| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055808
Identifier: 89055808
GI number: 89055808
Start: 3371795
End: 3372298
Strand: Direct
Name: 89055808
Synonym: Jann_3317
Alternate gene names: NA
Gene position: 3371795-3372298 (Clockwise)
Preceding gene: 89055805
Following gene: 89055809
Centisome position: 78.09
GC content: 59.52
Gene sequence:
>504_bases ATGTCACGATCAGACGACGTATGCGACGGCGATGCGATGGCAGCCTACCAGAGCTTCCTCGACCAGTCCGACGCCGCGTT GGAGCATGATGATTTTGACACGTTCATCTCCCGCATTCTGTTGCCGCAACTTATTATACAGGGTTCTGAACGGCTTATCG TCACGTCGACCGATGAAATTCGGCACGTGTTCCACGCCACCCGGCATATGCTGGCGACCCGCAATATCCGGCGGCGGACG CGCCTGTGTACGAATGCCCGTCTGACCGGGGATGGCACGTTGATCGGACACCACACCACGTGGCTCGTGACCACGGACAA CACCATCGATGAAAGTTATCGTGTGGAAAGCCACCTGCGGCAGCGCGATGGAGTCTGGTGTATCCTGGCGTCCAGTTTCG CGGGGCCCTCAGACGCTCTGCCGGGTCGGATGCATCAAGCCAGCCTGGCAGCCCAACGCAACACTGCGGCCCACTTGGCC CATCGAGAGGACAGCCATGATTGA
Upstream 100 bases:
>100_bases TCAACCGCAGCCACGTGTCTTCGGGACGCTCGCCCTTTGGCATCCAAGGATTTCCTTTGCACGGGTCAACACGGCACGCT AGGAAATGGGTATGGCAAAG
Downstream 100 bases:
>100_bases CCATTCCGGCCTCAGCGTCTCGGATTTCGCGGCCGCCAAAGCGTTCTACTCTGCGGCCCTCGCGCCTCTTGGGTCGTCCT ACCTGTTCACGGTCCCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSRSDDVCDGDAMAAYQSFLDQSDAALEHDDFDTFISRILLPQLIIQGSERLIVTSTDEIRHVFHATRHMLATRNIRRRT RLCTNARLTGDGTLIGHHTTWLVTTDNTIDESYRVESHLRQRDGVWCILASSFAGPSDALPGRMHQASLAAQRNTAAHLA HREDSHD
Sequences:
>Translated_167_residues MSRSDDVCDGDAMAAYQSFLDQSDAALEHDDFDTFISRILLPQLIIQGSERLIVTSTDEIRHVFHATRHMLATRNIRRRT RLCTNARLTGDGTLIGHHTTWLVTTDNTIDESYRVESHLRQRDGVWCILASSFAGPSDALPGRMHQASLAAQRNTAAHLA HREDSHD >Mature_166_residues SRSDDVCDGDAMAAYQSFLDQSDAALEHDDFDTFISRILLPQLIIQGSERLIVTSTDEIRHVFHATRHMLATRNIRRRTR LCTNARLTGDGTLIGHHTTWLVTTDNTIDESYRVESHLRQRDGVWCILASSFAGPSDALPGRMHQASLAAQRNTAAHLAH REDSHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18764; Mature: 18633
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSDDVCDGDAMAAYQSFLDQSDAALEHDDFDTFISRILLPQLIIQGSERLIVTSTDEI CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHH RHVFHATRHMLATRNIRRRTRLCTNARLTGDGTLIGHHTTWLVTTDNTIDESYRVESHLR HHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEECCEEEEEEECCCCCHHHHHHHHHH QRDGVWCILASSFAGPSDALPGRMHQASLAAQRNTAAHLAHREDSHD HHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRSDDVCDGDAMAAYQSFLDQSDAALEHDDFDTFISRILLPQLIIQGSERLIVTSTDEI CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHH RHVFHATRHMLATRNIRRRTRLCTNARLTGDGTLIGHHTTWLVTTDNTIDESYRVESHLR HHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEECCEEEEEEECCCCCHHHHHHHHHH QRDGVWCILASSFAGPSDALPGRMHQASLAAQRNTAAHLAHREDSHD HHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA