| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056567
Identifier: 89056567
GI number: 89056567
Start: 4183328
End: 4183756
Strand: Direct
Name: 89056567
Synonym: Jann_4076
Alternate gene names: NA
Gene position: 4183328-4183756 (Clockwise)
Preceding gene: 89056566
Following gene: 161898393
Centisome position: 96.88
GC content: 65.73
Gene sequence:
>429_bases ATGCGCTTTCTTCCAACTCTGGCCCTCTGCATGGGCCTTGCAGGCCTTGGCGGGATCACCCCCCCGGCCGAGGCCCAGAC CACCGCAACCGCCATTGCCTCCGGCCAATTCCAGGACACAGGCCCGCGCTACCAGGGGTCCGGCTCAGCGGTGATCGCGC AAACATCTGACGGGCAGACGGTGCTGCAATTCGGTGACTTCTCTGTCACACCGGGCCCGGATCTGGAGGTTTGGCTGGTC GAGGCCGACGCGCCCACAAGCGCCGCGGCGGTGCTGGCCAGCAGCTATATCTCGCTGGGGCCGCTGCAATCCGCAACGGG AGGGCAAACGTATGGCATCCCGTCCGATATCGACGCCTCCGCCTATGGCAGCGTGGTGATCTGGTGCGAAGATTTCAGCG TGCTGTTCTCCGTCGCGCCGCTGCGCTGA
Upstream 100 bases:
>100_bases ACGACATGGATCACGGGCCAATCCCACAGATGTGAATGGCGTTGGACGGCGACCTGCGGCTAGCGTCCCTTTGACAGACC GCTATCCAAAGGGACACATC
Downstream 100 bases:
>100_bases CCACCTAGGGGCGGGGTTAGCCTCGCCCTACAGCCCGCCCATCTTGCAGACGATCTTCCATTCTGCGTCTGTGACGGGCT GTACCGAGAGACGCGCGCTC
Product: putative secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MRFLPTLALCMGLAGLGGITPPAEAQTTATAIASGQFQDTGPRYQGSGSAVIAQTSDGQTVLQFGDFSVTPGPDLEVWLV EADAPTSAAAVLASSYISLGPLQSATGGQTYGIPSDIDASAYGSVVIWCEDFSVLFSVAPLR
Sequences:
>Translated_142_residues MRFLPTLALCMGLAGLGGITPPAEAQTTATAIASGQFQDTGPRYQGSGSAVIAQTSDGQTVLQFGDFSVTPGPDLEVWLV EADAPTSAAAVLASSYISLGPLQSATGGQTYGIPSDIDASAYGSVVIWCEDFSVLFSVAPLR >Mature_142_residues MRFLPTLALCMGLAGLGGITPPAEAQTTATAIASGQFQDTGPRYQGSGSAVIAQTSDGQTVLQFGDFSVTPGPDLEVWLV EADAPTSAAAVLASSYISLGPLQSATGGQTYGIPSDIDASAYGSVVIWCEDFSVLFSVAPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14462; Mature: 14462
Theoretical pI: Translated: 3.58; Mature: 3.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLPTLALCMGLAGLGGITPPAEAQTTATAIASGQFQDTGPRYQGSGSAVIAQTSDGQT CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCEEEEECCCCCE VLQFGDFSVTPGPDLEVWLVEADAPTSAAAVLASSYISLGPLQSATGGQTYGIPSDIDAS EEEECCEECCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC AYGSVVIWCEDFSVLFSVAPLR CCCCEEEEECCCEEEEEECCCC >Mature Secondary Structure MRFLPTLALCMGLAGLGGITPPAEAQTTATAIASGQFQDTGPRYQGSGSAVIAQTSDGQT CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCEEEEECCCCCE VLQFGDFSVTPGPDLEVWLVEADAPTSAAAVLASSYISLGPLQSATGGQTYGIPSDIDAS EEEECCEECCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC AYGSVVIWCEDFSVLFSVAPLR CCCCEEEEECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA