| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056161
Identifier: 89056161
GI number: 89056161
Start: 3747276
End: 3747614
Strand: Direct
Name: 89056161
Synonym: Jann_3670
Alternate gene names: NA
Gene position: 3747276-3747614 (Clockwise)
Preceding gene: 89056155
Following gene: 89056162
Centisome position: 86.78
GC content: 59.0
Gene sequence:
>339_bases ATGAAATTCACGCTTGCCCTGCTTGCGGCAACCGCAAGCCTCACGTCATGGGCCATCGCGGCAGACCATCACATCATCAT CCGAGGTATGAGCTTTCAGCCCAGCCATATGACAGTGTCAGTCGGCGACACGGTGATGGTCACAAACGCCGATGATCAGC CGCACACAGTGACCGCCCTCGCGCGGGGCCTTGATACTGCGCAGGTGCAGGGCGGCGCGTTCGACACTGGGCTCATTGCC CCCGATGACATGGTAGAGGTCAGGATCACTCGGTCGGGCGTGATTGATTTCTACTGTCAGTATCATCCGACCATGCTCGG CCGCATCACCGCTGAATAG
Upstream 100 bases:
>100_bases TCCCCAAGTTTTCCTCAGGTGACCGTCAAGCTTCGCCATCCCACTCAGTCTAAGCCGGTCTGGCGGCGCACCGCAAGTTG TCACCAATGGAGTCACGATC
Downstream 100 bases:
>100_bases CCTTCTCTCCATTTCAAAAATTTGACCCCAATCCGATAGGACATCCCATGACACGTTTTCGATCCACTCTGCCTCAGGTC AACGGCACCACCCTGCTGAC
Product: blue (type1) copper domain-containing protein
Products: NA
Alternate protein names: Blue Copper Domain
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKFTLALLAATASLTSWAIAADHHIIIRGMSFQPSHMTVSVGDTVMVTNADDQPHTVTALARGLDTAQVQGGAFDTGLIA PDDMVEVRITRSGVIDFYCQYHPTMLGRITAE
Sequences:
>Translated_112_residues MKFTLALLAATASLTSWAIAADHHIIIRGMSFQPSHMTVSVGDTVMVTNADDQPHTVTALARGLDTAQVQGGAFDTGLIA PDDMVEVRITRSGVIDFYCQYHPTMLGRITAE >Mature_112_residues MKFTLALLAATASLTSWAIAADHHIIIRGMSFQPSHMTVSVGDTVMVTNADDQPHTVTALARGLDTAQVQGGAFDTGLIA PDDMVEVRITRSGVIDFYCQYHPTMLGRITAE
Specific function: Unknown
COG id: COG3794
COG function: function code C; Plastocyanin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12033; Mature: 12033
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTLALLAATASLTSWAIAADHHIIIRGMSFQPSHMTVSVGDTVMVTNADDQPHTVTAL CEEEEEEEHHHHCCCEEEEECCCEEEEEECCCCCCEEEEEECCEEEEECCCCCCCCHHHH ARGLDTAQVQGGAFDTGLIAPDDMVEVRITRSGVIDFYCQYHPTMLGRITAE HCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCEEEEEEECC >Mature Secondary Structure MKFTLALLAATASLTSWAIAADHHIIIRGMSFQPSHMTVSVGDTVMVTNADDQPHTVTAL CEEEEEEEHHHHCCCEEEEECCCEEEEEECCCCCCEEEEEECCEEEEECCCCCCCCHHHH ARGLDTAQVQGGAFDTGLIAPDDMVEVRITRSGVIDFYCQYHPTMLGRITAE HCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA