Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89255467

Identifier: 89255467

GI number: 89255467

Start: 17176

End: 17472

Strand: Reverse

Name: 89255467

Synonym: FTL_0019

Alternate gene names: NA

Gene position: 17472-17176 (Counterclockwise)

Preceding gene: 89255468

Following gene: 89255456

Centisome position: 0.92

GC content: 28.28

Gene sequence:

>297_bases
ATGAATATAGTGCAAATATGTCCTGCAATTGTTCCAGTCAATAATTATGGTAGTACAGAAAGAGTTATCTATTGGCTATC
TGGTGCTCTGGCTGAATTAGGACATCAAATTTTATTAATAGCTCCTAAAGGAAGTTATCATCAAAATACTAATGTTAAAA
TTATTGAGTGTGAAGATTTTAGTAATCTAGCCAAGGTAATACCAAAAAATGTAGATATAGTTCATATTCATGATATAAAT
TATATAAACCAAGTAAAATCATTTAGGTGGTTATTGACAATACATGTAATGATATAG

Upstream 100 bases:

>100_bases
AAATTATAATAATATAAATCACTCTAATAATTCTTTTATAAATACTAAAATGTATAATAAATCTATACTTATTTTTATAT
TGTTTATTTGAGAGTGAATC

Downstream 100 bases:

>100_bases
TTAATCCGAAAGATATTTGTAGAAAAAGATATTTGTAGAAATGTTATAATGTCTAATAAAAATGCCATCATATAGCCAAG
ATTTTAGAGACATCGTAATT

Product: sugar transferase, fragment

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MNIVQICPAIVPVNNYGSTERVIYWLSGALAELGHQILLIAPKGSYHQNTNVKIIECEDFSNLAKVIPKNVDIVHIHDIN
YINQVKSFRWLLTIHVMI

Sequences:

>Translated_98_residues
MNIVQICPAIVPVNNYGSTERVIYWLSGALAELGHQILLIAPKGSYHQNTNVKIIECEDFSNLAKVIPKNVDIVHIHDIN
YINQVKSFRWLLTIHVMI
>Mature_98_residues
MNIVQICPAIVPVNNYGSTERVIYWLSGALAELGHQILLIAPKGSYHQNTNVKIIECEDFSNLAKVIPKNVDIVHIHDIN
YINQVKSFRWLLTIHVMI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11151; Mature: 11151

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVQICPAIVPVNNYGSTERVIYWLSGALAELGHQILLIAPKGSYHQNTNVKIIECEDF
CCHHHHCCEEEECCCCCCCCEEEEEEHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCC
SNLAKVIPKNVDIVHIHDINYINQVKSFRWLLTIHVMI
HHHHHHCCCCCCEEEEECCCHHHHHHHEEEEEEEEEEC
>Mature Secondary Structure
MNIVQICPAIVPVNNYGSTERVIYWLSGALAELGHQILLIAPKGSYHQNTNVKIIECEDF
CCHHHHCCEEEECCCCCCCCEEEEEEHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCC
SNLAKVIPKNVDIVHIHDINYINQVKSFRWLLTIHVMI
HHHHHHCCCCCCEEEEECCCHHHHHHHEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA