Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89056060

Identifier: 89056060

GI number: 89056060

Start: 3634107

End: 3634496

Strand: Direct

Name: 89056060

Synonym: Jann_3569

Alternate gene names: NA

Gene position: 3634107-3634496 (Clockwise)

Preceding gene: 89056058

Following gene: 89056061

Centisome position: 84.16

GC content: 55.38

Gene sequence:

>390_bases
ATGACCATGTCCGCAGACGCCTTCCCACCCCTTGAAATGAACGCGAATCCCGTGGCCAACGCACCGTGTTTGATCATCCA
TTCCAGTGCGCTGGTGGCTGAGGATTTAAGAGATATTCTGGAGTCCGAAGGCGCGCTGGAAGTGCTGACAGCGCCCGATA
TTACGCAAGCGCCCATCGCGCCCGCTCGCGTCGTTCTTGTGTCGGGTTCGCTCGAAAAGATCCTGGATACGCCTCAGGCG
ATGTATTGGCGGCAACATGCCATCCCGGTCATTCTGGTGGACAGCGAGCTTCAGCACGTCCGCGCGACCGAGGCCGGATT
TCACACGTTGAACGAGCCGTTTCGCACAGAAGATGTCATTCATCTTCTAAACAAGTTCAATATTTTCTGA

Upstream 100 bases:

>100_bases
TCCTCAGCGGGCAATTTACGCAATCAGTAACCATGGCTCTTTTCGTTGCTGCTATGTCCTAGTTTAATGCAAGACATTTG
AAATAGTTCCATATGGTCTG

Downstream 100 bases:

>100_bases
CCTTTCCGGGAACTGATCGACGTTGACCCGTGTTGTCCCCCTGACCGTGAATTAAGGAGACACACCATGTTACGTTGGGC
CGTCACATTTTTGATCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTMSADAFPPLEMNANPVANAPCLIIHSSALVAEDLRDILESEGALEVLTAPDITQAPIAPARVVLVSGSLEKILDTPQA
MYWRQHAIPVILVDSELQHVRATEAGFHTLNEPFRTEDVIHLLNKFNIF

Sequences:

>Translated_129_residues
MTMSADAFPPLEMNANPVANAPCLIIHSSALVAEDLRDILESEGALEVLTAPDITQAPIAPARVVLVSGSLEKILDTPQA
MYWRQHAIPVILVDSELQHVRATEAGFHTLNEPFRTEDVIHLLNKFNIF
>Mature_128_residues
TMSADAFPPLEMNANPVANAPCLIIHSSALVAEDLRDILESEGALEVLTAPDITQAPIAPARVVLVSGSLEKILDTPQAM
YWRQHAIPVILVDSELQHVRATEAGFHTLNEPFRTEDVIHLLNKFNIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14165; Mature: 14034

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSADAFPPLEMNANPVANAPCLIIHSSALVAEDLRDILESEGALEVLTAPDITQAPIA
CCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PARVVLVSGSLEKILDTPQAMYWRQHAIPVILVDSELQHVRATEAGFHTLNEPFRTEDVI
CEEEEEECCCHHHHHCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHH
HLLNKFNIF
HHHHHHCCC
>Mature Secondary Structure 
TMSADAFPPLEMNANPVANAPCLIIHSSALVAEDLRDILESEGALEVLTAPDITQAPIA
CCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PARVVLVSGSLEKILDTPQAMYWRQHAIPVILVDSELQHVRATEAGFHTLNEPFRTEDVI
CEEEEEECCCHHHHHCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHH
HLLNKFNIF
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA