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The map label for this gene is cyoD [H]

Identifier: 89255628

GI number: 89255628

Start: 196037

End: 196369

Strand: Direct

Name: cyoD [H]

Synonym: FTL_0194

Alternate gene names: 89255628

Gene position: 196037-196369 (Clockwise)

Preceding gene: 89255627

Following gene: 89255629

Centisome position: 10.34

GC content: 35.44

Gene sequence:

>333_bases
ATGGCTAAAGAACACTTATACGATCATGATACAGGCGCTGCATACGGTACACATAAGAGCTATATACAAGGTTTTGTGCT
ATCTGTAGTTATTACTACTATAGCTTTTGTTTTAGTTGGATTTAAGCTTTTATCTCCTGTTGCTTTATGTGTGACTGTGG
CAATATTAGCAGTAGTACAGCTTTTTGTACAGTTAGTGTTTTTCTTGCATCTAAGCACGGATTCAAAAGCACGTTGGAAC
TTGGTAAGTGCAATTTTTGCAATTGTTGTAGTTGTAATTGTAGTTGCTGGTACTATGTGGATCATGTTTGACTTATATGA
CATGATGATGTAA

Upstream 100 bases:

>100_bases
GCTAAGACTAAACTTACTTATCTAGGTTTGTTCTGGCACTTCTTAGATATCGTATGGATATTTGTATTCTCAATAGTTTA
CTTATTAGGAGCAGTGTAAT

Downstream 100 bases:

>100_bases
TTCTCTTTTTTAAAAAATATTTTTCTTACTATGTATTTCAAAAGATATCTTCAATTAGCTAAGCCAGGTATTATTTTTGG
TAATCTTATTACTCTTACAG

Product: cytochrome O ubiquinol oxidase subunit IV

Products: NA

Alternate protein names: Ubiquinol oxidase chain D [H]

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSPVALCVTVAILAVVQLFVQLVFFLHLSTDSKARWN
LVSAIFAIVVVVIVVAGTMWIMFDLYDMMM

Sequences:

>Translated_110_residues
MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSPVALCVTVAILAVVQLFVQLVFFLHLSTDSKARWN
LVSAIFAIVVVVIVVAGTMWIMFDLYDMMM
>Mature_109_residues
AKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSPVALCVTVAILAVVQLFVQLVFFLHLSTDSKARWNL
VSAIFAIVVVVIVVAGTMWIMFDLYDMMM

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

Organism=Escherichia coli, GI1786632, Length=108, Percent_Identity=41.6666666666667, Blast_Score=91, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: 1.10.3.-

Molecular weight: Translated: 12186; Mature: 12055

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSPVALCVTVAILAVVQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVQLVFFLHLSTDSKARWNLVSAIFAIVVVVIVVAGTMWIMFDLYDMMM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AKEHLYDHDTGAAYGTHKSYIQGFVLSVVITTIAFVLVGFKLLSPVALCVTVAILAVVQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVQLVFFLHLSTDSKARWNLVSAIFAIVVVVIVVAGTMWIMFDLYDMMM
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]