| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255603
Identifier: 89255603
GI number: 89255603
Start: 173151
End: 173714
Strand: Reverse
Name: 89255603
Synonym: FTL_0169
Alternate gene names: NA
Gene position: 173714-173151 (Counterclockwise)
Preceding gene: 89255605
Following gene: 89255602
Centisome position: 9.16
GC content: 34.57
Gene sequence:
>564_bases ATGTTACAGCGTGGATTATATACCTTAAAGGAGATGTTTAAACATCGTAAAAAACTCTACGGATTATCACAAGGATACCG TATCGATAGTATTATAAACCTATCAGCTAAATTGCTAAGGCAACAAGGAATTAAATATTTAGCATTGGACTTTGATGGCG TTCTAGCAAGTCATGGTAAGTCCGAAATGCATCCGGAGGTTATGCTTTGGTTTAAGGATTTTGTTACTGAATTTCCCGCG GACAGAATATTTATCCTCTCAAATAAGCCTACAGAAGCTAGACTTAAGTATTTTAATGCTAATTTTCCTAAAATTAGGTT TATTGCTGGGGTCGCAAAAAAACCATATCCAGATGGACTTAATAAAATCATCCAACTAGTAGGTTGCCAAGCAAAGGAGT TAGCACTTGTTGATGATAGATTGCTTACGGGCTGTCTAGCATGTTTAATTGCTGGTTGCTACCCAATACTTATCACTAAT CCTTATATAGATACAGATAACTATACTAAAGAGGAAAGATTCTTTAAATTTTTGCGCTATAGTGAACAAAAAATCTTTCT ATAA
Upstream 100 bases:
>100_bases AATTTTTAAAAATCTTATTAGCATAAGGAAAATACTCCGTCATGTTAAATAATTATTTTGTTGCTATACTATAAACACAA ATTTTTAAAAAGAATACTCT
Downstream 100 bases:
>100_bases ATTTTAATCTCTAGTATTTTATTTGATTATTACTTAACATTATATTAGTAGCTTTAAATTTAAATTTATTTATGAAAAAA AAATATTCTAGTACTAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MLQRGLYTLKEMFKHRKKLYGLSQGYRIDSIINLSAKLLRQQGIKYLALDFDGVLASHGKSEMHPEVMLWFKDFVTEFPA DRIFILSNKPTEARLKYFNANFPKIRFIAGVAKKPYPDGLNKIIQLVGCQAKELALVDDRLLTGCLACLIAGCYPILITN PYIDTDNYTKEERFFKFLRYSEQKIFL
Sequences:
>Translated_187_residues MLQRGLYTLKEMFKHRKKLYGLSQGYRIDSIINLSAKLLRQQGIKYLALDFDGVLASHGKSEMHPEVMLWFKDFVTEFPA DRIFILSNKPTEARLKYFNANFPKIRFIAGVAKKPYPDGLNKIIQLVGCQAKELALVDDRLLTGCLACLIAGCYPILITN PYIDTDNYTKEERFFKFLRYSEQKIFL >Mature_187_residues MLQRGLYTLKEMFKHRKKLYGLSQGYRIDSIINLSAKLLRQQGIKYLALDFDGVLASHGKSEMHPEVMLWFKDFVTEFPA DRIFILSNKPTEARLKYFNANFPKIRFIAGVAKKPYPDGLNKIIQLVGCQAKELALVDDRLLTGCLACLIAGCYPILITN PYIDTDNYTKEERFFKFLRYSEQKIFL
Specific function: Unknown
COG id: COG2179
COG function: function code R; Predicted hydrolase of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21672; Mature: 21672
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQRGLYTLKEMFKHRKKLYGLSQGYRIDSIINLSAKLLRQQGIKYLALDFDGVLASHGK CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCC SEMHPEVMLWFKDFVTEFPADRIFILSNKPTEARLKYFNANFPKIRFIAGVAKKPYPDGL CCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHH NKIIQLVGCQAKELALVDDRLLTGCLACLIAGCYPILITNPYIDTDNYTKEERFFKFLRY HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEECCCCCCHHHHHHHHHHH SEQKIFL CCCCCCC >Mature Secondary Structure MLQRGLYTLKEMFKHRKKLYGLSQGYRIDSIINLSAKLLRQQGIKYLALDFDGVLASHGK CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCC SEMHPEVMLWFKDFVTEFPADRIFILSNKPTEARLKYFNANFPKIRFIAGVAKKPYPDGL CCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHH NKIIQLVGCQAKELALVDDRLLTGCLACLIAGCYPILITNPYIDTDNYTKEERFFKFLRY HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEECCCCCCHHHHHHHHHHH SEQKIFL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA