| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056283
Identifier: 89056283
GI number: 89056283
Start: 3877448
End: 3878638
Strand: Direct
Name: 89056283
Synonym: Jann_3792
Alternate gene names: NA
Gene position: 3877448-3878638 (Clockwise)
Preceding gene: 89056282
Following gene: 89056290
Centisome position: 89.8
GC content: 62.72
Gene sequence:
>1191_bases ATGAAACACGCAGAAGACATCATCGGCAAAGCCCATACTGCCCCCTTCTACAAGGTCGCCAATCCGGGCGATATCGGCCT GGACCTGCCCGACATCCGCCATGGCGATGCCGTACGGTGCTGGGTCAACGCGCTGGCCGGGTTCCAGAAAGAGGCGCTGG TTGGCTCTGCCCGGTCCGACAACGTCTGGCGATTGGTCTCTGATGAAGGCGCATACCTGAACGGCCACGACGCCGCCCCC TGCCCGCTGTCGTTCCTCAGCACAGGCATGGTCGCCAGCTACATGAACGAGATCATGGCATTGGCCAAACAGCAGGGCGT GGAGCTGCGCAAGCTGCGGCTGATCCAGAACAACTACTACACGATGCAGGGGTCCATGCGGAAGCGGACGATGACCGGCG GCGCGCTGCCAGTCGAGCTGGAAGTCCAGTGTGAGTGTGATCTGGATGACGCTGCCTTGCAGGAGTTGGTGGCGAATGCC GTCCATGCCTCACCGCTGAATGGCCTGATGCGCGGCAAACTGCCGTCCCTGTTCACCCTGACCCGGAACGGCACGCAGAT AGAGACCGGGGACGCAATCGCGTTGAACGCCCCCGTTGTCGGCGACCCGTCGGGTGATCCACCTCTGGCCGCAAGCAGCG ATCTGTCCCTTATCGCCCGCGAAGGCATGTCACCCACCAAAACCGTCGCCAAGGGCACCGCGGGCTCTGCCACGTCCTTG ACGGATGAGCAGGACCGGACGCTGAACCCCGGGGTGATCTGTACCCTGCGCGAGGATGGCATCAAGGAGATCGAACAACA TCTGTATTCCCCCCACGGCTCCATCTTCCGCTACCTCAGCGAAGAGGCGGAGCCTGCGGGTGGCCAAGGCCGTGCGCCCG ACGCCGTCAGCTATATCTCTGCCGGGATCGCCTTTTGTTTCATGACGCAGTTCGGGCGTATGGCCTCGATGGAGAAGCTG GACCTGTCCCACTACTCCATTGTCCAAGACACGCATTTCTCGCTCGGCGGCGCGTCGGGTGGCACCGGCAAGGCGGGCAC GGCAGACCCGGTCGAGACGCATGTTCACCTGCGCACGTCAGAGGCCGACGACGTGGCGCGCGACATGCTGGACGTGTCAG AGCGGACATGTTTCCTGCATGCCTTCTGCCGGACAGACCTGAAAACCAGGCTGAAAATCACGCGGGTCTAA
Upstream 100 bases:
>100_bases GGCCGCCGTCCTGCTGATCCTCACCTTCCCGCAAATCGCATTGCTCCTGCCCAACACGATGTTCGGCTAGGCAGGCGCAC GTCCCGAAAGGAGCTGTCCC
Downstream 100 bases:
>100_bases GCGCAGCTATTCTGATGCTCCAATAGCGCGGGCGAGGATTGCGTCGGCATCCGCCGTCTCGCCCGCCCAGGCCACATATC CGTCGGGTCGGACCAGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MKHAEDIIGKAHTAPFYKVANPGDIGLDLPDIRHGDAVRCWVNALAGFQKEALVGSARSDNVWRLVSDEGAYLNGHDAAP CPLSFLSTGMVASYMNEIMALAKQQGVELRKLRLIQNNYYTMQGSMRKRTMTGGALPVELEVQCECDLDDAALQELVANA VHASPLNGLMRGKLPSLFTLTRNGTQIETGDAIALNAPVVGDPSGDPPLAASSDLSLIAREGMSPTKTVAKGTAGSATSL TDEQDRTLNPGVICTLREDGIKEIEQHLYSPHGSIFRYLSEEAEPAGGQGRAPDAVSYISAGIAFCFMTQFGRMASMEKL DLSHYSIVQDTHFSLGGASGGTGKAGTADPVETHVHLRTSEADDVARDMLDVSERTCFLHAFCRTDLKTRLKITRV
Sequences:
