Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056193

Identifier: 89056193

GI number: 89056193

Start: 3785338

End: 3786333

Strand: Direct

Name: 89056193

Synonym: Jann_3702

Alternate gene names: NA

Gene position: 3785338-3786333 (Clockwise)

Preceding gene: 89056189

Following gene: 89056194

Centisome position: 87.66

GC content: 65.86

Gene sequence:

>996_bases
ATGAGCGATACACGCGCAGAAATCCAAGCCCTTTTGGACGGTTTGTTCCGGGCAAGCCCCGAGGATTTACAGGGACTTGC
GGAGCGCACCTTTCATGCGGAGGCGCGGATCGACGTCTCAACCCCCATCGGCACGTTGACGGGGCCGCAGGAGATCGTGG
AGGGCCTGATCCTGCCGCTCAGGGCCGCATTGGAACCTGCAAGACGGCGCGACCTGATGATCTTTGGCGGACAGAATCGC
CGCGACTATGGCGGCGAATGGGTCACGGGCCTGACGCATATAACGGGGCTGTTCACCGCGCCGCTTTGGGGCGTGCGTCC
GTCGGGCAAGCTGGCCTATCTGCGGATCGGGGAGTTCTGGCGCGTGGAGGATGGCCGGATCGCGGAGGGGCGATTGATCG
TCGATCTGCTGGACCTGATCTTCCAGTCGGGCATCTGGCCGCTGGCCGAGGCGCATTACGGCGCGCCCATCGTCTTTCCC
GCCCCGGCCACACAAGACGGGCTGTGCCCCGAAAATCGCGCCGATGGAGCCGCCGCCCTGGATGTGGTGGAAGCGATGCT
GTCGGCCCTGCATGTCTATGACCCCGACAGTTTCGGGTCCGACGGCCAGGTGGGCGCCGGCGGCACCTGGGCCCCGGATT
TCGCCTGGTACGGGCCCGGCGGCATCGGGTCGACCGTGGCCTGGCGCGGGTTTGTCGACCACCACCGCGCGCCGTTCCTG
CGCGCCTTCCCCGACCGCAAGGGCGGCAACCACTATGCCCGCGTGGGGGATGGGAATTATGCCGCCGTCTCGGGCTGGCC
ATCGATGACGATGACCCACCGCGAGACCTATCTGGGCGTGCCTGCAACCGACACGGCCCTGACGCTGCGGGTGATGGATT
TCTACCGCGTCGAGGACGGCCTGATCGCAGAGAACTGGGTGCTGCTGGATTACATCCATCTATTGGAGCAGATGGGCGTG
GATGTGATCGCGCGGGCCGCCGAGATGGATCTGTGA

Upstream 100 bases:

>100_bases
TTCACCATGCGAATTTTGCATAGGTTTGCAAGATTACGCTAGTGTCCCCTTTGGCAATCTGGCAAGCCTTTTTCCGATCA
CAGCAGAGGCCGCGACCAGC

Downstream 100 bases:

>100_bases
ACTAATTTACTGCCGGGCGTCATAGCGGTAAAGAAACGCCACATGATTTCACGCGGCGCAAAGTAACCATTTCTGATCCG
CACATTCCCTGCCATGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSDTRAEIQALLDGLFRASPEDLQGLAERTFHAEARIDVSTPIGTLTGPQEIVEGLILPLRAALEPARRRDLMIFGGQNR
RDYGGEWVTGLTHITGLFTAPLWGVRPSGKLAYLRIGEFWRVEDGRIAEGRLIVDLLDLIFQSGIWPLAEAHYGAPIVFP
APATQDGLCPENRADGAAALDVVEAMLSALHVYDPDSFGSDGQVGAGGTWAPDFAWYGPGGIGSTVAWRGFVDHHRAPFL
RAFPDRKGGNHYARVGDGNYAAVSGWPSMTMTHRETYLGVPATDTALTLRVMDFYRVEDGLIAENWVLLDYIHLLEQMGV
DVIARAAEMDL

Sequences:

>Translated_331_residues
MSDTRAEIQALLDGLFRASPEDLQGLAERTFHAEARIDVSTPIGTLTGPQEIVEGLILPLRAALEPARRRDLMIFGGQNR
RDYGGEWVTGLTHITGLFTAPLWGVRPSGKLAYLRIGEFWRVEDGRIAEGRLIVDLLDLIFQSGIWPLAEAHYGAPIVFP
APATQDGLCPENRADGAAALDVVEAMLSALHVYDPDSFGSDGQVGAGGTWAPDFAWYGPGGIGSTVAWRGFVDHHRAPFL
RAFPDRKGGNHYARVGDGNYAAVSGWPSMTMTHRETYLGVPATDTALTLRVMDFYRVEDGLIAENWVLLDYIHLLEQMGV
DVIARAAEMDL
>Mature_330_residues
SDTRAEIQALLDGLFRASPEDLQGLAERTFHAEARIDVSTPIGTLTGPQEIVEGLILPLRAALEPARRRDLMIFGGQNRR
DYGGEWVTGLTHITGLFTAPLWGVRPSGKLAYLRIGEFWRVEDGRIAEGRLIVDLLDLIFQSGIWPLAEAHYGAPIVFPA
PATQDGLCPENRADGAAALDVVEAMLSALHVYDPDSFGSDGQVGAGGTWAPDFAWYGPGGIGSTVAWRGFVDHHRAPFLR
AFPDRKGGNHYARVGDGNYAAVSGWPSMTMTHRETYLGVPATDTALTLRVMDFYRVEDGLIAENWVLLDYIHLLEQMGVD
VIARAAEMDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36171; Mature: 36040

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTRAEIQALLDGLFRASPEDLQGLAERTFHAEARIDVSTPIGTLTGPQEIVEGLILPL
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHH
RAALEPARRRDLMIFGGQNRRDYGGEWVTGLTHITGLFTAPLWGVRPSGKLAYLRIGEFW
HHHHCHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEE
RVEDGRIAEGRLIVDLLDLIFQSGIWPLAEAHYGAPIVFPAPATQDGLCPENRADGAAAL
ECCCCCEECCCHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHH
DVVEAMLSALHVYDPDSFGSDGQVGAGGTWAPDFAWYGPGGIGSTVAWRGFVDHHRAPFL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCHH
RAFPDRKGGNHYARVGDGNYAAVSGWPSMTMTHRETYLGVPATDTALTLRVMDFYRVEDG
HHCCCCCCCCCEEEECCCCEEEECCCCCCEEECCCEEECCCCCCHHEEEEHHHHHHCCCC
LIAENWVLLDYIHLLEQMGVDVIARAAEMDL
CEECCHHHHHHHHHHHHHCHHHHHHHHHCCC
>Mature Secondary Structure 
SDTRAEIQALLDGLFRASPEDLQGLAERTFHAEARIDVSTPIGTLTGPQEIVEGLILPL
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHH
RAALEPARRRDLMIFGGQNRRDYGGEWVTGLTHITGLFTAPLWGVRPSGKLAYLRIGEFW
HHHHCHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEE
RVEDGRIAEGRLIVDLLDLIFQSGIWPLAEAHYGAPIVFPAPATQDGLCPENRADGAAAL
ECCCCCEECCCHHHHHHHHHHHCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHH
DVVEAMLSALHVYDPDSFGSDGQVGAGGTWAPDFAWYGPGGIGSTVAWRGFVDHHRAPFL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCHH
RAFPDRKGGNHYARVGDGNYAAVSGWPSMTMTHRETYLGVPATDTALTLRVMDFYRVEDG
HHCCCCCCCCCEEEECCCCEEEECCCCCCEEECCCEEECCCCCCHHEEEEHHHHHHCCCC
LIAENWVLLDYIHLLEQMGVDVIARAAEMDL
CEECCHHHHHHHHHHHHHCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA