| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056255
Identifier: 89056255
GI number: 89056255
Start: 3845502
End: 3847196
Strand: Direct
Name: 89056255
Synonym: Jann_3764
Alternate gene names: NA
Gene position: 3845502-3847196 (Clockwise)
Preceding gene: 89056254
Following gene: 89056256
Centisome position: 89.06
GC content: 64.78
Gene sequence:
>1695_bases ATGAGCGAGGATATCGATCCGATCACGTTGGCGGTTCTTGCGGGGCGGATGGAGCAAATTGCCGATGAGATGGACGCGAC CCTGTTTCGCGCCGCCTTCAACCCCATCATCGCCGAGGCCCATGATGCCAGCCACGGCCTCTATCACGCGACCAGTGGCG ATACGCTGGTGCAAGGCAAGTCGGGCCTGCCGATCTTCGTCGGTGTTATGTCTTTCGCGGTCAAGGCTGTCATCGACAAG GCGGCAGAGGCGGGCGATCTGGCCGATGGCGACATCTATATCTTCAACGATGCGCATATGGGCGGCACACACCTGTCGGA CATGCGCCTTGTCCGGCCGTATTTCCGCGATGGGGCGTTGTTCTGCTACCTCGCCTCGGTCGGGCACTGGCACGATGTGG GCGGCGCGGTGCCCGGCAACTATAACCCGTCGGCCACCGATGTGTTTCAGGAAGCCTTCGTGCTGCCACCGGTCAAGCTG GCGCGTGGGGGCGAGATCCAGCAGGACATCATCGACATCCTTTTGCGCAACACCCGGCTGCCGCAATCGGCGATGGGCGA TCTGAACGGGCAACTTGGGGCGCTTGATCTGGGCGTGAAGCGCCTTGATGAATTGCTGGATGAATATGGGCCGAAGACGG TCCATGCGGGCCTTGATGCGCTCCAGGATCGGGCCGAGGTCTTGATGCGCGCGGAATTGTCGGACCTGCCGGACGGGCGT TGGGAGGCCGAAGATTTCCTCGACAATGACGGGATTACCGACACCGCCCTGCCGATCCGCGTGGCGCTGGAGATCACCGG CGACACGATGGTGCTCGACTTTGAGGGCACCGCACCCGTCACTGCGGGGCCAGTGAACATCGCCCTGCCCACGGCGGTGG CCACGGCCTATGTCGCGATCAAACACATCTTTCCCGACCTGCCCGCCAATGCAGGTGTGATGCGGCCCATCGAGGTGCGC GTGCCGGACGGCTCGCTGTTGTCGGCAGAGTTCCCGGCCCCGGTGGGCGGCTATACCGAAACCATCCTGCGCATGATCGA CGTGATGTTTTCCGCCGCCTCCCAAGCCGCGCCCGACCGGGTCGTGGCCAACGCCTATGGCACGATCAACGCGCTGTCCA TCGCCGGCAAGCGCGCGAATGGCGCGCCGTGGGTGATGTTCAGCTTCTACGGCGGCGGGCATGGCGGCAGCGTTGAGAGC GACGGGTTGAACCATGGCAATGCGCCGATCTCCACCGCGACGATCCCACCGATGGAGATCCTTGAGGCGGCCTATCCCGT GATGTTCCGGCAATGGGCACTGCGGCCCGACAGTGCCGGTGCCGGGGCCCATCGCGGCGGGCTTGGGGCCGTCTATGAAA TTGAAGTGCTGGAGGAGAAGGCCGAGGCGTTCCTGTTCGGGGAACGCGGGCGGTTTGCGCCGCAAGGTGTGACCGGCGGC GCGCCGGGTGCGATGAACGTCTTCACTTACGAGCAGGACGACGGCTGGAAGACCCCACCGCTGGCCTCCAAGATGCTCGG GATGCGATTGCGGAAGGGGCAGGCCGTGCGCCTTGAGACCCCCGGTGGTGGTGGGTATGGCGATCCTGCGGACCGTTCGC CCGAAGCCGTGGCGCGCGATGTGGCGCTTGGCTACCTGAGTGCTGAGGCGGCGACCGAAAGCTACGGGTCGGCCTGGCAG GAGTGCGCATCATGA
Upstream 100 bases:
>100_bases CTCCGTTTTCCGGGATCCGGTTCATTGATCGGTTTGAGGTCGCAGATGGTCTGCTGATCCGGCAGGACGTGTGGAACGAT CTGGCGGAGGCGCGCGGGAC
Downstream 100 bases:
>100_bases GCCGCATGATCGGCGTCGATGTTGGCGGCACATTCACCGATGTCTTCGTACTTGATGAGGACAGCGGCGTGGCCGAGGTC GCCAAGGTGCCGACGACGCG
Product: 5-oxoprolinase
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 564; Mature: 563
Protein sequence:
>564_residues MSEDIDPITLAVLAGRMEQIADEMDATLFRAAFNPIIAEAHDASHGLYHATSGDTLVQGKSGLPIFVGVMSFAVKAVIDK AAEAGDLADGDIYIFNDAHMGGTHLSDMRLVRPYFRDGALFCYLASVGHWHDVGGAVPGNYNPSATDVFQEAFVLPPVKL ARGGEIQQDIIDILLRNTRLPQSAMGDLNGQLGALDLGVKRLDELLDEYGPKTVHAGLDALQDRAEVLMRAELSDLPDGR WEAEDFLDNDGITDTALPIRVALEITGDTMVLDFEGTAPVTAGPVNIALPTAVATAYVAIKHIFPDLPANAGVMRPIEVR VPDGSLLSAEFPAPVGGYTETILRMIDVMFSAASQAAPDRVVANAYGTINALSIAGKRANGAPWVMFSFYGGGHGGSVES DGLNHGNAPISTATIPPMEILEAAYPVMFRQWALRPDSAGAGAHRGGLGAVYEIEVLEEKAEAFLFGERGRFAPQGVTGG APGAMNVFTYEQDDGWKTPPLASKMLGMRLRKGQAVRLETPGGGGYGDPADRSPEAVARDVALGYLSAEAATESYGSAWQ ECAS
Sequences:
>Translated_564_residues MSEDIDPITLAVLAGRMEQIADEMDATLFRAAFNPIIAEAHDASHGLYHATSGDTLVQGKSGLPIFVGVMSFAVKAVIDK AAEAGDLADGDIYIFNDAHMGGTHLSDMRLVRPYFRDGALFCYLASVGHWHDVGGAVPGNYNPSATDVFQEAFVLPPVKL ARGGEIQQDIIDILLRNTRLPQSAMGDLNGQLGALDLGVKRLDELLDEYGPKTVHAGLDALQDRAEVLMRAELSDLPDGR WEAEDFLDNDGITDTALPIRVALEITGDTMVLDFEGTAPVTAGPVNIALPTAVATAYVAIKHIFPDLPANAGVMRPIEVR VPDGSLLSAEFPAPVGGYTETILRMIDVMFSAASQAAPDRVVANAYGTINALSIAGKRANGAPWVMFSFYGGGHGGSVES DGLNHGNAPISTATIPPMEILEAAYPVMFRQWALRPDSAGAGAHRGGLGAVYEIEVLEEKAEAFLFGERGRFAPQGVTGG APGAMNVFTYEQDDGWKTPPLASKMLGMRLRKGQAVRLETPGGGGYGDPADRSPEAVARDVALGYLSAEAATESYGSAWQ ECAS >Mature_563_residues SEDIDPITLAVLAGRMEQIADEMDATLFRAAFNPIIAEAHDASHGLYHATSGDTLVQGKSGLPIFVGVMSFAVKAVIDKA AEAGDLADGDIYIFNDAHMGGTHLSDMRLVRPYFRDGALFCYLASVGHWHDVGGAVPGNYNPSATDVFQEAFVLPPVKLA RGGEIQQDIIDILLRNTRLPQSAMGDLNGQLGALDLGVKRLDELLDEYGPKTVHAGLDALQDRAEVLMRAELSDLPDGRW EAEDFLDNDGITDTALPIRVALEITGDTMVLDFEGTAPVTAGPVNIALPTAVATAYVAIKHIFPDLPANAGVMRPIEVRV PDGSLLSAEFPAPVGGYTETILRMIDVMFSAASQAAPDRVVANAYGTINALSIAGKRANGAPWVMFSFYGGGHGGSVESD GLNHGNAPISTATIPPMEILEAAYPVMFRQWALRPDSAGAGAHRGGLGAVYEIEVLEEKAEAFLFGERGRFAPQGVTGGA PGAMNVFTYEQDDGWKTPPLASKMLGMRLRKGQAVRLETPGGGGYGDPADRSPEAVARDVALGYLSAEAATESYGSAWQE CAS
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=554, Percent_Identity=31.4079422382672, Blast_Score=192, Evalue=5e-49, Organism=Caenorhabditis elegans, GI133901900, Length=555, Percent_Identity=31.3513513513514, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI133901902, Length=517, Percent_Identity=31.1411992263056, Blast_Score=195, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6322634, Length=560, Percent_Identity=27.1428571428571, Blast_Score=177, Evalue=3e-45, Organism=Drosophila melanogaster, GI45550492, Length=576, Percent_Identity=27.6041666666667, Blast_Score=171, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 59685; Mature: 59554
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDIDPITLAVLAGRMEQIADEMDATLFRAAFNPIIAEAHDASHGLYHATSGDTLVQGK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECC SGLPIFVGVMSFAVKAVIDKAAEAGDLADGDIYIFNDAHMGGTHLSDMRLVRPYFRDGAL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCE FCYLASVGHWHDVGGAVPGNYNPSATDVFQEAFVLPPVKLARGGEIQQDIIDILLRNTRL EEEEHHCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHCCCC PQSAMGDLNGQLGALDLGVKRLDELLDEYGPKTVHAGLDALQDRAEVLMRAELSDLPDGR CHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WEAEDFLDNDGITDTALPIRVALEITGDTMVLDFEGTAPVTAGPVNIALPTAVATAYVAI CCHHHHCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHH KHIFPDLPANAGVMRPIEVRVPDGSLLSAEFPAPVGGYTETILRMIDVMFSAASQAAPDR HHHCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC VVANAYGTINALSIAGKRANGAPWVMFSFYGGGHGGSVESDGLNHGNAPISTATIPPMEI EEHHCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LEAAYPVMFRQWALRPDSAGAGAHRGGLGAVYEIEVLEEKAEAFLFGERGRFAPQGVTGG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHEEEECCCCCCCCCCCCCC APGAMNVFTYEQDDGWKTPPLASKMLGMRLRKGQAVRLETPGGGGYGDPADRSPEAVARD CCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHH VALGYLSAEAATESYGSAWQECAS HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEDIDPITLAVLAGRMEQIADEMDATLFRAAFNPIIAEAHDASHGLYHATSGDTLVQGK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEECC SGLPIFVGVMSFAVKAVIDKAAEAGDLADGDIYIFNDAHMGGTHLSDMRLVRPYFRDGAL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCE FCYLASVGHWHDVGGAVPGNYNPSATDVFQEAFVLPPVKLARGGEIQQDIIDILLRNTRL EEEEHHCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHCCCC PQSAMGDLNGQLGALDLGVKRLDELLDEYGPKTVHAGLDALQDRAEVLMRAELSDLPDGR CHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WEAEDFLDNDGITDTALPIRVALEITGDTMVLDFEGTAPVTAGPVNIALPTAVATAYVAI CCHHHHCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHH KHIFPDLPANAGVMRPIEVRVPDGSLLSAEFPAPVGGYTETILRMIDVMFSAASQAAPDR HHHCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC VVANAYGTINALSIAGKRANGAPWVMFSFYGGGHGGSVESDGLNHGNAPISTATIPPMEI EEHHCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LEAAYPVMFRQWALRPDSAGAGAHRGGLGAVYEIEVLEEKAEAFLFGERGRFAPQGVTGG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHEEEECCCCCCCCCCCCCC APGAMNVFTYEQDDGWKTPPLASKMLGMRLRKGQAVRLETPGGGGYGDPADRSPEAVARD CCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHH VALGYLSAEAATESYGSAWQECAS HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]