| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056164
Identifier: 89056164
GI number: 89056164
Start: 3750183
End: 3750968
Strand: Direct
Name: 89056164
Synonym: Jann_3673
Alternate gene names: NA
Gene position: 3750183-3750968 (Clockwise)
Preceding gene: 89056163
Following gene: 89056165
Centisome position: 86.85
GC content: 61.58
Gene sequence:
>786_bases ATGACACGACTTACACCGCTTGCAGCCGCCCTCATAGTCGTTGCGCCAACCCTCACATTTGCCGCCATGGGCTATGTCGA GGCGTTCGATGCCAGTGCCCCCGCTGGCACCAATCTCCAGCATGTCGACGCTGATGTCGCCAACACCACCTTCGATGCAG CTGAACAGATGAGCCTGACATTTATCTTCCACATCGATGAGGGATTGACCGAACAGGATGTGTTCTACGAACCCGTTGCA GGCTCTGGCGAGGTGTTCCGTCCAACCGGCGCCACGCGGGAAATGGACGCGCCCCTTTACGCGCCCGCAGTGGCCGTCCC CCATACGCCGTTGCAGACGGAGAACACGGGTCCTTGGCCGCGCGGCCGCGCGCTTGGCATCACTTTGGGTGAATGGTTTG CGGCAACGGGGCAAGGCAGTTACGTCTGCGAGAACGGCGTCGGTCACGTCGACATCAGGTTTGAGAACCTCGTGCCGGAG GGGCTCTACACGATGTGGCACGACTTCGCGATCTGGCCACCCACTGACCCGTTCATTGGGTTCTACGACACGCCGTTCGG CGCACGGGATGGCTCCGAGAATGCGTTTGTCACCGATGCCGATGGCAACGCGCATTTTGTCCGCACGATCACGCCCTGCC TCCAACTCTCAGGCGAGCAGCTGATCTCGGAACTGGCGATTGCCTGGCACAGTGACGGCGAAACCCACGGCCACACGCCC GGCGAGTTTTCGACCAACACGCATGTCCAGCTATACGTGCCCCTTCCGACGCGGGCGGGCCTGTAA
Upstream 100 bases:
>100_bases TCCCCAACCTACCCCACAACCGCAAGGCGTGGCCGACTAGGTCTGCCTTCCACGTACCGACCCACAACCGGCAGATTGCC ATAAACACAGGAGTAAACTG
Downstream 100 bases:
>100_bases GACCTCCAGCATGCGGCGCACCTCCCTTGGTCTGCGCCGCACGTTATCCAAATTGACACAATCATTTCAGATCCGAGGAC GTTCCAATGGGTGTGCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTRLTPLAAALIVVAPTLTFAAMGYVEAFDASAPAGTNLQHVDADVANTTFDAAEQMSLTFIFHIDEGLTEQDVFYEPVA GSGEVFRPTGATREMDAPLYAPAVAVPHTPLQTENTGPWPRGRALGITLGEWFAATGQGSYVCENGVGHVDIRFENLVPE GLYTMWHDFAIWPPTDPFIGFYDTPFGARDGSENAFVTDADGNAHFVRTITPCLQLSGEQLISELAIAWHSDGETHGHTP GEFSTNTHVQLYVPLPTRAGL
Sequences:
>Translated_261_residues MTRLTPLAAALIVVAPTLTFAAMGYVEAFDASAPAGTNLQHVDADVANTTFDAAEQMSLTFIFHIDEGLTEQDVFYEPVA GSGEVFRPTGATREMDAPLYAPAVAVPHTPLQTENTGPWPRGRALGITLGEWFAATGQGSYVCENGVGHVDIRFENLVPE GLYTMWHDFAIWPPTDPFIGFYDTPFGARDGSENAFVTDADGNAHFVRTITPCLQLSGEQLISELAIAWHSDGETHGHTP GEFSTNTHVQLYVPLPTRAGL >Mature_260_residues TRLTPLAAALIVVAPTLTFAAMGYVEAFDASAPAGTNLQHVDADVANTTFDAAEQMSLTFIFHIDEGLTEQDVFYEPVAG SGEVFRPTGATREMDAPLYAPAVAVPHTPLQTENTGPWPRGRALGITLGEWFAATGQGSYVCENGVGHVDIRFENLVPEG LYTMWHDFAIWPPTDPFIGFYDTPFGARDGSENAFVTDADGNAHFVRTITPCLQLSGEQLISELAIAWHSDGETHGHTPG EFSTNTHVQLYVPLPTRAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28153; Mature: 28021
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLTPLAAALIVVAPTLTFAAMGYVEAFDASAPAGTNLQHVDADVANTTFDAAEQMSLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHCCHHHHHHCEEEE FIFHIDEGLTEQDVFYEPVAGSGEVFRPTGATREMDAPLYAPAVAVPHTPLQTENTGPWP EEEEECCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC RGRALGITLGEWFAATGQGSYVCENGVGHVDIRFENLVPEGLYTMWHDFAIWPPTDPFIG CCCEEEEEHHHHEEECCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCEEECCCCCCCEE FYDTPFGARDGSENAFVTDADGNAHFVRTITPCLQLSGEQLISELAIAWHSDGETHGHTP EECCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHHCCHHHHHHHHHHEECCCCCCCCCCC GEFSTNTHVQLYVPLPTRAGL CCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure TRLTPLAAALIVVAPTLTFAAMGYVEAFDASAPAGTNLQHVDADVANTTFDAAEQMSLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHCCHHHHHHCEEEE FIFHIDEGLTEQDVFYEPVAGSGEVFRPTGATREMDAPLYAPAVAVPHTPLQTENTGPWP EEEEECCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC RGRALGITLGEWFAATGQGSYVCENGVGHVDIRFENLVPEGLYTMWHDFAIWPPTDPFIG CCCEEEEEHHHHEEECCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCEEECCCCCCCEE FYDTPFGARDGSENAFVTDADGNAHFVRTITPCLQLSGEQLISELAIAWHSDGETHGHTP EECCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHHCCHHHHHHHHHHEECCCCCCCCCCC GEFSTNTHVQLYVPLPTRAGL CCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA