| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is recX [H]
Identifier: 89255462
GI number: 89255462
Start: 10855
End: 11307
Strand: Direct
Name: recX [H]
Synonym: FTL_0013
Alternate gene names: 89255462
Gene position: 10855-11307 (Clockwise)
Preceding gene: 89255461
Following gene: 89255463
Centisome position: 0.57
GC content: 27.81
Gene sequence:
>453_bases ATGAGCTTATCTAAAGAAAAAAACTATCTTCTTTATTTACTTGCAAAGCAAGATTATTCACGCAAACAACTTTTTGATAA ACTTATTTCACGCGATAATATCTCTCTAAATGATATTAATAGTCTTTTAGATGAATTTGAACAAAATAAATGGCTATCTG ATGAAAGGTTTGCATATGTATTCATAAATAGTGAAATTGCTAAGTTTAGAGGTAAGAAACGTATTATAAACACAGCAGTT TATCAAAAAGGTTTATCATTAGAATTAGTTGAAAGTTGTCTTGAAAATCAAGAGTTAGATTGGTTTGAGCTTTGTAGGCA ATGCTTGAATAAAAAGTATAGAGATATCAATAAATTACAAGCAGATTTCAAGCTTAAGCAAAAAGCGATGAATTACTTAA TATATAATGGCTTTAGCTTTGATGAGATAAATTTTGCGCTTAACCAAAGTTAG
Upstream 100 bases:
>100_bases GAACTCTTGCTACCAAATAAATATTCTAATAAAGATAGTAATGATAGTCCTAAAGAAGGTTCTAAAATCAAAACTAAAGT AAATCCAGCAGTTACTCAAG
Downstream 100 bases:
>100_bases TTAAATTTGGCTAGTTTAAAAGAGCATAGTGAGTTAGGCTTGTGGCTTTTGAGGATAATTTCTTAAGTTATTTTTTATAA AAAAATAGCAAAAATTTATT
Product: regulatory protein recX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSLSKEKNYLLYLLAKQDYSRKQLFDKLISRDNISLNDINSLLDEFEQNKWLSDERFAYVFINSEIAKFRGKKRIINTAV YQKGLSLELVESCLENQELDWFELCRQCLNKKYRDINKLQADFKLKQKAMNYLIYNGFSFDEINFALNQS
Sequences:
>Translated_150_residues MSLSKEKNYLLYLLAKQDYSRKQLFDKLISRDNISLNDINSLLDEFEQNKWLSDERFAYVFINSEIAKFRGKKRIINTAV YQKGLSLELVESCLENQELDWFELCRQCLNKKYRDINKLQADFKLKQKAMNYLIYNGFSFDEINFALNQS >Mature_149_residues SLSKEKNYLLYLLAKQDYSRKQLFDKLISRDNISLNDINSLLDEFEQNKWLSDERFAYVFINSEIAKFRGKKRIINTAVY QKGLSLELVESCLENQELDWFELCRQCLNKKYRDINKLQADFKLKQKAMNYLIYNGFSFDEINFALNQS
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 17939; Mature: 17808
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSKEKNYLLYLLAKQDYSRKQLFDKLISRDNISLNDINSLLDEFEQNKWLSDERFAYV CCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE FINSEIAKFRGKKRIINTAVYQKGLSLELVESCLENQELDWFELCRQCLNKKYRDINKLQ EECCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ADFKLKQKAMNYLIYNGFSFDEINFALNQS HHHHHHHHHHHHHHCCCCCCCHHCEEECCC >Mature Secondary Structure SLSKEKNYLLYLLAKQDYSRKQLFDKLISRDNISLNDINSLLDEFEQNKWLSDERFAYV CCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE FINSEIAKFRGKKRIINTAVYQKGLSLELVESCLENQELDWFELCRQCLNKKYRDINKLQ EECCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ADFKLKQKAMNYLIYNGFSFDEINFALNQS HHHHHHHHHHHHHHCCCCCCCHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA