| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is yejH [H]
Identifier: 89255601
GI number: 89255601
Start: 169574
End: 172315
Strand: Reverse
Name: yejH [H]
Synonym: FTL_0167
Alternate gene names: 89255601
Gene position: 172315-169574 (Counterclockwise)
Preceding gene: 89255602
Following gene: 89255600
Centisome position: 9.09
GC content: 31.29
Gene sequence:
>2742_bases ATGATTCAAGATTCTAAACAATTTCTGACTAATTCTAGAAAATCAAAAATATTAGATGAAATTATTAATCAGTTTGAGAA TTGTGAAGAGTTTATCATAAGTGTTGCCTTTATTACTTTTAGTGGAGTTGTATGTATCTTAGAGGTATTACGTCAACTAA GAGCTAAAGGGATAAAGGGTAAAATTCTTACAGGCTGTTATTTAAATTTTACCGAACCAAAAGCGCTTAAGAAACTCCTT GAGTTTGATAATATTGAGTTAAAAATCCTTAATGATGAAAACTTTCATGCTAAGGGATTCTTTTTTCGTAATAAAGATAG TTGGCAGATAATTCTAGGTAGCTCAAATCTAACTCAATCGGCTCTTACAATTAATAATGAGTGGAATTTGCTTATTAAGA CAAGTTTGGCTGATGTTACAACACAGCAAATTCTTGCAGAGTTTGATTATCTTTTTGATAGGGCGAAATATCCTAGCGAT ATCTTAGATGAGTATATTCAAATATATCAGCGTGCTAGTAAGTTAGCTAATAAAAGTATTCAACGTATAAGTCATAAAAT ACAGCCGAATAAAATTCAATGTGAAGCACTTGAAAGTTTAAGGCAGTTAAGAGATAGTGGCAAAAACAAGGCTTTAATAA TAAGTGCTACTGGTACGGGCAAGACTTTTCTAAGTGCCTTTGATATTGCAAGTATAAAACCAAAAAGATGTTTATTTGTC GTACATCGTACAAATATTGCTATAAAAGCACAAGAGACTTTTGCTAAAGTTATTAGCGATAAAACCTTAGGTCTATATAC AAGTGGTAATAAAACTTCAGCAGAGTATTTATTTGCTACAGTACAGACACTTAAAAACTCAAAAGTTTTAGCTAATTTTA AAAGCCAAGAATTTGAATACATAATCATCGACGAAGTTCATCATGCAGAAGCTGAAAGTTACAAAAAGGTTTTAGCACAC TTTACGCCAAAATTTTTGCTTGGAATGACAGCCACTCCAGAGCGTAGTGATGCTGCCGATATATTCAAACTATTTGATTA CAATATAGCTTATGAAATTAGACTCCATCAAGCCCTAGAGCAAGATTTGTTATGTCCATTTCATTATTTTGCTGTTGAAG ATTTGTATCTTGAGTCCGAAGAGATTTTAGCCAAAAATTTTGCCAAACTTGTTAGTGATGTGCGTGTTGAGCATATCATC GAAAAGATCAATTTTTATGGTTATAGTGGTCAATCTAGAGCGGCACTAATGTTTGTCAGTAATGTAGATGAGGCAAAAGA GCTTGCTACTAAACTTAGTAACAAAGGTATAAAGGCTAAAGCTTTATCAAGTCAAGATTCTGAGCAAATACGCCAAACAA CTATAGCACAGCTTGAGAGCGGTGAACTTGAGATTATTGTGACAGTTGATATCTTTAATGAAGGGGTTGATATCCCATGT ATCAATCAGATTATCCTTTTAAGACCTACCCAAAGTGCAATAGTTTACATCCAGCAGCTAGGAAGAGGTTTACGTAAATA TAAAGATAAGAAATTTGTGGTTATCCTTGATTTTATCGCAAACTATACAAATAACTTTCTGATTGCTGTAGCTTTAAGTG GCGATAATAGTTATGATAAGGACGAGCTTAAAAAGTTTGTCGTATCACCAAATAATTACCTAGCTGGTAAAAGTACCATC ACTTTTAGTAGTATTGCCAAAGAGATTATTTATAAGAATATTCAAAAAACAAATTTCTCACAGCTAAAAAATATCAAAAG AGACTACACTCAATTAAAAAAAGAGCTTGGTAGAATCCCAAGTTTAGTAGATTTTCAGCACTATAACTTTATTTCTCCAG AAGTTATCTTATCTACCAAAGATACTTACTATGATGTTCTAAAGGCTTTTAAAGAGGATATTATTAACTTAGATATACGT CAGTACAACATCTTAAAGTTTCTTTCAAAAGAATTTACTCCAGCGAAAAGACTTTATGAAATATTGATCTTAGAAGAGCT TTTTAAATCTAACTCTATAAGTATATCCGAGCTTGAAACCTCATTAAAAGCTAGTTTAGTTGACTTTGAAAAGACTAGTT TTACTAATGCGTTATTACATCTATCTTTGCAGATATTTACTATTAATGCAGGTAGACAAGATTATGAGCCGTTAATATCA GTAAATGCTCAAGAGGTTAGTTTGTTGGTTGCTGACTTAATAAATAAGAATAGTTTTTTGTATAAACAAATTATCGACTT AATCGCTTACAATAAGCTGATTTATGCTAGAAAATACTCTCAAAATAAATCTCATGGATTAGCGATGTATGCAAAATATA CTAAAAAAGAAATTGCTCATTTGCTTAATCAAGATTATACAAATGGGGGCGTAAACCTTGCCGGATATAGAGCATTTGGT AGCAAAGCACTGTTATTTATGACATTTGATGAGTATAAAAAATTTGGATTATATGATAATAAATTCATCTCACAACAGGC TTTCTCATACTATTCTAGAGCTGCAAAAACACTTGATGATCCTCTAGAAAAAGCACTTGTTGAAAATAGCTATCAAAGTT ATGTTTTTGCTAGAATAAATAAGCATGATAGTTATTTTTTTCTAGGATTGGTATCTAAATGTTTAGAGGCTAAAGAGATA AATGCTAGCAAAAAACTTGTTAGCTATATTTTTGAGCTAGAAAAGCCAATTCCTAAAGAAATCTGGCAGTATTTTACAAC AATTTATAAAAATAAAATTTGA
Upstream 100 bases:
>100_bases TGTGGTGTAGCGAAACAAACCAATCAAGTCTACTGCTGGGGCAAAAGTAAAAAGGGTCAAACTAACCTCGACTCTGCAGT ACCTGTTGAAGATATAAGTA
Downstream 100 bases:
>100_bases TGTTTAATTAAATGCTTTTTTATTTTTGTTTGTTATAATGGAAACTAGAAGGAAAAGTAAGTAGGGAGATTCCTAATGGC GTACAAAAAGGTTTTATTAG
Product: DNA/RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 913; Mature: 913
Protein sequence:
>913_residues MIQDSKQFLTNSRKSKILDEIINQFENCEEFIISVAFITFSGVVCILEVLRQLRAKGIKGKILTGCYLNFTEPKALKKLL EFDNIELKILNDENFHAKGFFFRNKDSWQIILGSSNLTQSALTINNEWNLLIKTSLADVTTQQILAEFDYLFDRAKYPSD ILDEYIQIYQRASKLANKSIQRISHKIQPNKIQCEALESLRQLRDSGKNKALIISATGTGKTFLSAFDIASIKPKRCLFV VHRTNIAIKAQETFAKVISDKTLGLYTSGNKTSAEYLFATVQTLKNSKVLANFKSQEFEYIIIDEVHHAEAESYKKVLAH FTPKFLLGMTATPERSDAADIFKLFDYNIAYEIRLHQALEQDLLCPFHYFAVEDLYLESEEILAKNFAKLVSDVRVEHII EKINFYGYSGQSRAALMFVSNVDEAKELATKLSNKGIKAKALSSQDSEQIRQTTIAQLESGELEIIVTVDIFNEGVDIPC INQIILLRPTQSAIVYIQQLGRGLRKYKDKKFVVILDFIANYTNNFLIAVALSGDNSYDKDELKKFVVSPNNYLAGKSTI TFSSIAKEIIYKNIQKTNFSQLKNIKRDYTQLKKELGRIPSLVDFQHYNFISPEVILSTKDTYYDVLKAFKEDIINLDIR QYNILKFLSKEFTPAKRLYEILILEELFKSNSISISELETSLKASLVDFEKTSFTNALLHLSLQIFTINAGRQDYEPLIS VNAQEVSLLVADLINKNSFLYKQIIDLIAYNKLIYARKYSQNKSHGLAMYAKYTKKEIAHLLNQDYTNGGVNLAGYRAFG SKALLFMTFDEYKKFGLYDNKFISQQAFSYYSRAAKTLDDPLEKALVENSYQSYVFARINKHDSYFFLGLVSKCLEAKEI NASKKLVSYIFELEKPIPKEIWQYFTTIYKNKI
Sequences:
>Translated_913_residues MIQDSKQFLTNSRKSKILDEIINQFENCEEFIISVAFITFSGVVCILEVLRQLRAKGIKGKILTGCYLNFTEPKALKKLL EFDNIELKILNDENFHAKGFFFRNKDSWQIILGSSNLTQSALTINNEWNLLIKTSLADVTTQQILAEFDYLFDRAKYPSD ILDEYIQIYQRASKLANKSIQRISHKIQPNKIQCEALESLRQLRDSGKNKALIISATGTGKTFLSAFDIASIKPKRCLFV VHRTNIAIKAQETFAKVISDKTLGLYTSGNKTSAEYLFATVQTLKNSKVLANFKSQEFEYIIIDEVHHAEAESYKKVLAH FTPKFLLGMTATPERSDAADIFKLFDYNIAYEIRLHQALEQDLLCPFHYFAVEDLYLESEEILAKNFAKLVSDVRVEHII EKINFYGYSGQSRAALMFVSNVDEAKELATKLSNKGIKAKALSSQDSEQIRQTTIAQLESGELEIIVTVDIFNEGVDIPC INQIILLRPTQSAIVYIQQLGRGLRKYKDKKFVVILDFIANYTNNFLIAVALSGDNSYDKDELKKFVVSPNNYLAGKSTI TFSSIAKEIIYKNIQKTNFSQLKNIKRDYTQLKKELGRIPSLVDFQHYNFISPEVILSTKDTYYDVLKAFKEDIINLDIR QYNILKFLSKEFTPAKRLYEILILEELFKSNSISISELETSLKASLVDFEKTSFTNALLHLSLQIFTINAGRQDYEPLIS VNAQEVSLLVADLINKNSFLYKQIIDLIAYNKLIYARKYSQNKSHGLAMYAKYTKKEIAHLLNQDYTNGGVNLAGYRAFG SKALLFMTFDEYKKFGLYDNKFISQQAFSYYSRAAKTLDDPLEKALVENSYQSYVFARINKHDSYFFLGLVSKCLEAKEI NASKKLVSYIFELEKPIPKEIWQYFTTIYKNKI >Mature_913_residues MIQDSKQFLTNSRKSKILDEIINQFENCEEFIISVAFITFSGVVCILEVLRQLRAKGIKGKILTGCYLNFTEPKALKKLL EFDNIELKILNDENFHAKGFFFRNKDSWQIILGSSNLTQSALTINNEWNLLIKTSLADVTTQQILAEFDYLFDRAKYPSD ILDEYIQIYQRASKLANKSIQRISHKIQPNKIQCEALESLRQLRDSGKNKALIISATGTGKTFLSAFDIASIKPKRCLFV VHRTNIAIKAQETFAKVISDKTLGLYTSGNKTSAEYLFATVQTLKNSKVLANFKSQEFEYIIIDEVHHAEAESYKKVLAH FTPKFLLGMTATPERSDAADIFKLFDYNIAYEIRLHQALEQDLLCPFHYFAVEDLYLESEEILAKNFAKLVSDVRVEHII EKINFYGYSGQSRAALMFVSNVDEAKELATKLSNKGIKAKALSSQDSEQIRQTTIAQLESGELEIIVTVDIFNEGVDIPC INQIILLRPTQSAIVYIQQLGRGLRKYKDKKFVVILDFIANYTNNFLIAVALSGDNSYDKDELKKFVVSPNNYLAGKSTI TFSSIAKEIIYKNIQKTNFSQLKNIKRDYTQLKKELGRIPSLVDFQHYNFISPEVILSTKDTYYDVLKAFKEDIINLDIR QYNILKFLSKEFTPAKRLYEILILEELFKSNSISISELETSLKASLVDFEKTSFTNALLHLSLQIFTINAGRQDYEPLIS VNAQEVSLLVADLINKNSFLYKQIIDLIAYNKLIYARKYSQNKSHGLAMYAKYTKKEIAHLLNQDYTNGGVNLAGYRAFG SKALLFMTFDEYKKFGLYDNKFISQQAFSYYSRAAKTLDDPLEKALVENSYQSYVFARINKHDSYFFLGLVSKCLEAKEI NASKKLVSYIFELEKPIPKEIWQYFTTIYKNKI
Specific function: Unknown
COG id: COG1061
COG function: function code KL; DNA or RNA helicases of superfamily II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788511, Length=394, Percent_Identity=25.1269035532995, Blast_Score=89, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6320539, Length=371, Percent_Identity=28.0323450134771, Blast_Score=125, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR006935 [H]
Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]
EC number: NA
Molecular weight: Translated: 104702; Mature: 104702
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQDSKQFLTNSRKSKILDEIINQFENCEEFIISVAFITFSGVVCILEVLRQLRAKGIKG CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KILTGCYLNFTEPKALKKLLEFDNIELKILNDENFHAKGFFFRNKDSWQIILGSSNLTQS EEEEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCEECEEEEECCCCEEEEECCCCCCCC ALTINNEWNLLIKTSLADVTTQQILAEFDYLFDRAKYPSDILDEYIQIYQRASKLANKSI EEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QRISHKIQPNKIQCEALESLRQLRDSGKNKALIISATGTGKTFLSAFDIASIKPKRCLFV HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEE VHRTNIAIKAQETFAKVISDKTLGLYTSGNKTSAEYLFATVQTLKNSKVLANFKSQEFEY EEECCEEEEEHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCE IIIDEVHHAEAESYKKVLAHFTPKFLLGMTATPERSDAADIFKLFDYNIAYEIRLHQALE EEEECCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHH QDLLCPFHYFAVEDLYLESEEILAKNFAKLVSDVRVEHIIEKINFYGYSGQSRAALMFVS HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC NVDEAKELATKLSNKGIKAKALSSQDSEQIRQTTIAQLESGELEIIVTVDIFNEGVDIPC CCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCC INQIILLRPTQSAIVYIQQLGRGLRKYKDKKFVVILDFIANYTNNFLIAVALSGDNSYDK CCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCEEEEEEECCCCCCCH DELKKFVVSPNNYLAGKSTITFSSIAKEIIYKNIQKTNFSQLKNIKRDYTQLKKELGRIP HHHHHHHCCCCCEECCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC SLVDFQHYNFISPEVILSTKDTYYDVLKAFKEDIINLDIRQYNILKFLSKEFTPAKRLYE CEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH ILILEELFKSNSISISELETSLKASLVDFEKTSFTNALLHLSLQIFTINAGRQDYEPLIS HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCHHHC VNAQEVSLLVADLINKNSFLYKQIIDLIAYNKLIYARKYSQNKSHGLAMYAKYTKKEIAH CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHH LLNQDYTNGGVNLAGYRAFGSKALLFMTFDEYKKFGLYDNKFISQQAFSYYSRAAKTLDD HHCCCCCCCCCEEEEEEECCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH PLEKALVENSYQSYVFARINKHDSYFFLGLVSKCLEAKEINASKKLVSYIFELEKPIPKE HHHHHHHHCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH IWQYFTTIYKNKI HHHHHHHHHHCCC >Mature Secondary Structure MIQDSKQFLTNSRKSKILDEIINQFENCEEFIISVAFITFSGVVCILEVLRQLRAKGIKG CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KILTGCYLNFTEPKALKKLLEFDNIELKILNDENFHAKGFFFRNKDSWQIILGSSNLTQS EEEEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCEECEEEEECCCCEEEEECCCCCCCC ALTINNEWNLLIKTSLADVTTQQILAEFDYLFDRAKYPSDILDEYIQIYQRASKLANKSI EEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QRISHKIQPNKIQCEALESLRQLRDSGKNKALIISATGTGKTFLSAFDIASIKPKRCLFV HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEE VHRTNIAIKAQETFAKVISDKTLGLYTSGNKTSAEYLFATVQTLKNSKVLANFKSQEFEY EEECCEEEEEHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCE IIIDEVHHAEAESYKKVLAHFTPKFLLGMTATPERSDAADIFKLFDYNIAYEIRLHQALE EEEECCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHH QDLLCPFHYFAVEDLYLESEEILAKNFAKLVSDVRVEHIIEKINFYGYSGQSRAALMFVS HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC NVDEAKELATKLSNKGIKAKALSSQDSEQIRQTTIAQLESGELEIIVTVDIFNEGVDIPC CCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCC INQIILLRPTQSAIVYIQQLGRGLRKYKDKKFVVILDFIANYTNNFLIAVALSGDNSYDK CCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCEEEEEEECCCCCCCH DELKKFVVSPNNYLAGKSTITFSSIAKEIIYKNIQKTNFSQLKNIKRDYTQLKKELGRIP HHHHHHHCCCCCEECCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC SLVDFQHYNFISPEVILSTKDTYYDVLKAFKEDIINLDIRQYNILKFLSKEFTPAKRLYE CEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH ILILEELFKSNSISISELETSLKASLVDFEKTSFTNALLHLSLQIFTINAGRQDYEPLIS HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCHHHC VNAQEVSLLVADLINKNSFLYKQIIDLIAYNKLIYARKYSQNKSHGLAMYAKYTKKEIAH CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHH LLNQDYTNGGVNLAGYRAFGSKALLFMTFDEYKKFGLYDNKFISQQAFSYYSRAAKTLDD HHCCCCCCCCCEEEEEEECCCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH PLEKALVENSYQSYVFARINKHDSYFFLGLVSKCLEAKEINASKKLVSYIFELEKPIPKE HHHHHHHHCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH IWQYFTTIYKNKI HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]