| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055881
Identifier: 89055881
GI number: 89055881
Start: 3442376
End: 3443389
Strand: Direct
Name: 89055881
Synonym: Jann_3390
Alternate gene names: NA
Gene position: 3442376-3443389 (Clockwise)
Preceding gene: 89055880
Following gene: 89055882
Centisome position: 79.72
GC content: 63.61
Gene sequence:
>1014_bases ATGCGACCCAAACTGCGCTTTGCCACCTACAATGTGGAATGGTTCTTCAAACTGTTCGATGATGAGGGGCGGCTGTTGCG TGATGACGGTTGGTCGGGCCGCTGGAATGTGACTCGGACCGCACAGATCGACGCCCTGGCCCGCGTGTTCCGGGCCATGG ACGCTGATGCCGTATTGGTGGTGGAAGCCCCGGACACCAGCCGGGGCCGCGACGGGGCGGTCGCGTTGCGCAGTTTTGCG GCACATGCCGGTCTGCGCGCCCGCGAGGTATTGGCAGGCTTCCCGAATGAGACGCAGCAGGAACTGATGTTGCTGTATGA CCCGGACGTGATCACGGCGCGCCACGATCCGCTGGAGGCCGGTGCCCCGCAATTTGACGCGGAATTCGCGATTGATCTGG ATATCGACGCGACCGAGGATCTCGTGCGCTTCTCCAAACCGCCGCTGGAGGCGGCGTTGGAGACACCTGTCGGGCCGCTG CGCCTGATCGGGGCCCATGTAAAATCGAAGGCACCCCATGGGGCTGTGACCGATGCGGATGTGATGCGCATCGCCATTGC CAACCGCCGCAAGCAGTTGGCGCAATGCATATGGCTGCGCCGGAGGGTGGAGGCGCATCTGGACGCCGGCGATGCGCTGA TCGTGGCGGGTGATCTGAATGATGGCCCCGGATTGGATGAGTATGAGGCCCTATTCGGGCGCTCCGGCCTGGAGATTATC CTGGGGACCGCGGGGGTGGCCGAACGGCGGCTTTTTGATCCCCACGCGGCGCAGGCGCTGCAATCAAAGTTGTCCGCCAC ACCCACCACGGCGCGGTTTTTCAAGCGACACGAGAACCGGTATCTGCAAGCCCTGCTCGACTACGTCATGGTGTCGCCTG CCCTGCGCCTTCGCGCGGACCGCTGGCACATCTGGCACCCCTTCGATGACCCCGATTGCTGGGGTCAAACCGACCTGCGA GAGGCGCTTTTGACGGCGTCCGATCACTTCCCCGTCAGCCTGGACTTGATCTGA
Upstream 100 bases:
>100_bases CGGCGTGCCGGAAGAGGCCATCAAGATCGCCGAGCAGCGGATGCAGGCGATCAACCGCGCCTGGGAGGAGATCCAGAACC GTCGCCGGGAACCCGCCTGA
Downstream 100 bases:
>100_bases ACGCCTGCCCGCCCCCATCTTAGACCCATGAAACATGCACTTTCCGTAGGACTTGTGGTTGGCGCGCTAGCGATTGCGGC GCCCGCAGCCGCGCAAGACG
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MRPKLRFATYNVEWFFKLFDDEGRLLRDDGWSGRWNVTRTAQIDALARVFRAMDADAVLVVEAPDTSRGRDGAVALRSFA AHAGLRAREVLAGFPNETQQELMLLYDPDVITARHDPLEAGAPQFDAEFAIDLDIDATEDLVRFSKPPLEAALETPVGPL RLIGAHVKSKAPHGAVTDADVMRIAIANRRKQLAQCIWLRRRVEAHLDAGDALIVAGDLNDGPGLDEYEALFGRSGLEII LGTAGVAERRLFDPHAAQALQSKLSATPTTARFFKRHENRYLQALLDYVMVSPALRLRADRWHIWHPFDDPDCWGQTDLR EALLTASDHFPVSLDLI
Sequences:
>Translated_337_residues MRPKLRFATYNVEWFFKLFDDEGRLLRDDGWSGRWNVTRTAQIDALARVFRAMDADAVLVVEAPDTSRGRDGAVALRSFA AHAGLRAREVLAGFPNETQQELMLLYDPDVITARHDPLEAGAPQFDAEFAIDLDIDATEDLVRFSKPPLEAALETPVGPL RLIGAHVKSKAPHGAVTDADVMRIAIANRRKQLAQCIWLRRRVEAHLDAGDALIVAGDLNDGPGLDEYEALFGRSGLEII LGTAGVAERRLFDPHAAQALQSKLSATPTTARFFKRHENRYLQALLDYVMVSPALRLRADRWHIWHPFDDPDCWGQTDLR EALLTASDHFPVSLDLI >Mature_337_residues MRPKLRFATYNVEWFFKLFDDEGRLLRDDGWSGRWNVTRTAQIDALARVFRAMDADAVLVVEAPDTSRGRDGAVALRSFA AHAGLRAREVLAGFPNETQQELMLLYDPDVITARHDPLEAGAPQFDAEFAIDLDIDATEDLVRFSKPPLEAALETPVGPL RLIGAHVKSKAPHGAVTDADVMRIAIANRRKQLAQCIWLRRRVEAHLDAGDALIVAGDLNDGPGLDEYEALFGRSGLEII LGTAGVAERRLFDPHAAQALQSKLSATPTTARFFKRHENRYLQALLDYVMVSPALRLRADRWHIWHPFDDPDCWGQTDLR EALLTASDHFPVSLDLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37635; Mature: 37635
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPKLRFATYNVEWFFKLFDDEGRLLRDDGWSGRWNVTRTAQIDALARVFRAMDADAVLV CCCCEEEEEECCEEEEEEECCCCCEEECCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEE VEAPDTSRGRDGAVALRSFAAHAGLRAREVLAGFPNETQQELMLLYDPDVITARHDPLEA EECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCCC GAPQFDAEFAIDLDIDATEDLVRFSKPPLEAALETPVGPLRLIGAHVKSKAPHGAVTDAD CCCCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHH VMRIAIANRRKQLAQCIWLRRRVEAHLDAGDALIVAGDLNDGPGLDEYEALFGRSGLEII HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCEEE LGTAGVAERRLFDPHAAQALQSKLSATPTTARFFKRHENRYLQALLDYVMVSPALRLRAD EECCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECC RWHIWHPFDDPDCWGQTDLREALLTASDHFPVSLDLI EEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure MRPKLRFATYNVEWFFKLFDDEGRLLRDDGWSGRWNVTRTAQIDALARVFRAMDADAVLV CCCCEEEEEECCEEEEEEECCCCCEEECCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEE VEAPDTSRGRDGAVALRSFAAHAGLRAREVLAGFPNETQQELMLLYDPDVITARHDPLEA EECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCEEECCCCCCCC GAPQFDAEFAIDLDIDATEDLVRFSKPPLEAALETPVGPLRLIGAHVKSKAPHGAVTDAD CCCCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHH VMRIAIANRRKQLAQCIWLRRRVEAHLDAGDALIVAGDLNDGPGLDEYEALFGRSGLEII HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCEEE LGTAGVAERRLFDPHAAQALQSKLSATPTTARFFKRHENRYLQALLDYVMVSPALRLRAD EECCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECC RWHIWHPFDDPDCWGQTDLREALLTASDHFPVSLDLI EEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA