| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yfeW [C]
Identifier: 89056299
GI number: 89056299
Start: 3894397
End: 3895368
Strand: Direct
Name: yfeW [C]
Synonym: Jann_3808
Alternate gene names: 89056299
Gene position: 3894397-3895368 (Clockwise)
Preceding gene: 89056298
Following gene: 89056300
Centisome position: 90.19
GC content: 64.92
Gene sequence:
>972_bases ATGAGTTTCAACGCCGCATGGTCCCTCGTGACGAAGGCCGTCGACGCCAGGCGCATCCCCTGTGCCGTGCTGGGTCTGGT GGACGACACCGGGCGGCACGTTGCCTGGGCGGGATCTGCTCAAGTGGTTCCAGACACGGTGCCGGTGACACGCGACACCA TCTTCGACCTCGCCTCTCTCACCAAGCCGATTTTCACGACCGAACGTATCCTGGCCCACGCGGATGCAGGCCGGATTGAC CTCGACGCGCCGCTCACCAGCGCCATCCCCGACTTCCGCCAATATCACACGGATTGTTGGGAGCGCGCGGCCACCTTCCG CGATTGCCTCGGCCATCGCACGCATTTCCCCGCCGTTGCGCCCCTCTACACCTATGGCCATGACCCGGCGACATTGCGCG CGTTTGTTTTGCAACGGGAATGGGCGCGGGAGGAGACACCCGTCTACTCGGATATCAACTACATCCTTCTGGGCATCGCG TTGGAACGGCTCGAAGGCTGCGGCATCCGCGACATGGACCCCGGGCCCGGCTTCTCTTTCAACCCACCGTCAGACGCCTG TACCGCCACCGAGGCCTGTACCTGGCGCGGGCGCGTGATGCGTGGCGAGGTGCACGACGAGAATTGCTTCGCCCTGCAAG GGTCAGGCCATGCGGGGCTGTTTGGCACCATGGACGCCGTGCTGGACTTCGGACAGGCGATGCTTGCGCGCGGGTTGGGT CTGGCCGGGCAACGCCTGACTGATACGCGGACCCATGGCTGGGAAATTCGTTATCCCGGCTGGTCCGGTGGTCAGATGTG TACGCCCGGCACCATCGGCCACACCGGGTTCACGGGGACAGGCCTGTGGATCGACGCCGACACGGGTCGCATCTGGAGCC TGCTGACCAACCGCGTCCATCCCACGCGCCACGCGGACAGTGGCATCGCGGATCTTCGGGTGTTGGTGGGGGAGGCTCTT TATGGCACATGA
Upstream 100 bases:
>100_bases ACGAGGTCCCCTCGACCCTGCGCCCCTTGGGGTGGAAACCCGCGCCGGTGATTTGGCAGGACCACGGTCCGGGTCACCAC TTTGCGGCGGAGCCATCGCC
Downstream 100 bases:
>100_bases CATGCGATGGTGCGTCGGGTTGATGACCGGCACAGTCCTGGACGGCAACATCGACGTCGCCCTGTTGCAAACAGATGGCG AGCGCATCGGCGCATTCGGC
Product: beta-lactamase
Products: NA
Alternate protein names: Esterase; Beta-Lactamase Family Protein; Secreted Esterase; Esterase Beta-Lactamase Family; D-Alanyl-D-Alanine Carboxypeptidease; Beta Lactamase; Carboxylesterase; Beta-Lactamase Class C Protein
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSFNAAWSLVTKAVDARRIPCAVLGLVDDTGRHVAWAGSAQVVPDTVPVTRDTIFDLASLTKPIFTTERILAHADAGRID LDAPLTSAIPDFRQYHTDCWERAATFRDCLGHRTHFPAVAPLYTYGHDPATLRAFVLQREWAREETPVYSDINYILLGIA LERLEGCGIRDMDPGPGFSFNPPSDACTATEACTWRGRVMRGEVHDENCFALQGSGHAGLFGTMDAVLDFGQAMLARGLG LAGQRLTDTRTHGWEIRYPGWSGGQMCTPGTIGHTGFTGTGLWIDADTGRIWSLLTNRVHPTRHADSGIADLRVLVGEAL YGT
Sequences:
>Translated_323_residues MSFNAAWSLVTKAVDARRIPCAVLGLVDDTGRHVAWAGSAQVVPDTVPVTRDTIFDLASLTKPIFTTERILAHADAGRID LDAPLTSAIPDFRQYHTDCWERAATFRDCLGHRTHFPAVAPLYTYGHDPATLRAFVLQREWAREETPVYSDINYILLGIA LERLEGCGIRDMDPGPGFSFNPPSDACTATEACTWRGRVMRGEVHDENCFALQGSGHAGLFGTMDAVLDFGQAMLARGLG LAGQRLTDTRTHGWEIRYPGWSGGQMCTPGTIGHTGFTGTGLWIDADTGRIWSLLTNRVHPTRHADSGIADLRVLVGEAL YGT >Mature_322_residues SFNAAWSLVTKAVDARRIPCAVLGLVDDTGRHVAWAGSAQVVPDTVPVTRDTIFDLASLTKPIFTTERILAHADAGRIDL DAPLTSAIPDFRQYHTDCWERAATFRDCLGHRTHFPAVAPLYTYGHDPATLRAFVLQREWAREETPVYSDINYILLGIAL ERLEGCGIRDMDPGPGFSFNPPSDACTATEACTWRGRVMRGEVHDENCFALQGSGHAGLFGTMDAVLDFGQAMLARGLGL AGQRLTDTRTHGWEIRYPGWSGGQMCTPGTIGHTGFTGTGLWIDADTGRIWSLLTNRVHPTRHADSGIADLRVLVGEALY GT
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35240; Mature: 35109
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNAAWSLVTKAVDARRIPCAVLGLVDDTGRHVAWAGSAQVVPDTVPVTRDTIFDLASL CCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHH TKPIFTTERILAHADAGRIDLDAPLTSAIPDFRQYHTDCWERAATFRDCLGHRTHFPAVA HHHHHHHHHHHHHCCCCCEECCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PLYTYGHDPATLRAFVLQREWAREETPVYSDINYILLGIALERLEGCGIRDMDPGPGFSF CHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC NPPSDACTATEACTWRGRVMRGEVHDENCFALQGSGHAGLFGTMDAVLDFGQAMLARGLG CCCCCHHHHHHHHCCCCCEEECEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC LAGQRLTDTRTHGWEIRYPGWSGGQMCTPGTIGHTGFTGTGLWIDADTGRIWSLLTNRVH CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCC PTRHADSGIADLRVLVGEALYGT CCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SFNAAWSLVTKAVDARRIPCAVLGLVDDTGRHVAWAGSAQVVPDTVPVTRDTIFDLASL CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHH TKPIFTTERILAHADAGRIDLDAPLTSAIPDFRQYHTDCWERAATFRDCLGHRTHFPAVA HHHHHHHHHHHHHCCCCCEECCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PLYTYGHDPATLRAFVLQREWAREETPVYSDINYILLGIALERLEGCGIRDMDPGPGFSF CHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC NPPSDACTATEACTWRGRVMRGEVHDENCFALQGSGHAGLFGTMDAVLDFGQAMLARGLG CCCCCHHHHHHHHCCCCCEEECEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC LAGQRLTDTRTHGWEIRYPGWSGGQMCTPGTIGHTGFTGTGLWIDADTGRIWSLLTNRVH CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCC PTRHADSGIADLRVLVGEALYGT CCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA