| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89056066
Identifier: 89056066
GI number: 89056066
Start: 3650290
End: 3650955
Strand: Direct
Name: 89056066
Synonym: Jann_3575
Alternate gene names: NA
Gene position: 3650290-3650955 (Clockwise)
Preceding gene: 89056063
Following gene: 89056067
Centisome position: 84.54
GC content: 55.71
Gene sequence:
>666_bases ATGTCGAATATTGCGGGCAAAGCATATGCAATGAACGTATTAACCCCCAGCAATTCAAAGATTTCCTGGGTTAATCGCTT GCTGTTCATGGCCTCTCGTGGGCTCCCGAAAAATCTGATGGGGCTGTTGGGCCTGTCGCTGATTCACTTCGCGCGCTGGG TGATCATCAAGCCGCGCGACTGGCCAGACCTTGGTCAGGGCAAAGAGAAACTGCAACACGACTACATGCTGTTTTGCTCC AATTTCAACGGTACGTGGGACCAATATATCGACGCATTCTCGGACGGTATTCCCGGCGGACTGGACATGTTCTGGTACGC GTCTATCGGCTATCCCGAGTCGATCCCGATCACGCCATTTAAGGATTATATCACGTTCAATCAGGTCAATACCGATTATT ACTACAACGCCACGCCCGGCTCGGCGCAGCGGGACGTCAAGACGAGCCTGCTGGTTTTTGATCAAGTGTTGAAGCTTGCT GATATGCACGCCACAGCCTCGCCCGAGGATTTCGCAGCGGCCTATCATAAGGCGGCACTGAAGATGCAGAAGGGCCTCGG CGATCCGGGCTTTGGGCCGGTCGCAAGCCTCGACACGGAGCGGGCCGAGGTCAACCGCAGGGACCTTCTTCCACCCTCTG GTGTGGGGGGACCTGCCGATGCCTGA
Upstream 100 bases:
>100_bases TCCTCAACTCGCGGTAACGTTGCGGCGTATTATTTATCACCTGAGTGGGCGTTTTTTTGCCCCCGGTGTGCGTATCCCTT TTTAAATTAGTGAGGTTCCC
Downstream 100 bases:
>100_bases TTTTGACAGCGGACACATTTTCCTGACCACATTGGCTCCGATCAAACCGGGCGCGCCCGCGGACCATCCCCAGTCTTCCT ATGAGCAGCGCGCGCGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSNIAGKAYAMNVLTPSNSKISWVNRLLFMASRGLPKNLMGLLGLSLIHFARWVIIKPRDWPDLGQGKEKLQHDYMLFCS NFNGTWDQYIDAFSDGIPGGLDMFWYASIGYPESIPITPFKDYITFNQVNTDYYYNATPGSAQRDVKTSLLVFDQVLKLA DMHATASPEDFAAAYHKAALKMQKGLGDPGFGPVASLDTERAEVNRRDLLPPSGVGGPADA
Sequences:
>Translated_221_residues MSNIAGKAYAMNVLTPSNSKISWVNRLLFMASRGLPKNLMGLLGLSLIHFARWVIIKPRDWPDLGQGKEKLQHDYMLFCS NFNGTWDQYIDAFSDGIPGGLDMFWYASIGYPESIPITPFKDYITFNQVNTDYYYNATPGSAQRDVKTSLLVFDQVLKLA DMHATASPEDFAAAYHKAALKMQKGLGDPGFGPVASLDTERAEVNRRDLLPPSGVGGPADA >Mature_220_residues SNIAGKAYAMNVLTPSNSKISWVNRLLFMASRGLPKNLMGLLGLSLIHFARWVIIKPRDWPDLGQGKEKLQHDYMLFCSN FNGTWDQYIDAFSDGIPGGLDMFWYASIGYPESIPITPFKDYITFNQVNTDYYYNATPGSAQRDVKTSLLVFDQVLKLAD MHATASPEDFAAAYHKAALKMQKGLGDPGFGPVASLDTERAEVNRRDLLPPSGVGGPADA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24418; Mature: 24287
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIAGKAYAMNVLTPSNSKISWVNRLLFMASRGLPKNLMGLLGLSLIHFARWVIIKPRD CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCC WPDLGQGKEKLQHDYMLFCSNFNGTWDQYIDAFSDGIPGGLDMFWYASIGYPESIPITPF CCCCCCHHHHHHHCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCH KDYITFNQVNTDYYYNATPGSAQRDVKTSLLVFDQVLKLADMHATASPEDFAAAYHKAAL HHHEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH KMQKGLGDPGFGPVASLDTERAEVNRRDLLPPSGVGGPADA HHHHCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCC >Mature Secondary Structure SNIAGKAYAMNVLTPSNSKISWVNRLLFMASRGLPKNLMGLLGLSLIHFARWVIIKPRD CCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCC WPDLGQGKEKLQHDYMLFCSNFNGTWDQYIDAFSDGIPGGLDMFWYASIGYPESIPITPF CCCCCCHHHHHHHCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCH KDYITFNQVNTDYYYNATPGSAQRDVKTSLLVFDQVLKLADMHATASPEDFAAAYHKAAL HHHEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH KMQKGLGDPGFGPVASLDTERAEVNRRDLLPPSGVGGPADA HHHHCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA