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The map label for this gene is 89055867

Identifier: 89055867

GI number: 89055867

Start: 3429381

End: 3430790

Strand: Direct

Name: 89055867

Synonym: Jann_3376

Alternate gene names: NA

Gene position: 3429381-3430790 (Clockwise)

Preceding gene: 89055866

Following gene: 89055868

Centisome position: 79.42

GC content: 66.24

Gene sequence:

>1410_bases
ATGCCCACCCAGAAGCTCTATGTCGGCGCGAAGCTGCGCTCCATCCGCACGGGCGTGGGTCTGACCCAGAAGGATTTCGC
GGCAAAGCTCGGGATCTCCCTGCCCTACCTCAACCAGATGGAGAACAATAACAGGCCGCTCTCGACCGCCGTTCTGATGG
GTCTGGCGCAGGATTTCGGGGTTGATGTCACGGAATTGTCGGCCTCGGATGCCGACCGCATCGTCTCGGATATGCGGGAG
GCGTTGGCCGATCCGCTGTTTGCCGAAGTCGCCCCGGCCCTTGCAGATCTGCGGCTGGTTGCCTCCAACGCGCCCACCCT
CGCCCGCGCCTTCCTGGAGCTGCACCGCGCCTACCGTCAGACCCATGAACGCCTGGCCTCCCTCGACGAGGCCTTGGGCC
ACCAAAGCAGCGCCGCCCCCTCCCCCTGGGAGGAGGTGCGTGATTTCTTCCACTACACCGACAATTACATCGACGCCGTG
GACCGCGCGGCGGAGCGGTTCGCCACCCGCGCCCAAAAAACCGGAAGTGGCGGCGATCTGGCCGCCCACACCCGGGCCGT
GCTGTCGGACATGGGCGTCACGATCCGGCATGCCTCCGGCGACGGCGTGCGCAGTTATGCGCCGGACACACGGGTCCTCA
CCCTCTCCCCCCAGGCCGCGCCGGAAACGCAGCGGTTTCAACTGCTGCACCAATACGCGCTGTTGGGTCAGGAAAAACTG
ATCGAGGCGACGTTGGATCTGGCCCGGTTTCAATCCGACACGGCCCGGGAAATCGCCCGGATCGGCATGGCCAACTACTT
CGCGGGCGCCGTCCTGATGCCCTATGCCCGCTTTGCCGAGGCCGCCGTTGAGACCCGCCATGATCTGGAGCGTCTGGCAA
TCACCTTTGGCGCTTCGATTGAACAGATCGCCCATCGTCTGTCGACCCTGCAACGTCCCGGGGCCAAGGGGATCCCGTTC
TTTTTCGCGCGCGTGGATCAGGCGGGCACCGTCACCAAACGCCACTCGGCCACGCGGTTGCAATTTGCCCGCTTCGGCGG
CGCGTGCCCGCTCTGGAACGTGCATCAGGCCTTCGAGACACCGGGTCATTTCCTGCGGCAACTGGCCGAGACGCCGGACG
GGGCGCGCTACGTGATCCTGGCGCGCGACGTGTCGAAATCCGGCGGGGCCTGGGGTCGTCCGACCCGGCGCTACGCGGTG
TCGCTGGGGTGCGAGGTGCGCCACGCGGCCTCTCTCGTTTACGCCGACGGTCTGGATCTGGAGCGGGACACGGCGTTTCA
GCCCATCGGCATTTCCTGCCGGATCTGCGAACGCCCCAATTGCCATCAGCGCGCCGTCCCGCCGCTGGAGCGTCAACTGG
TCGTCGACCCGAACCGACGCGGCACCCTGCCCTATGAGGTTGCGCAATAG

Upstream 100 bases:

>100_bases
GGTTTTCGCATCGCGAAAATCGGGGCCAGCGTCTCCCCCGGCCCTTGCCTCCCCATTTGCAAATCCGCTAATCGAACCTT
GCAAAGCCAGGAGCCCCGTC

Downstream 100 bases:

>100_bases
CCTTGCCAATCCGGTGACGGCCCTTAAGCTGACCCAAAAGGGGGAGGGATATCATGGAACTACATGCCAGCCGACACATT
GCGGCGGACCGGGCAGAGGT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MPTQKLYVGAKLRSIRTGVGLTQKDFAAKLGISLPYLNQMENNNRPLSTAVLMGLAQDFGVDVTELSASDADRIVSDMRE
ALADPLFAEVAPALADLRLVASNAPTLARAFLELHRAYRQTHERLASLDEALGHQSSAAPSPWEEVRDFFHYTDNYIDAV
DRAAERFATRAQKTGSGGDLAAHTRAVLSDMGVTIRHASGDGVRSYAPDTRVLTLSPQAAPETQRFQLLHQYALLGQEKL
IEATLDLARFQSDTAREIARIGMANYFAGAVLMPYARFAEAAVETRHDLERLAITFGASIEQIAHRLSTLQRPGAKGIPF
FFARVDQAGTVTKRHSATRLQFARFGGACPLWNVHQAFETPGHFLRQLAETPDGARYVILARDVSKSGGAWGRPTRRYAV
SLGCEVRHAASLVYADGLDLERDTAFQPIGISCRICERPNCHQRAVPPLERQLVVDPNRRGTLPYEVAQ

Sequences:

>Translated_469_residues
MPTQKLYVGAKLRSIRTGVGLTQKDFAAKLGISLPYLNQMENNNRPLSTAVLMGLAQDFGVDVTELSASDADRIVSDMRE
ALADPLFAEVAPALADLRLVASNAPTLARAFLELHRAYRQTHERLASLDEALGHQSSAAPSPWEEVRDFFHYTDNYIDAV
DRAAERFATRAQKTGSGGDLAAHTRAVLSDMGVTIRHASGDGVRSYAPDTRVLTLSPQAAPETQRFQLLHQYALLGQEKL
IEATLDLARFQSDTAREIARIGMANYFAGAVLMPYARFAEAAVETRHDLERLAITFGASIEQIAHRLSTLQRPGAKGIPF
FFARVDQAGTVTKRHSATRLQFARFGGACPLWNVHQAFETPGHFLRQLAETPDGARYVILARDVSKSGGAWGRPTRRYAV
SLGCEVRHAASLVYADGLDLERDTAFQPIGISCRICERPNCHQRAVPPLERQLVVDPNRRGTLPYEVAQ
>Mature_468_residues
PTQKLYVGAKLRSIRTGVGLTQKDFAAKLGISLPYLNQMENNNRPLSTAVLMGLAQDFGVDVTELSASDADRIVSDMREA
LADPLFAEVAPALADLRLVASNAPTLARAFLELHRAYRQTHERLASLDEALGHQSSAAPSPWEEVRDFFHYTDNYIDAVD
RAAERFATRAQKTGSGGDLAAHTRAVLSDMGVTIRHASGDGVRSYAPDTRVLTLSPQAAPETQRFQLLHQYALLGQEKLI
EATLDLARFQSDTAREIARIGMANYFAGAVLMPYARFAEAAVETRHDLERLAITFGASIEQIAHRLSTLQRPGAKGIPFF
FARVDQAGTVTKRHSATRLQFARFGGACPLWNVHQAFETPGHFLRQLAETPDGARYVILARDVSKSGGAWGRPTRRYAVS
LGCEVRHAASLVYADGLDLERDTAFQPIGISCRICERPNCHQRAVPPLERQLVVDPNRRGTLPYEVAQ

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 51602; Mature: 51471

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTQKLYVGAKLRSIRTGVGLTQKDFAAKLGISLPYLNQMENNNRPLSTAVLMGLAQDFG
CCCCEEEECHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHC
VDVTELSASDADRIVSDMREALADPLFAEVAPALADLRLVASNAPTLARAFLELHRAYRQ
CCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
THERLASLDEALGHQSSAAPSPWEEVRDFFHYTDNYIDAVDRAAERFATRAQKTGSGGDL
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AAHTRAVLSDMGVTIRHASGDGVRSYAPDTRVLTLSPQAAPETQRFQLLHQYALLGQEKL
HHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
IEATLDLARFQSDTAREIARIGMANYFAGAVLMPYARFAEAAVETRHDLERLAITFGASI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EQIAHRLSTLQRPGAKGIPFFFARVDQAGTVTKRHSATRLQFARFGGACPLWNVHQAFET
HHHHHHHHHHHCCCCCCCCHHHEECCCCCCCHHHCHHHHHHHHHHCCCCCCCHHHHHHCC
PGHFLRQLAETPDGARYVILARDVSKSGGAWGRPTRRYAVSLGCEVRHAASLVYADGLDL
HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHEECCCCHHHHHHHHEECCCCC
ERDTAFQPIGISCRICERPNCHQRAVPPLERQLVVDPNRRGTLPYEVAQ
CCCCCCCCCCCEEEECCCCCCCCCCCCCHHCEEEECCCCCCCCCHHCCC
>Mature Secondary Structure 
PTQKLYVGAKLRSIRTGVGLTQKDFAAKLGISLPYLNQMENNNRPLSTAVLMGLAQDFG
CCCEEEECHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHC
VDVTELSASDADRIVSDMREALADPLFAEVAPALADLRLVASNAPTLARAFLELHRAYRQ
CCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
THERLASLDEALGHQSSAAPSPWEEVRDFFHYTDNYIDAVDRAAERFATRAQKTGSGGDL
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AAHTRAVLSDMGVTIRHASGDGVRSYAPDTRVLTLSPQAAPETQRFQLLHQYALLGQEKL
HHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
IEATLDLARFQSDTAREIARIGMANYFAGAVLMPYARFAEAAVETRHDLERLAITFGASI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EQIAHRLSTLQRPGAKGIPFFFARVDQAGTVTKRHSATRLQFARFGGACPLWNVHQAFET
HHHHHHHHHHHCCCCCCCCHHHEECCCCCCCHHHCHHHHHHHHHHCCCCCCCHHHHHHCC
PGHFLRQLAETPDGARYVILARDVSKSGGAWGRPTRRYAVSLGCEVRHAASLVYADGLDL
HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHEECCCCHHHHHHHHEECCCCC
ERDTAFQPIGISCRICERPNCHQRAVPPLERQLVVDPNRRGTLPYEVAQ
CCCCCCCCCCCEEEECCCCCCCCCCCCCHHCEEEECCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]