| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is sam [H]
Identifier: 89055956
GI number: 89055956
Start: 3515792
End: 3516709
Strand: Direct
Name: sam [H]
Synonym: Jann_3465
Alternate gene names: 89055956
Gene position: 3515792-3516709 (Clockwise)
Preceding gene: 89055955
Following gene: 89055958
Centisome position: 81.42
GC content: 66.34
Gene sequence:
>918_bases ATGGGCAATCCTTCTGACACAACTGACCGGCCACTTCTGGGCATCGCCTTGATGCTGGGGTTTTGCGTCGTGATCCCGTT CTCGGACGCGCTGGCCAAGCTGCTGGGGGCGGACTTCCCGCTGTTGCAGCTGGTGGTTGTGCGCTTTGCGACGCAGACGA TCCTGTTCGTCCCCATGGCGATGGCGGCGGGTGCGATCTTGTTCCCATCCGGGCGGGTGATCGGGCTGACGCTTCTGCGG GCGGGACTTCAAATCGCGGGTCTGCTGCTGATGTTCTCGGCCCTGCGGGTCCTGCCCCTGGCCGACGCGGTGGCCATCGC CTTCGTCATGCCTTTCCTGATGCTGCTTCTGGGCCGCCTGTTCCTGAACGAGGAGGTCGGCCCCCGTCGCCTGATCGCCT GTGCCGTGGGCTTCATCGGCACGCTGATGGTCGTGCAACCCAGCTTTGCCGCCGTGGGGTGGGCTGCCCTGCTGCCGGTG GGCGTCGCCTTTGCCTTCGCCTTCTTCATGCTGGTGACCCGTGCCATGTCGCGGGAGATTGACCCGCTGGCGCTGCAGGG GGCGTCTGGCCTTGTGGCGCTGCCGCTGGTCGTGCCGTTCCTGTTCTTTCCCGTCGCGGATACGGACCCGCTGGCCGGGT GGGTCACGCCGATGGGCGCGCAGATCTGGCTGTTCGTGGCCCTGGGCATTTTCGGCTCCGTCGGGCACCTGCTGATGACC TGGTCGCTCCGCTATGCGCCCTCGGCCACGCTGGCACCGATGCAATATCTGGAGATCCCGGTGGCCACGCTTGTGGGCTT CCTGATGTTCAGTGATCTGCCCAACGGGCTGGCGGCTGCGGGCATCGCGGTCACCATCGCCTCGGGCCTTTACATCGTGT TCCGGGAGCGGGCGCTGAGCCGGGGTGCTCAAGGTTGA
Upstream 100 bases:
>100_bases TCACGGGGTTGATCCGGCGGGCCCTAACGGGGCTGTTGCCCGGCAGGGACGGCTGACAATTTCCCGCTGACACCGGCCCG CGGGCGTGCCATGCAGCCCC
Downstream 100 bases:
>100_bases GCACCCACCTTAACCTACTGGTACTAAACAATCTTCCTATTTTCTTAACCTTTTGTTAACCCCTCCAAAACGCCCCTGTC GCGCCGCCCGCGGGGGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MGNPSDTTDRPLLGIALMLGFCVVIPFSDALAKLLGADFPLLQLVVVRFATQTILFVPMAMAAGAILFPSGRVIGLTLLR AGLQIAGLLLMFSALRVLPLADAVAIAFVMPFLMLLLGRLFLNEEVGPRRLIACAVGFIGTLMVVQPSFAAVGWAALLPV GVAFAFAFFMLVTRAMSREIDPLALQGASGLVALPLVVPFLFFPVADTDPLAGWVTPMGAQIWLFVALGIFGSVGHLLMT WSLRYAPSATLAPMQYLEIPVATLVGFLMFSDLPNGLAAAGIAVTIASGLYIVFRERALSRGAQG
Sequences:
>Translated_305_residues MGNPSDTTDRPLLGIALMLGFCVVIPFSDALAKLLGADFPLLQLVVVRFATQTILFVPMAMAAGAILFPSGRVIGLTLLR AGLQIAGLLLMFSALRVLPLADAVAIAFVMPFLMLLLGRLFLNEEVGPRRLIACAVGFIGTLMVVQPSFAAVGWAALLPV GVAFAFAFFMLVTRAMSREIDPLALQGASGLVALPLVVPFLFFPVADTDPLAGWVTPMGAQIWLFVALGIFGSVGHLLMT WSLRYAPSATLAPMQYLEIPVATLVGFLMFSDLPNGLAAAGIAVTIASGLYIVFRERALSRGAQG >Mature_304_residues GNPSDTTDRPLLGIALMLGFCVVIPFSDALAKLLGADFPLLQLVVVRFATQTILFVPMAMAAGAILFPSGRVIGLTLLRA GLQIAGLLLMFSALRVLPLADAVAIAFVMPFLMLLLGRLFLNEEVGPRRLIACAVGFIGTLMVVQPSFAAVGWAALLPVG VAFAFAFFMLVTRAMSREIDPLALQGASGLVALPLVVPFLFFPVADTDPLAGWVTPMGAQIWLFVALGIFGSVGHLLMTW SLRYAPSATLAPMQYLEIPVATLVGFLMFSDLPNGLAAAGIAVTIASGLYIVFRERALSRGAQG
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32222; Mature: 32091
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNPSDTTDRPLLGIALMLGFCVVIPFSDALAKLLGADFPLLQLVVVRFATQTILFVPMA CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH MAAGAILFPSGRVIGLTLLRAGLQIAGLLLMFSALRVLPLADAVAIAFVMPFLMLLLGRL HHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLNEEVGPRRLIACAVGFIGTLMVVQPSFAAVGWAALLPVGVAFAFAFFMLVTRAMSREI HHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPLALQGASGLVALPLVVPFLFFPVADTDPLAGWVTPMGAQIWLFVALGIFGSVGHLLMT CCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH WSLRYAPSATLAPMQYLEIPVATLVGFLMFSDLPNGLAAAGIAVTIASGLYIVFRERALS HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RGAQG CCCCC >Mature Secondary Structure GNPSDTTDRPLLGIALMLGFCVVIPFSDALAKLLGADFPLLQLVVVRFATQTILFVPMA CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH MAAGAILFPSGRVIGLTLLRAGLQIAGLLLMFSALRVLPLADAVAIAFVMPFLMLLLGRL HHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLNEEVGPRRLIACAVGFIGTLMVVQPSFAAVGWAALLPVGVAFAFAFFMLVTRAMSREI HHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPLALQGASGLVALPLVVPFLFFPVADTDPLAGWVTPMGAQIWLFVALGIFGSVGHLLMT CCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH WSLRYAPSATLAPMQYLEIPVATLVGFLMFSDLPNGLAAAGIAVTIASGLYIVFRERALS HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RGAQG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA