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The map label for this gene is yurM [H]

Identifier: 89056046

GI number: 89056046

Start: 3618719

End: 3619558

Strand: Direct

Name: yurM [H]

Synonym: Jann_3555

Alternate gene names: 89056046

Gene position: 3618719-3619558 (Clockwise)

Preceding gene: 89056045

Following gene: 89056047

Centisome position: 83.81

GC content: 58.21

Gene sequence:

>840_bases
ATGTCTGTCACCCGCCCAAACCCCGCTTTGACCATCGGCAAATACGCGGCCCTGCTGGCGTACCTGCTGTTCGCGCTGTT
CCCGCTTTACTGGCTGGTGAAAATCGCGATCACGCCGGATCGTCTGATCTTCACGGAGGGAACGCAACTTTGGCCTTCCT
CCGTGACGCTCGACAATTTCCGCACGGTGATCTTCCAGACCGACTTCATCTCGTTCTTTGGCAATTCGCTTTACGTGTCA
TTGGGGACGGCAGCTGTCACCACGATCCTGGCTGCGGGCGCGGGTTATGCGTTCTCGCGCTTCGACTTCGGGGGCAAGAA
ACTCATCGTTGCCATCATGCTAATCACCCAGATGTTCCCGCTTCTGATGATCATCGCGCCGATCTACAAGATTGTAGCCT
CGCTTGGGATGCTGAATTCGCTGACCTCGCTGATCGTGGTCTACACCGCCTTCAACATCCCCTTCGCGACCTTCCTGATG
CAAAGCTTTTTTGACGCGATCCCCAAGGATCTGGAAGAGGCCGCGATGATGGACGGCTGCACCCGGTTTCAGGCATTGCG
CAAGGTGATCCTGCCGCTGACGCTGCCGGGTCTCGGCGCCACGCTAGGCTTTGTCTTCACCGCCGCATGGTCCGAGTTGT
TGTTCGCGCTGATGCTGATCTCGGACAACGATTCCATGACATTCCCCGTGGGCTTGCTGACCTTCGTGTCGCGCTTCTCG
GTCGATTGGGGGCAGATGATGGCGGCGGGATCGCTGGCCCTGATCCCAAGCTGCCTCTTTTTCATCTTCATTCAACGCTA
CCTCGTGCAGGGCCTCACGTCCGGCGCGGTCAAGGGATAG

Upstream 100 bases:

>100_bases
GTTCGCATCGACCATCGCGGTGGCTCTCCTGATCATCCTTCTGGCCTATGCGATCTTGGTGCTGTGGCTGCGCAAGAAAC
TGGTGAAGGTGTAAACGGCC

Downstream 100 bases:

>100_bases
GGAGCCACTCGATGGCAAGTATGGAACTCAAGGATGTGGTCAAACGCTACGGCGCGGTGGAGGTCCTGCGCGATATCAAT
CTGGATATTGCGGATGGTGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MSVTRPNPALTIGKYAALLAYLLFALFPLYWLVKIAITPDRLIFTEGTQLWPSSVTLDNFRTVIFQTDFISFFGNSLYVS
LGTAAVTTILAAGAGYAFSRFDFGGKKLIVAIMLITQMFPLLMIIAPIYKIVASLGMLNSLTSLIVVYTAFNIPFATFLM
QSFFDAIPKDLEEAAMMDGCTRFQALRKVILPLTLPGLGATLGFVFTAAWSELLFALMLISDNDSMTFPVGLLTFVSRFS
VDWGQMMAAGSLALIPSCLFFIFIQRYLVQGLTSGAVKG

Sequences:

>Translated_279_residues
MSVTRPNPALTIGKYAALLAYLLFALFPLYWLVKIAITPDRLIFTEGTQLWPSSVTLDNFRTVIFQTDFISFFGNSLYVS
LGTAAVTTILAAGAGYAFSRFDFGGKKLIVAIMLITQMFPLLMIIAPIYKIVASLGMLNSLTSLIVVYTAFNIPFATFLM
QSFFDAIPKDLEEAAMMDGCTRFQALRKVILPLTLPGLGATLGFVFTAAWSELLFALMLISDNDSMTFPVGLLTFVSRFS
VDWGQMMAAGSLALIPSCLFFIFIQRYLVQGLTSGAVKG
>Mature_278_residues
SVTRPNPALTIGKYAALLAYLLFALFPLYWLVKIAITPDRLIFTEGTQLWPSSVTLDNFRTVIFQTDFISFFGNSLYVSL
GTAAVTTILAAGAGYAFSRFDFGGKKLIVAIMLITQMFPLLMIIAPIYKIVASLGMLNSLTSLIVVYTAFNIPFATFLMQ
SFFDAIPKDLEEAAMMDGCTRFQALRKVILPLTLPGLGATLGFVFTAAWSELLFALMLISDNDSMTFPVGLLTFVSRFSV
DWGQMMAAGSLALIPSCLFFIFIQRYLVQGLTSGAVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=272, Percent_Identity=33.4558823529412, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1790464, Length=273, Percent_Identity=31.8681318681319, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1789860, Length=286, Percent_Identity=26.2237762237762, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30576; Mature: 30445

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SVTRPNPALTIGKYAALLAYLLFALFPLYWLVKIAITPDRLIFTEGTQLWPSSVTLDNF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHH
RTVIFQTDFISFFGNSLYVSLGTAAVTTILAAGAGYAFSRFDFGGKKLIVAIMLITQMFP
HHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHH
LLMIIAPIYKIVASLGMLNSLTSLIVVYTAFNIPFATFLMQSFFDAIPKDLEEAAMMDGC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRFQALRKVILPLTLPGLGATLGFVFTAAWSELLFALMLISDNDSMTFPVGLLTFVSRFS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
VDWGQMMAAGSLALIPSCLFFIFIQRYLVQGLTSGAVKG
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]