>Translated_396_residues MKHAEDIIGKAHTAPFYKVANPGDIGLDLPDIRHGDAVRCWVNALAGFQKEALVGSARSDNVWRLVSDEGAYLNGHDAAP CPLSFLSTGMVASYMNEIMALAKQQGVELRKLRLIQNNYYTMQGSMRKRTMTGGALPVELEVQCECDLDDAALQELVANA VHASPLNGLMRGKLPSLFTLTRNGTQIETGDAIALNAPVVGDPSGDPPLAASSDLSLIAREGMSPTKTVAKGTAGSATSL TDEQDRTLNPGVICTLREDGIKEIEQHLYSPHGSIFRYLSEEAEPAGGQGRAPDAVSYISAGIAFCFMTQFGRMASMEKL DLSHYSIVQDTHFSLGGASGGTGKAGTADPVETHVHLRTSEADDVARDMLDVSERTCFLHAFCRTDLKTRLKITRV >Mature_396_residues MKHAEDIIGKAHTAPFYKVANPGDIGLDLPDIRHGDAVRCWVNALAGFQKEALVGSARSDNVWRLVSDEGAYLNGHDAAP CPLSFLSTGMVASYMNEIMALAKQQGVELRKLRLIQNNYYTMQGSMRKRTMTGGALPVELEVQCECDLDDAALQELVANA VHASPLNGLMRGKLPSLFTLTRNGTQIETGDAIALNAPVVGDPSGDPPLAASSDLSLIAREGMSPTKTVAKGTAGSATSL TDEQDRTLNPGVICTLREDGIKEIEQHLYSPHGSIFRYLSEEAEPAGGQGRAPDAVSYISAGIAFCFMTQFGRMASMEKL DLSHYSIVQDTHFSLGGASGGTGKAGTADPVETHVHLRTSEADDVARDMLDVSERTCFLHAFCRTDLKTRLKITRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42539; Mature: 42539
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHAEDIIGKAHTAPFYKVANPGDIGLDLPDIRHGDAVRCWVNALAGFQKEALVGSARSD CCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCC NVWRLVSDEGAYLNGHDAAPCPLSFLSTGMVASYMNEIMALAKQQGVELRKLRLIQNNYY CEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEE TMQGSMRKRTMTGGALPVELEVQCECDLDDAALQELVANAVHASPLNGLMRGKLPSLFTL EEECCCHHHEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEE TRNGTQIETGDAIALNAPVVGDPSGDPPLAASSDLSLIAREGMSPTKTVAKGTAGSATSL ECCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCC TDEQDRTLNPGVICTLREDGIKEIEQHLYSPHGSIFRYLSEEAEPAGGQGRAPDAVSYIS CCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH AGIAFCFMTQFGRMASMEKLDLSHYSIVQDTHFSLGGASGGTGKAGTADPVETHVHLRTS HHHHHHHHHHHHHHHHHHHHCCCHHHHECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC EADDVARDMLDVSERTCFLHAFCRTDLKTRLKITRV CHHHHHHHHHHHHHHHHHHHHHHHHCHHHCEEEECC >Mature Secondary Structure MKHAEDIIGKAHTAPFYKVANPGDIGLDLPDIRHGDAVRCWVNALAGFQKEALVGSARSD CCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCC NVWRLVSDEGAYLNGHDAAPCPLSFLSTGMVASYMNEIMALAKQQGVELRKLRLIQNNYY CEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEE TMQGSMRKRTMTGGALPVELEVQCECDLDDAALQELVANAVHASPLNGLMRGKLPSLFTL EEECCCHHHEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEE TRNGTQIETGDAIALNAPVVGDPSGDPPLAASSDLSLIAREGMSPTKTVAKGTAGSATSL ECCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCC TDEQDRTLNPGVICTLREDGIKEIEQHLYSPHGSIFRYLSEEAEPAGGQGRAPDAVSYIS CCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH AGIAFCFMTQFGRMASMEKLDLSHYSIVQDTHFSLGGASGGTGKAGTADPVETHVHLRTS HHHHHHHHHHHHHHHHHHHHCCCHHHHECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC EADDVARDMLDVSERTCFLHAFCRTDLKTRLKITRV CHHHHHHHHHHHHHHHHHHHHHHHHCHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA