Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056555

Identifier: 89056555

GI number: 89056555

Start: 4169061

End: 4169741

Strand: Direct

Name: 89056555

Synonym: Jann_4064

Alternate gene names: NA

Gene position: 4169061-4169741 (Clockwise)

Preceding gene: 89056554

Following gene: 89056556

Centisome position: 96.55

GC content: 65.49

Gene sequence:

>681_bases
ATGACCCTGCCCTGCCTGATCCTTGCGGCTGGGTTCGGCACGCGCATGGGGGCCCTGACGGCAGATCGCCCCAAGCCGCT
GATAGACGTCGCCAACCGCCTCCTGCTGGATCACGCGCTGGACGCCGCCCGGGGGACCGGGCCGATCACCGTGAACGCCC
ATTGCCACGCCGACCAGATCGCCGCGCATCTGGCCGGGACGTCGCTGCGTCTTCAGTACGAGTACCCCGATATCCTGGAT
TCCGGCGGTGCGGTGAAACGGGCCGCCCAAAGCCTGCCGACCGGGCCCATCGCCACGCTCAACGCCGATAATGTCTGGAC
CGGAGAGGCCCCCATCACGCAGCTTAGCGCCGCCTTTGATCCTGCGAGAATGGGGGCGCTCCTCCTCCTTGTGCCGCGCG
CGGACGCTGTCGGGCGCATCGGTGTTGGCGATTTCAGCATGGATGCAGAGGGGCGGCTGACCCTCGATAAATTGCCCGAA
AGCTACGTCTATACCGGCGCGCAGATCCTTGACCCCACGCCGTGCCTCAATGATCCGCGCGATGTGTTTACCCTGCGCGA
TATGTGGCACGCCTATGCCGCTGAAGGTCGCCTGTTTGGCCTGATCCATCGGGGTCGGTGGGCCGATGTGGGCAACCCGG
ACGGCATTGCCCTTGCCGAAAGGATGCTGCGAGATGTTTGA

Upstream 100 bases:

>100_bases
CACGCACCCGCACCTTAATTGCACGGGCCGCGTCAGACCTGCCACCCATGCTGGCCCCCGTCACCGAGCTACTCGATCGG
ACTGCCCATTGGACCGCCCC

Downstream 100 bases:

>100_bases
CACGTCCACCACCGCGCGCGTCTTCGCCACGCCTTTGGGTGTCGACTTTTGCGCCGCGCTCATCGACGGGCTTGATCGGG
CGCTGAGCGGCCAAGGCCCC

Product: nucleotidyl transferase

Products: NA

Alternate protein names: Nucleotidyltransferase Family Protein; Nucleotidyl Transferase Superfamily; Nucleotidyl Transferase Family Protein; Nucleotidyltransferase Protein; Mannose-1-Phosphate Guanylyltransferase; Mannose-1-Phosphate Guanyltransferase; Nucleotidyl Transferase Protein; Nucleotidyltransferase

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTLPCLILAAGFGTRMGALTADRPKPLIDVANRLLLDHALDAARGTGPITVNAHCHADQIAAHLAGTSLRLQYEYPDILD
SGGAVKRAAQSLPTGPIATLNADNVWTGEAPITQLSAAFDPARMGALLLLVPRADAVGRIGVGDFSMDAEGRLTLDKLPE
SYVYTGAQILDPTPCLNDPRDVFTLRDMWHAYAAEGRLFGLIHRGRWADVGNPDGIALAERMLRDV

Sequences:

>Translated_226_residues
MTLPCLILAAGFGTRMGALTADRPKPLIDVANRLLLDHALDAARGTGPITVNAHCHADQIAAHLAGTSLRLQYEYPDILD
SGGAVKRAAQSLPTGPIATLNADNVWTGEAPITQLSAAFDPARMGALLLLVPRADAVGRIGVGDFSMDAEGRLTLDKLPE
SYVYTGAQILDPTPCLNDPRDVFTLRDMWHAYAAEGRLFGLIHRGRWADVGNPDGIALAERMLRDV
>Mature_225_residues
TLPCLILAAGFGTRMGALTADRPKPLIDVANRLLLDHALDAARGTGPITVNAHCHADQIAAHLAGTSLRLQYEYPDILDS
GGAVKRAAQSLPTGPIATLNADNVWTGEAPITQLSAAFDPARMGALLLLVPRADAVGRIGVGDFSMDAEGRLTLDKLPES
YVYTGAQILDPTPCLNDPRDVFTLRDMWHAYAAEGRLFGLIHRGRWADVGNPDGIALAERMLRDV

Specific function: Unknown

COG id: COG1208

COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24158; Mature: 24027

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPCLILAAGFGTRMGALTADRPKPLIDVANRLLLDHALDAARGTGPITVNAHCHADQI
CCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHH
AAHLAGTSLRLQYEYPDILDSGGAVKRAAQSLPTGPIATLNADNVWTGEAPITQLSAAFD
HHHHCCCEEEEEECCCHHHCCCCHHHHHHHHCCCCCEEEECCCCEECCCCCHHHHHHHCC
PARMGALLLLVPRADAVGRIGVGDFSMDAEGRLTLDKLPESYVYTGAQILDPTPCLNDPR
HHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHCCCCCEECCCEEECCCCCCCCCH
DVFTLRDMWHAYAAEGRLFGLIHRGRWADVGNPDGIALAERMLRDV
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TLPCLILAAGFGTRMGALTADRPKPLIDVANRLLLDHALDAARGTGPITVNAHCHADQI
CCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHH
AAHLAGTSLRLQYEYPDILDSGGAVKRAAQSLPTGPIATLNADNVWTGEAPITQLSAAFD
HHHHCCCEEEEEECCCHHHCCCCHHHHHHHHCCCCCEEEECCCCEECCCCCHHHHHHHCC
PARMGALLLLVPRADAVGRIGVGDFSMDAEGRLTLDKLPESYVYTGAQILDPTPCLNDPR
HHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHCCCCCEECCCEEECCCCCCCCCH
DVFTLRDMWHAYAAEGRLFGLIHRGRWADVGNPDGIALAERMLRDV
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA