| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056103
Identifier: 89056103
GI number: 89056103
Start: 3686201
End: 3686926
Strand: Direct
Name: 89056103
Synonym: Jann_3612
Alternate gene names: NA
Gene position: 3686201-3686926 (Clockwise)
Preceding gene: 89056097
Following gene: 89056104
Centisome position: 85.37
GC content: 63.64
Gene sequence:
>726_bases ATGCGTTGCGCGGGGGTCACGGTTTTGGGTCTTGGCATGGTGGTGGGCCTTTTCGGCGCGCCTGCCAGTGCCGGTCCGTG GGCGCGAAGTGTCGGCGATGTGTTCGTGTCGTTTCAGGTCTCGGCCGAGGAAGCGCCCTCTGACGTGATGGCCGGTCTGT TTGAGCCGGAAACCTACCTAAGTGCGTATGGAGAGGTCGGCCTTGGCCGCAGCCTGACCCTGGGCGTCGATCTGGGCCGG GGCGAACTGAGCCGCCAAGCGGTGGGCTTTTTGCGCTATTCTCTCAGCCCACCGGATGCGACCTGGCAATTTGCCCTGGA TGCAGGGCTGGGTGTCCGCCGATTGGGCGAAGAGGACGCCCATGGTCTGGTCCGTGTCGGTGCGTCCATCGGGCGTGGGT TCGGCGGCGGAGGGGACGCATGGTATATGCCCCTGCGCCATGAAGGGGGATGGGCCACGCTCGATCTGACGGCGCTCTAT GACCTGGAGATCGAAGAGCCGATCCTGCAGGCCGAGGGTACATTGGGCTTCAGCCTGACCGACCGCGCCTCAATGGTGTT TTCGGTCAAAGCCGAAGAATGGCCCGATGCGGACCTGTTGGTCACTGCCTCCCCCTCCTTCGTTTTTCAAGTTTGGGAGG GGACCTCGCTGCGTCTTGGGGCGCGAGGGGCGCTGACCGGGAGCGATACTATCGGCATCTCACTCTCGCTTTGGCAGGAG TTCTAA
Upstream 100 bases:
>100_bases CGAATCTATAATGTGGCAGGTCTCAAACATGGCTGCTCGAATGCGACACGGGCAAGGCGCGTTAGGGATTTGTTAACCAT AGGTGGGTCTAATATGAGAC
Downstream 100 bases:
>100_bases ACCTACCCATTGCGTGCGGCACGCGGGCCAAAAGCCCTTCGCCTGCGCCCGACCCGCACTCGCACTCGCCCCGGACGATA TCGGCTGCTATCGTATCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MRCAGVTVLGLGMVVGLFGAPASAGPWARSVGDVFVSFQVSAEEAPSDVMAGLFEPETYLSAYGEVGLGRSLTLGVDLGR GELSRQAVGFLRYSLSPPDATWQFALDAGLGVRRLGEEDAHGLVRVGASIGRGFGGGGDAWYMPLRHEGGWATLDLTALY DLEIEEPILQAEGTLGFSLTDRASMVFSVKAEEWPDADLLVTASPSFVFQVWEGTSLRLGARGALTGSDTIGISLSLWQE F
Sequences:
>Translated_241_residues MRCAGVTVLGLGMVVGLFGAPASAGPWARSVGDVFVSFQVSAEEAPSDVMAGLFEPETYLSAYGEVGLGRSLTLGVDLGR GELSRQAVGFLRYSLSPPDATWQFALDAGLGVRRLGEEDAHGLVRVGASIGRGFGGGGDAWYMPLRHEGGWATLDLTALY DLEIEEPILQAEGTLGFSLTDRASMVFSVKAEEWPDADLLVTASPSFVFQVWEGTSLRLGARGALTGSDTIGISLSLWQE F >Mature_241_residues MRCAGVTVLGLGMVVGLFGAPASAGPWARSVGDVFVSFQVSAEEAPSDVMAGLFEPETYLSAYGEVGLGRSLTLGVDLGR GELSRQAVGFLRYSLSPPDATWQFALDAGLGVRRLGEEDAHGLVRVGASIGRGFGGGGDAWYMPLRHEGGWATLDLTALY DLEIEEPILQAEGTLGFSLTDRASMVFSVKAEEWPDADLLVTASPSFVFQVWEGTSLRLGARGALTGSDTIGISLSLWQE F
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25468; Mature: 25468
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCAGVTVLGLGMVVGLFGAPASAGPWARSVGDVFVSFQVSAEEAPSDVMAGLFEPETYL CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEECCCCCCHHHHHHCCCCHHHH SAYGEVGLGRSLTLGVDLGRGELSRQAVGFLRYSLSPPDATWQFALDAGLGVRRLGEEDA HHHCCCCCCCEEEEEEECCCCHHHHHHHEEEEEECCCCCCEEEEEEECCCCHHHCCCCCC HGLVRVGASIGRGFGGGGDAWYMPLRHEGGWATLDLTALYDLEIEEPILQAEGTLGFSLT CCEEEECHHHCCCCCCCCCEEEEEEEECCCEEEEEEEEEEECCCCCCHHHCCCCEEEEEC DRASMVFSVKAEEWPDADLLVTASPSFVFQVWEGTSLRLGARGALTGSDTIGISLSLWQE CCCEEEEEEECCCCCCCCEEEEECCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEEEEC F C >Mature Secondary Structure MRCAGVTVLGLGMVVGLFGAPASAGPWARSVGDVFVSFQVSAEEAPSDVMAGLFEPETYL CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEECCCCCCHHHHHHCCCCHHHH SAYGEVGLGRSLTLGVDLGRGELSRQAVGFLRYSLSPPDATWQFALDAGLGVRRLGEEDA HHHCCCCCCCEEEEEEECCCCHHHHHHHEEEEEECCCCCCEEEEEEECCCCHHHCCCCCC HGLVRVGASIGRGFGGGGDAWYMPLRHEGGWATLDLTALYDLEIEEPILQAEGTLGFSLT CCEEEECHHHCCCCCCCCCEEEEEEEECCCEEEEEEEEEEECCCCCCHHHCCCCEEEEEC DRASMVFSVKAEEWPDADLLVTASPSFVFQVWEGTSLRLGARGALTGSDTIGISLSLWQE CCCEEEEEEECCCCCCCCEEEEECCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEEEEC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA