| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056644
Identifier: 89056644
GI number: 89056644
Start: 4265152
End: 4265751
Strand: Direct
Name: 89056644
Synonym: Jann_4153
Alternate gene names: NA
Gene position: 4265152-4265751 (Clockwise)
Preceding gene: 89056642
Following gene: 89056645
Centisome position: 98.78
GC content: 62.67
Gene sequence:
>600_bases ATGCAGCCAGAGATTCGGAAGATCGTCACCTATGATGAGGAGGTCTTGATCGAAGGCTTCCGCAAAGCCGATGCACCCTG GCGCATGTTCGCAATTGCCTGCGTGGTGCGGAACCCCTGGGCGGGTCGTTTCGTGGAGGATCTTAAGCCCGAGATCATGG CCTATGGCCCCGTTTTGGGGGAACTGATGACCGAGCGCATGATCACGCTGGCAGGCTCTGGCGATGCGATTGAAGCCTAC GGCAAGGCCGCAATCGTCGGCGTGGACGGAGAGGTGGAGCATGCCTCCGGCCTGATCCACACGTTGCGGTTCGGGAACTT TTTCCGGGAGGCGGTCGGCGCGAATTCGTACCTCGCCTTCACCAACACCCGCGGCCCGGCCAATGCACCGATCATGGTGC CGCTGATGGACAAGAATGACGCCGGGCGCAGGTCCCATTACCTGACGATCCAGTTTGCGATCCCCGATGCCCCCCGCGCG GACGAGATCGTCGTTTTGCTGGGGGCGGCGACGTCCGGAAGGCCCCATCACCGCATCGGCGACCGTTACCAAGACCTCAA GGACCTGGGCCATGACCTGGACAACCCGGCCGCGGTCTGA
Upstream 100 bases:
>100_bases CAATCTTGCCATTAACGACGCTAATGGCAATGGCGCGGAATTCCTCGTTTGTCAAAATCCCGGATCACCCCGACGGTGCA CCCGGAGCGGGAGAGCCCAG
Downstream 100 bases:
>100_bases ATTCGGCCCGCTTCAGGCGGTCCGTGCAGGCGCGGGACCATGCGTCGTGTTATTGCACGGCGTGGGCCTGCGGGCCGAGG CCTGGGGCGCACAGATCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MQPEIRKIVTYDEEVLIEGFRKADAPWRMFAIACVVRNPWAGRFVEDLKPEIMAYGPVLGELMTERMITLAGSGDAIEAY GKAAIVGVDGEVEHASGLIHTLRFGNFFREAVGANSYLAFTNTRGPANAPIMVPLMDKNDAGRRSHYLTIQFAIPDAPRA DEIVVLLGAATSGRPHHRIGDRYQDLKDLGHDLDNPAAV
Sequences:
>Translated_199_residues MQPEIRKIVTYDEEVLIEGFRKADAPWRMFAIACVVRNPWAGRFVEDLKPEIMAYGPVLGELMTERMITLAGSGDAIEAY GKAAIVGVDGEVEHASGLIHTLRFGNFFREAVGANSYLAFTNTRGPANAPIMVPLMDKNDAGRRSHYLTIQFAIPDAPRA DEIVVLLGAATSGRPHHRIGDRYQDLKDLGHDLDNPAAV >Mature_199_residues MQPEIRKIVTYDEEVLIEGFRKADAPWRMFAIACVVRNPWAGRFVEDLKPEIMAYGPVLGELMTERMITLAGSGDAIEAY GKAAIVGVDGEVEHASGLIHTLRFGNFFREAVGANSYLAFTNTRGPANAPIMVPLMDKNDAGRRSHYLTIQFAIPDAPRA DEIVVLLGAATSGRPHHRIGDRYQDLKDLGHDLDNPAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21859; Mature: 21859
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPEIRKIVTYDEEVLIEGFRKADAPWRMFAIACVVRNPWAGRFVEDLKPEIMAYGPVLG CCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHEEHHHHHH ELMTERMITLAGSGDAIEAYGKAAIVGVDGEVEHASGLIHTLRFGNFFREAVGANSYLAF HHHHHHHEEEECCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE TNTRGPANAPIMVPLMDKNDAGRRSHYLTIQFAIPDAPRADEIVVLLGAATSGRPHHRIG ECCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHH DRYQDLKDLGHDLDNPAAV HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQPEIRKIVTYDEEVLIEGFRKADAPWRMFAIACVVRNPWAGRFVEDLKPEIMAYGPVLG CCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHEEHHHHHH ELMTERMITLAGSGDAIEAYGKAAIVGVDGEVEHASGLIHTLRFGNFFREAVGANSYLAF HHHHHHHEEEECCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE TNTRGPANAPIMVPLMDKNDAGRRSHYLTIQFAIPDAPRADEIVVLLGAATSGRPHHRIG ECCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHH DRYQDLKDLGHDLDNPAAV HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA