| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is secE [C]
Identifier: 161353779
GI number: 161353779
Start: 1684439
End: 1684909
Strand: Reverse
Name: secE [C]
Synonym: FTL_1750
Alternate gene names: 161353779
Gene position: 1684909-1684439 (Counterclockwise)
Preceding gene: 89257020
Following gene: 89257018
Centisome position: 88.87
GC content: 34.18
Gene sequence:
>471_bases TTGCCTGTGTATGAATTATTTTTTTTGAAGGATTGTTTTGTGAAAAGGAATCAAGGTTTTAATAATAACAAAGTATGGAT AAGTGGTGCAACCAAGACCACTGAAGTTAAAAAAATCTCAAAATCTAACAATTTGATGTTATGGTTGGCTGTTGTGGCTA TCATTGTTTTGGGTGTTGCTGTTACTATGTATTCAGATATTTTGGGTGATAGCTATAGTACTTACAATACGTCTTTGGCA GTAGTTGTTGTGCTACTTGCTGTAGTTGTGGCTAGATTTACAAATCAAGGACGTCGTTTTTGGGCATTTTTCCAGGCTTC TAGGCTTGAGTTGGCAAAAGTTGTGTGGCCTACACGTAAAGAGACAATGACTATTTCTCTGATGGTGATAGTTGTGGTAA TAATTTTTGCGCTGATAATATCTTTATTTGGTGTTATATTTGAGAATTTTATTCAGTATTTTCTGGATTAA
Upstream 100 bases:
>100_bases GCCACATAATTAAGGCAGTGTTGTAATTTTTGCAGCACTGCCTTTTTTATTTCTTGATATTATACTTTCTGTATGTTATT TTATAGGCTACGTTTATGAT
Downstream 100 bases:
>100_bases TAAAGGGATATAAGTATGCTTTGGTATGTTGTGCAGGTGCACTCAGGTTACGAAAAAAGAGTGAAAGCTCAGCTTGAAGA AAATATCGAGATAGCTGGAT
Product: preprotein translocase subunit SecE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MPVYELFFLKDCFVKRNQGFNNNKVWISGATKTTEVKKISKSNNLMLWLAVVAIIVLGVAVTMYSDILGDSYSTYNTSLA VVVVLLAVVVARFTNQGRRFWAFFQASRLELAKVVWPTRKETMTISLMVIVVVIIFALIISLFGVIFENFIQYFLD
Sequences:
>Translated_156_residues MPVYELFFLKDCFVKRNQGFNNNKVWISGATKTTEVKKISKSNNLMLWLAVVAIIVLGVAVTMYSDILGDSYSTYNTSLA VVVVLLAVVVARFTNQGRRFWAFFQASRLELAKVVWPTRKETMTISLMVIVVVIIFALIISLFGVIFENFIQYFLD >Mature_155_residues PVYELFFLKDCFVKRNQGFNNNKVWISGATKTTEVKKISKSNNLMLWLAVVAIIVLGVAVTMYSDILGDSYSTYNTSLAV VVVLLAVVVARFTNQGRRFWAFFQASRLELAKVVWPTRKETMTISLMVIVVVIIFALIISLFGVIFENFIQYFLD
Specific function: Essential For Protein Export. [C]
COG id: COG0690
COG function: function code U; Preprotein translocase subunit SecE
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17749; Mature: 17618
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS01067 SECE_SEC61G
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVYELFFLKDCFVKRNQGFNNNKVWISGATKTTEVKKISKSNNLMLWLAVVAIIVLGVA CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHH VTMYSDILGDSYSTYNTSLAVVVVLLAVVVARFTNQGRRFWAFFQASRLELAKVVWPTRK HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC ETMTISLMVIVVVIIFALIISLFGVIFENFIQYFLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PVYELFFLKDCFVKRNQGFNNNKVWISGATKTTEVKKISKSNNLMLWLAVVAIIVLGVA CHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHH VTMYSDILGDSYSTYNTSLAVVVVLLAVVVARFTNQGRRFWAFFQASRLELAKVVWPTRK HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC ETMTISLMVIVVVIIFALIISLFGVIFENFIQYFLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA