Click here to switch to the map view.

The map label for this gene is rpmJ

Identifier: 89056488

GI number: 89056488

Start: 4101762

End: 4101887

Strand: Direct

Name: rpmJ

Synonym: Jann_3997

Alternate gene names: 89056488

Gene position: 4101762-4101887 (Clockwise)

Preceding gene: 89056486

Following gene: 89056491

Centisome position: 94.99

GC content: 59.52

Gene sequence:

>126_bases
ATGAAGGTCAAGAACTCACTCCGCTCGCTCAAGAACCGCCATCGCGATTGCCGCGTTGTGCGCCGTAAGGGCCGCGTCTA
CGTCATCAACAAGACGCAGCGCCGGTTCAAAGCCCGTCAGGGCTAA

Upstream 100 bases:

>100_bases
ACAATAGGCCCCATGTGGGCCGCAAGAATTCACCGGGTGCATCCACCGCGCCCAGACCGCAACCAGGCGCAGCTGACGCG
CCGCGACGAAGGAGAGACCC

Downstream 100 bases:

>100_bases
GGTCCCCGGACCCGGTCATTGAGCGACCAGAAGACTTAGAAGCCGCCCTCACCGGGGCGGCTTTTTTCATGGCCAATTGA
TGCGCGAGCGGCAGAAAGTC

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MKVKNSLRSLKNRHRDCRVVRRKGRVYVINKTQRRFKARQG

Sequences:

>Translated_41_residues
MKVKNSLRSLKNRHRDCRVVRRKGRVYVINKTQRRFKARQG
>Mature_41_residues
MKVKNSLRSLKNRHRDCRVVRRKGRVYVINKTQRRFKARQG

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000473 [H]

Pfam domain/function: PF00444 Ribosomal_L36 [H]

EC number: NA

Molecular weight: Translated: 5040; Mature: 5040

Theoretical pI: Translated: 12.69; Mature: 12.69

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKNSLRSLKNRHRDCRVVRRKGRVYVINKTQRRFKARQG
CCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCC
>Mature Secondary Structure
MKVKNSLRSLKNRHRDCRVVRRKGRVYVINKTQRRFKARQG
CCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA