCTAGACTTACTAAAGCACTTGAAGAGTTATGCAAGTAA
Upstream 100 bases:
>100_bases ATTAGATCTATTAACACTTATTAATCGTTTGCTTTAATCCTTGAAAGAAACTCGTTTCTAGTTTAATCTTTAAGCAATTT TATATTCAAGGTGTTTATAT
Downstream 100 bases:
>100_bases TGAAAATTAGAAAATTAAGCCTAATTATGTCGGTTTTGTTGTTTGCTACTGCAACTTACGCGAATAACCATTTTGGTAAT AACTTAGCTGGCTGCAGTTT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MITTRFAPSPTGFLHVGGVRTALFSWLYAKNNNGKFILRIEDTDLERSTQEAVDAILDGMSWLGLKNDGEIYYQTKRFDR YKEVIQELIADGKAYYCSCSKERLEELREYQQANNLKTGYDGKCRDANYIPQQGESYVVRFKNPQDGVVSWDDAVKGRIS ISNHELDDMIIQRADGSPTYNFCVVVDDIDMAITHIIRGDDHVNNTPKQINIYKALNANVPVFAHVPMILGPDGAKLSKR HGAVNVMQYREDGYLPQAILNYLVRLGWSHGDQEIFSIEEMIKAFNLEHINASPSRFDFEKLKWLNKHYIKESKFDDIQT EVEYHFAKIGLDISNGPDLKELVAVMAEKVDTLVELAEKSSYFYSDDISYDENAVKKHIKASTGEIFVKLLENFEALDAQ QWQDPDVLYNIVSTTAEQCQVGMGKVGMPLRVAITSSGQSPDIGITLKLLGKNKVVARLTKALEELCK
Sequences:
>Translated_468_residues MITTRFAPSPTGFLHVGGVRTALFSWLYAKNNNGKFILRIEDTDLERSTQEAVDAILDGMSWLGLKNDGEIYYQTKRFDR YKEVIQELIADGKAYYCSCSKERLEELREYQQANNLKTGYDGKCRDANYIPQQGESYVVRFKNPQDGVVSWDDAVKGRIS ISNHELDDMIIQRADGSPTYNFCVVVDDIDMAITHIIRGDDHVNNTPKQINIYKALNANVPVFAHVPMILGPDGAKLSKR HGAVNVMQYREDGYLPQAILNYLVRLGWSHGDQEIFSIEEMIKAFNLEHINASPSRFDFEKLKWLNKHYIKESKFDDIQT EVEYHFAKIGLDISNGPDLKELVAVMAEKVDTLVELAEKSSYFYSDDISYDENAVKKHIKASTGEIFVKLLENFEALDAQ QWQDPDVLYNIVSTTAEQCQVGMGKVGMPLRVAITSSGQSPDIGITLKLLGKNKVVARLTKALEELCK >Mature_468_residues MITTRFAPSPTGFLHVGGVRTALFSWLYAKNNNGKFILRIEDTDLERSTQEAVDAILDGMSWLGLKNDGEIYYQTKRFDR YKEVIQELIADGKAYYCSCSKERLEELREYQQANNLKTGYDGKCRDANYIPQQGESYVVRFKNPQDGVVSWDDAVKGRIS ISNHELDDMIIQRADGSPTYNFCVVVDDIDMAITHIIRGDDHVNNTPKQINIYKALNANVPVFAHVPMILGPDGAKLSKR HGAVNVMQYREDGYLPQAILNYLVRLGWSHGDQEIFSIEEMIKAFNLEHINASPSRFDFEKLKWLNKHYIKESKFDDIQT EVEYHFAKIGLDISNGPDLKELVAVMAEKVDTLVELAEKSSYFYSDDISYDENAVKKHIKASTGEIFVKLLENFEALDAQ QWQDPDVLYNIVSTTAEQCQVGMGKVGMPLRVAITSSGQSPDIGITLKLLGKNKVVARLTKALEELCK
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=326, Percent_Identity=35.8895705521472, Blast_Score=215, Evalue=8e-56, Organism=Homo sapiens, GI4826960, Length=293, Percent_Identity=27.3037542662116, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI62241042, Length=228, Percent_Identity=26.7543859649123, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1788743, Length=463, Percent_Identity=56.3714902807775, Blast_Score=550, Evalue=1e-158, Organism=Escherichia coli, GI226510925, Length=282, Percent_Identity=34.7517730496454, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1786895, Length=107, Percent_Identity=31.7757009345794, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71993394, Length=487, Percent_Identity=31.4168377823409, Blast_Score=207, Evalue=8e-54, Organism=Saccharomyces cerevisiae, GI6324540, Length=501, Percent_Identity=30.3393213572854, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6321192, Length=212, Percent_Identity=30.188679245283, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6324742, Length=209, Percent_Identity=28.7081339712919, Blast_Score=86, Evalue=9e-18, Organism=Drosophila melanogaster, GI24665321, Length=493, Percent_Identity=31.8458417849899, Blast_Score=239, Evalue=3e-63,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 53008; Mature: 53008
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITTRFAPSPTGFLHVGGVRTALFSWLYAKNNNGKFILRIEDTDLERSTQEAVDAILDGM CCCCCCCCCCCCEEEECHHHHHHHHHHHEECCCCEEEEEEECCCCCHHHHHHHHHHHCCH SWLGLKNDGEIYYQTKRFDRYKEVIQELIADGKAYYCSCSKERLEELREYQQANNLKTGY HHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCC DGKCRDANYIPQQGESYVVRFKNPQDGVVSWDDAVKGRISISNHELDDMIIQRADGSPTY CCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCEEEECCCCHHHHHHCCCCCCCCE NFCVVVDDIDMAITHIIRGDDHVNNTPKQINIYKALNANVPVFAHVPMILGPDGAKLSKR EEEEEEECHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEECCEEECCCCCHHHHH HGAVNVMQYREDGYLPQAILNYLVRLGWSHGDQEIFSIEEMIKAFNLEHINASPSRFDFE CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH KLKWLNKHYIKESKFDDIQTEVEYHFAKIGLDISNGPDLKELVAVMAEKVDTLVELAEKS HHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC SYFYSDDISYDENAVKKHIKASTGEIFVKLLENFEALDAQQWQDPDVLYNIVSTTAEQCQ CCEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHH VGMGKVGMPLRVAITSSGQSPDIGITLKLLGKNKVVARLTKALEELCK CCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure MITTRFAPSPTGFLHVGGVRTALFSWLYAKNNNGKFILRIEDTDLERSTQEAVDAILDGM CCCCCCCCCCCCEEEECHHHHHHHHHHHEECCCCEEEEEEECCCCCHHHHHHHHHHHCCH SWLGLKNDGEIYYQTKRFDRYKEVIQELIADGKAYYCSCSKERLEELREYQQANNLKTGY HHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCC DGKCRDANYIPQQGESYVVRFKNPQDGVVSWDDAVKGRISISNHELDDMIIQRADGSPTY CCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCEEEECCCCHHHHHHCCCCCCCCE NFCVVVDDIDMAITHIIRGDDHVNNTPKQINIYKALNANVPVFAHVPMILGPDGAKLSKR EEEEEEECHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEECCEEECCCCCHHHHH HGAVNVMQYREDGYLPQAILNYLVRLGWSHGDQEIFSIEEMIKAFNLEHINASPSRFDFE CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH KLKWLNKHYIKESKFDDIQTEVEYHFAKIGLDISNGPDLKELVAVMAEKVDTLVELAEKS HHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC SYFYSDDISYDENAVKKHIKASTGEIFVKLLENFEALDAQQWQDPDVLYNIVSTTAEQCQ CCEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHH VGMGKVGMPLRVAITSSGQSPDIGITLKLLGKNKVVARLTKALEELCK CCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA