| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056193
Identifier: 89056193
GI number: 89056193
Start: 3785338
End: 3786333
Strand: Direct
Name: 89056193
Synonym: Jann_3702
Alternate gene names: NA
Gene position: 3785338-3786333 (Clockwise)
Preceding gene: 89056189
Following gene: 89056194
Centisome position: 87.66
GC content: 65.86
Gene sequence:
>996_bases ATGAGCGATACACGCGCAGAAATCCAAGCCCTTTTGGACGGTTTGTTCCGGGCAAGCCCCGAGGATTTACAGGGACTTGC GGAGCGCACCTTTCATGCGGAGGCGCGGATCGACGTCTCAACCCCCATCGGCACGTTGACGGGGCCGCAGGAGATCGTGG AGGGCCTGATCCTGCCGCTCAGGGCCGCATTGGAACCTGCAAGACGGCGCGACCTGATGATCTTTGGCGGACAGAATCGC CGCGACTATGGCGGCGAATGGGTCACGGGCCTGACGCATATAACGGGGCTGTTCACCGCGCCGCTTTGGGGCGTGCGTCC GTCGGGCAAGCTGGCCTATCTGCGGATCGGGGAGTTCTGGCGCGTGGAGGATGGCCGGATCGCGGAGGGGCGATTGATCG TCGATCTGCTGGACCTGATCTTCCAGTCGGGCATCTGGCCGCTGGCCGAGGCGCATTACGGCGCGCCCATCGTCTTTCCC GCCCCGGCCACACAAGACGGGCTGTGCCCCGAAAATCGCGCCGATGGAGCCGCCGCCCTGGATGTGGTGGAAGCGATGCT GTCGGCCCTGCATGTCTATGACCCCGACAGTTTCGGGTCCGACGGCCAGGTGGGCGCCGGCGGCACCTGGGCCCCGGATT TCGCCTGGTACGGGCCCGGCGGCATCGGGTCGACCGTGGCCTGGCGCGGGTTTGTCGACCACCACCGCGCGCCGTTCCTG CGCGCCTTCCCCGACCGCAAGGGCGGCAACCACTATGCCCGCGTGGGGGATGGGAATTATGCCGCCGTCTCGGGCTGGCC ATCGATGACGATGACCCACCGCGAGACCTATCTGGGCGTGCCTGCAACCGACACGGCCCTGACGCTGCGGGTGATGGATT TCTACCGCGTCGAGGACGGCCTGATCGCAGAGAACTGGGTGCTGCTGGATTACATCCATCTATTGGAGCAGATGGGCGTG GATGTGATCGCGCGGGCCGCCGAGATGGATCTGTGA
Upstream 100 bases:
>100_bases TTCACCATGCGAATTTTGCATAGGTTTGCAAGATTACGCTAGTGTCCCCTTTGGCAATCTGGCAAGCCTTTTTCCGATCA CAGCAGAGGCCGCGACCAGC
Downstream 100 bases:
>100_bases ACTAATTTACTGCCGGGCGTCATAGCGGTAAAGAAACGCCACATGATTTCACGCGGCGCAAAGTAACCATTTCTGATCCG CACATTCCCTGCCATGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSDTRAEIQALLDGLFRASPEDLQGLAERTFHAEARIDVSTPIGTLTGPQEIVEGLILPLRAALEPARRRDLMIFGGQNR RDYGGEWVTGLTHITGLFTAPLWGVRPSGKLAYLRIGEFWRVEDGRIAEGRLIVDLLDLIFQSGIWPLAEAHYGAPIVFP APATQDGLCPENRADGAAALDVVEAMLSALHVYDPDSFGSDGQVGAGGTWAPDFAWYGPGGIGSTVAWRGFVDHHRAPFL RAFPDRKGGNHYARVGDGNYAAVSGWPSMTMTHRETYLGVPATDTALTLRVMDFYRVEDGLIAENWVLLDYIHLLEQMGV DVIARAAEMDL
Sequences:
>Translated_331_residues MSDTRAEIQALLDGLFRASPEDLQGLAERTFHAEARIDVSTPIGTLTGPQEIVEGLILPLRAALEPARRRDLMIFGGQNR RDYGGEWVTGLTHITGLFTAPLWGVRPSGKLAYLRIGEFWRVEDGRIAEGRLIVDLLDLIFQSGIWPLAEAHYGAPIVFP APATQDGLCPENRADGAAALDVVEAMLSALHVYDPDSFGSDGQVGAGGTWAPDFAWYGPGGIGSTVAWRGFVDHHRAPFL RAFPDRKGGNHYARVGDGNYAAVSGWPSMTMTHRETYLGVPATDTALTLRVMDFYRVEDGLIAENWVLLDYIHLLEQMGV DVIARAAEMDL >Mature_330_residues SDTRAEIQALLDGLFRASPEDLQGLAERTFHAEARIDVSTPIGTLTGPQEIVEGLILPLRAALEPARRRDLMIFGGQNRR DYGGEWVTGLTHITGLFTAPLWGVRPSGKLAYLRIGEFWRVEDGRIAEGRLIVDLLDLIFQSGIWPLAEAHYGAPIVFPA PATQDGLCPENRADGAAALDVVEAMLSALHVYDPDSFGSDGQVGAGGTWAPDFAWYGPGGIGSTVAWRGFVDHHRAPFLR AFPDRKGGNHYARVGDGNYAAVSGWPSMTMTHRETYLGVPATDTALTLRVMDFYRVEDGLIAENWVLLDYIHLLEQMGVD VIARAAEMDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36171; Mature: 36040
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTRAEIQALLDGLFRASPEDLQGLAERTFHAEARIDVSTPIGTLTGPQEIVEGLILPL CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHH RAALEPARRRDLMIFGGQNRRDYGGEWVTGLTHITGLFTAPLWGVRPSGKLAYLRIGEFW HHHHCHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEE RVEDGRIAEGRLIVDLLDLIFQSGIWPLAEAHYGAPIVFPAPATQDGLCPENRADGAAAL ECCCCCEECCCHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHH DVVEAMLSALHVYDPDSFGSDGQVGAGGTWAPDFAWYGPGGIGSTVAWRGFVDHHRAPFL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCHH RAFPDRKGGNHYARVGDGNYAAVSGWPSMTMTHRETYLGVPATDTALTLRVMDFYRVEDG HHCCCCCCCCCEEEECCCCEEEECCCCCCEEECCCEEECCCCCCHHEEEEHHHHHHCCCC LIAENWVLLDYIHLLEQMGVDVIARAAEMDL CEECCHHHHHHHHHHHHHCHHHHHHHHHCCC >Mature Secondary Structure SDTRAEIQALLDGLFRASPEDLQGLAERTFHAEARIDVSTPIGTLTGPQEIVEGLILPL CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHH RAALEPARRRDLMIFGGQNRRDYGGEWVTGLTHITGLFTAPLWGVRPSGKLAYLRIGEFW HHHHCHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEE RVEDGRIAEGRLIVDLLDLIFQSGIWPLAEAHYGAPIVFPAPATQDGLCPENRADGAAAL ECCCCCEECCCHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHH DVVEAMLSALHVYDPDSFGSDGQVGAGGTWAPDFAWYGPGGIGSTVAWRGFVDHHRAPFL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCHH RAFPDRKGGNHYARVGDGNYAAVSGWPSMTMTHRETYLGVPATDTALTLRVMDFYRVEDG HHCCCCCCCCCEEEECCCCEEEECCCCCCEEECCCEEECCCCCCHHEEEEHHHHHHCCCC LIAENWVLLDYIHLLEQMGVDVIARAAEMDL CEECCHHHHHHHHHHHHHCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA