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The map label for this gene is ugpB [C]

Identifier: 89056044

GI number: 89056044

Start: 3616521

End: 3617780

Strand: Direct

Name: ugpB [C]

Synonym: Jann_3553

Alternate gene names: 89056044

Gene position: 3616521-3617780 (Clockwise)

Preceding gene: 89056043

Following gene: 89056045

Centisome position: 83.75

GC content: 62.46

Gene sequence:

>1260_bases
ATGAAACGTATTCTTATCAGTGCCAGCACCATCGCCATGATGGTCGCCGGCGCGGCGCAAGCCGACACGACATTGAGGTT
GGTTGAAGTGATCACCAGCCCCGAGCGGACGGCCGTTCTGGAACAGATCGTGGCCGATTTTGAAGCCGCCAATGAGGGTG
TGACGGTCGAGATTACCAGCCTGCCCTGGGGCCAGGCGTTTGAGACGCTGGCGACCATGGTCGCGGGCGGCGACATCCCC
GATGTGGTGGAGATGCCCGATACTTGGGCCGCGCTTTATGCGGGCTCGGATCGTCTGGTGGACCTGTCCGACCATGTGGC
CGGTTGGGAAGATGGCGCGACACTGACCCAGCGGACCGTGGACATGGGTAGCCAATCAGGCGCCTTCAACATGATCCCTT
ACGGCTTCTACCTGCGGGCGATGTTCTACAACCGGGCCCTGCTGGAAGAGGCGGGCGTGGCCGAGCCGCCGCGCACGATG
GCGGACTTCGCGGCTGCCGCCGCAGCTGTGTCCGAATTGGACGGTCGGTCCGGCTACTGCCTGCGCGGCGGGCCGGGTGG
CACCAACGGCTGGATCATGATGGCAGCCGCGATGAACGGCACCAACGAGTTCTTCACCGAAGATGGCCAGTCGCGGATCA
ACGAGCCGGGCTCTGTCGAAGGGATCCAGTTCCTGCTGGACATGTATCAGAACGGGAATGCGCCGCGTGACAGCGTGAAC
TGGGGCTTTAACGAGATCGTGGCGGGCTTCTATTCCGGCCAATGCGCGTTCCTTGACCAGGACCCCGACGCGCTGATCGC
GATTGCCGAGCGGATGGATGCGGACGACTTCGCCGTGATCCCGATGCCCGTCGGCCCATCGGGTGAGGCATTCCCGACCA
TCGGATTTGCGGGTTGGTCGATCTTCAACACGACCGAGCACGAGGAAGAGGCCTTTGATCTGGTCGCGGCCCTGTCGTCG
CCCGAGGCAAATTCCACCTGGGCGCAGCGGGTTGGCGTGATCCCGATCCACCAGGGTGCTGATCAGGACCCTTATTTCCA
GACCGACCAATTCGCGGGCTGGTTTGAGACCCTGAATGGCGAGGAATATGTGCCCACGATCATGCCCACCTACCTTGAGG
AATGGGGCTATTTCGCCAGCACAATCGTGGTTGAAACCAGCCAGGAAGCGCTTCTGGGACAGATCACCGCGCAGGAATTG
GCCGACCAATGGGCCGAGTACCTGAACGAGGCGCAAGCCAACTGGCAGGCCGCCCAGTGA

Upstream 100 bases:

>100_bases
CAGAAGACCTTTGGGCAGATTTTGAATCTGCCCTGAGTGCAAGTCTGACCTGACAAACCGGGTCCGCATACGACAACACA
GGAAGAGAAGGGAGTTGCTT

Downstream 100 bases:

>100_bases
CCGCGCATCCTCAAACCAACGTCATGCCCGGGGGATCCCGGGCACGACGCTCGCTTTATTGGCGATACATGGTGGAGCCG
TTCCTTTACCTGTCGCCCGC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MKRILISASTIAMMVAGAAQADTTLRLVEVITSPERTAVLEQIVADFEAANEGVTVEITSLPWGQAFETLATMVAGGDIP
DVVEMPDTWAALYAGSDRLVDLSDHVAGWEDGATLTQRTVDMGSQSGAFNMIPYGFYLRAMFYNRALLEEAGVAEPPRTM
ADFAAAAAAVSELDGRSGYCLRGGPGGTNGWIMMAAAMNGTNEFFTEDGQSRINEPGSVEGIQFLLDMYQNGNAPRDSVN
WGFNEIVAGFYSGQCAFLDQDPDALIAIAERMDADDFAVIPMPVGPSGEAFPTIGFAGWSIFNTTEHEEEAFDLVAALSS
PEANSTWAQRVGVIPIHQGADQDPYFQTDQFAGWFETLNGEEYVPTIMPTYLEEWGYFASTIVVETSQEALLGQITAQEL
ADQWAEYLNEAQANWQAAQ

Sequences:

>Translated_419_residues
MKRILISASTIAMMVAGAAQADTTLRLVEVITSPERTAVLEQIVADFEAANEGVTVEITSLPWGQAFETLATMVAGGDIP
DVVEMPDTWAALYAGSDRLVDLSDHVAGWEDGATLTQRTVDMGSQSGAFNMIPYGFYLRAMFYNRALLEEAGVAEPPRTM
ADFAAAAAAVSELDGRSGYCLRGGPGGTNGWIMMAAAMNGTNEFFTEDGQSRINEPGSVEGIQFLLDMYQNGNAPRDSVN
WGFNEIVAGFYSGQCAFLDQDPDALIAIAERMDADDFAVIPMPVGPSGEAFPTIGFAGWSIFNTTEHEEEAFDLVAALSS
PEANSTWAQRVGVIPIHQGADQDPYFQTDQFAGWFETLNGEEYVPTIMPTYLEEWGYFASTIVVETSQEALLGQITAQEL
ADQWAEYLNEAQANWQAAQ
>Mature_419_residues
MKRILISASTIAMMVAGAAQADTTLRLVEVITSPERTAVLEQIVADFEAANEGVTVEITSLPWGQAFETLATMVAGGDIP
DVVEMPDTWAALYAGSDRLVDLSDHVAGWEDGATLTQRTVDMGSQSGAFNMIPYGFYLRAMFYNRALLEEAGVAEPPRTM
ADFAAAAAAVSELDGRSGYCLRGGPGGTNGWIMMAAAMNGTNEFFTEDGQSRINEPGSVEGIQFLLDMYQNGNAPRDSVN
WGFNEIVAGFYSGQCAFLDQDPDALIAIAERMDADDFAVIPMPVGPSGEAFPTIGFAGWSIFNTTEHEEEAFDLVAALSS
PEANSTWAQRVGVIPIHQGADQDPYFQTDQFAGWFETLNGEEYVPTIMPTYLEEWGYFASTIVVETSQEALLGQITAQEL
ADQWAEYLNEAQANWQAAQ

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45332; Mature: 45332

Theoretical pI: Translated: 3.65; Mature: 3.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILISASTIAMMVAGAAQADTTLRLVEVITSPERTAVLEQIVADFEAANEGVTVEITS
CCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
LPWGQAFETLATMVAGGDIPDVVEMPDTWAALYAGSDRLVDLSDHVAGWEDGATLTQRTV
CCCHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCEEECHHHCCCCCCCCHHHHHHH
DMGSQSGAFNMIPYGFYLRAMFYNRALLEEAGVAEPPRTMADFAAAAAAVSELDGRSGYC
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
LRGGPGGTNGWIMMAAAMNGTNEFFTEDGQSRINEPGSVEGIQFLLDMYQNGNAPRDSVN
EECCCCCCCCEEEEEEECCCCHHHHCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCC
WGFNEIVAGFYSGQCAFLDQDPDALIAIAERMDADDFAVIPMPVGPSGEAFPTIGFAGWS
CCHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEECCCE
IFNTTEHEEEAFDLVAALSSPEANSTWAQRVGVIPIHQGADQDPYFQTDQFAGWFETLNG
EECCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHCCC
EEYVPTIMPTYLEEWGYFASTIVVETSQEALLGQITAQELADQWAEYLNEAQANWQAAQ
CCCCCHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKRILISASTIAMMVAGAAQADTTLRLVEVITSPERTAVLEQIVADFEAANEGVTVEITS
CCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
LPWGQAFETLATMVAGGDIPDVVEMPDTWAALYAGSDRLVDLSDHVAGWEDGATLTQRTV
CCCHHHHHHHHHHHHCCCCCHHHCCCCCCEEEECCCCCEEECHHHCCCCCCCCHHHHHHH
DMGSQSGAFNMIPYGFYLRAMFYNRALLEEAGVAEPPRTMADFAAAAAAVSELDGRSGYC
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
LRGGPGGTNGWIMMAAAMNGTNEFFTEDGQSRINEPGSVEGIQFLLDMYQNGNAPRDSVN
EECCCCCCCCEEEEEEECCCCHHHHCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCC
WGFNEIVAGFYSGQCAFLDQDPDALIAIAERMDADDFAVIPMPVGPSGEAFPTIGFAGWS
CCHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEECCCE
IFNTTEHEEEAFDLVAALSSPEANSTWAQRVGVIPIHQGADQDPYFQTDQFAGWFETLNG
EECCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHCCC
EEYVPTIMPTYLEEWGYFASTIVVETSQEALLGQITAQELADQWAEYLNEAQANWQAAQ
CCCCCHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA