| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89255497
Identifier: 89255497
GI number: 89255497
Start: 51483
End: 52169
Strand: Reverse
Name: 89255497
Synonym: FTL_0050
Alternate gene names: NA
Gene position: 52169-51483 (Counterclockwise)
Preceding gene: 89255498
Following gene: 89255496
Centisome position: 2.75
GC content: 30.57
Gene sequence:
>687_bases ATGGGTAGTTTGTATTTAATTCTATTGATAACTATAGCTTTGGCAAAATTTGAAGAAAATGACAGCGTAAGTATCAATAA ACAACTTAATAATCACCCTAGCTCGGCTAAAACTAAACTTTTAAATATTAGTGTAATCTTAATTGCCCTAGCAATAATGA TCTATGTATATATCGAATATATTGTCTCATACTGGTTCTCACCATATTTACAAGAGGCAAAACATATAAAGGTTACAGAT GTAGGTCTTATCATCGACTTATTTTGGGGAATTATTGCTCTTTCACGCTTAGTTGTTGGCTTGTTTGTGCTGACAAAAAT AAAGCCTGCAGTTTATATTATGATTAGCTCATTTATCACTTTAATTGGCTTTATAATATTTTTAGTTGCTAATACTCTAA CTGGGTTTATTATAGGAGGTATTGTCTTAGGATTTGGCTGTGCTGCAATGTTTCCAACACTTTTAGGATATGGGATTAAC AATGCTAACTACTCTAGTCCAAAAGTTTCTTCCTACTTGATAATGTCTGGTTCTATAGGCGCTTCAATATGTCTATTTAT TTCAGGTTTTTTAGGTGAGCATATAGACAAGCAAGTGCCTATTATAGTTGGTCCAATATTTTGTTTAATTATAATTGTTT TAGTTTTTATAGCTTATCTAAAAAACAATAAACTCTTATCTAAATAG
Upstream 100 bases:
>100_bases AAATGTTTTAAACTTTTTCTTTGGTGCGGGCTCTGCTTTTGTACCTTTTATTGGCGGTCATATAGTACAGCAATTCTCTT GGCAAGCTGTATTTATTGGT
Downstream 100 bases:
>100_bases CTCTTAGGGTATTTTTTATACTCGGATTAATTATATTATCGATATTATTGAAAAAACTCACATAGCTAAAATTATTTTTA CAGTGTAATAGTATACTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MGSLYLILLITIALAKFEENDSVSINKQLNNHPSSAKTKLLNISVILIALAIMIYVYIEYIVSYWFSPYLQEAKHIKVTD VGLIIDLFWGIIALSRLVVGLFVLTKIKPAVYIMISSFITLIGFIIFLVANTLTGFIIGGIVLGFGCAAMFPTLLGYGIN NANYSSPKVSSYLIMSGSIGASICLFISGFLGEHIDKQVPIIVGPIFCLIIIVLVFIAYLKNNKLLSK
Sequences:
>Translated_228_residues MGSLYLILLITIALAKFEENDSVSINKQLNNHPSSAKTKLLNISVILIALAIMIYVYIEYIVSYWFSPYLQEAKHIKVTD VGLIIDLFWGIIALSRLVVGLFVLTKIKPAVYIMISSFITLIGFIIFLVANTLTGFIIGGIVLGFGCAAMFPTLLGYGIN NANYSSPKVSSYLIMSGSIGASICLFISGFLGEHIDKQVPIIVGPIFCLIIIVLVFIAYLKNNKLLSK >Mature_227_residues GSLYLILLITIALAKFEENDSVSINKQLNNHPSSAKTKLLNISVILIALAIMIYVYIEYIVSYWFSPYLQEAKHIKVTDV GLIIDLFWGIIALSRLVVGLFVLTKIKPAVYIMISSFITLIGFIIFLVANTLTGFIIGGIVLGFGCAAMFPTLLGYGINN ANYSSPKVSSYLIMSGSIGASICLFISGFLGEHIDKQVPIIVGPIFCLIIIVLVFIAYLKNNKLLSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24993; Mature: 24861
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLYLILLITIALAKFEENDSVSINKQLNNHPSSAKTKLLNISVILIALAIMIYVYIEY CCHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IVSYWFSPYLQEAKHIKVTDVGLIIDLFWGIIALSRLVVGLFVLTKIKPAVYIMISSFIT HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGFIIFLVANTLTGFIIGGIVLGFGCAAMFPTLLGYGINNANYSSPKVSSYLIMSGSIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCCH ASICLFISGFLGEHIDKQVPIIVGPIFCLIIIVLVFIAYLKNNKLLSK HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GSLYLILLITIALAKFEENDSVSINKQLNNHPSSAKTKLLNISVILIALAIMIYVYIEY CHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IVSYWFSPYLQEAKHIKVTDVGLIIDLFWGIIALSRLVVGLFVLTKIKPAVYIMISSFIT HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGFIIFLVANTLTGFIIGGIVLGFGCAAMFPTLLGYGINNANYSSPKVSSYLIMSGSIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEECCCCH ASICLFISGFLGEHIDKQVPIIVGPIFCLIIIVLVFIAYLKNNKLLSK HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA