Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055787

Identifier: 89055787

GI number: 89055787

Start: 3350599

End: 3350907

Strand: Direct

Name: 89055787

Synonym: Jann_3296

Alternate gene names: NA

Gene position: 3350599-3350907 (Clockwise)

Preceding gene: 89055786

Following gene: 89055788

Centisome position: 77.6

GC content: 64.08

Gene sequence:

>309_bases
ATGGCCGATACTGCCACACTGCTGCCCTGCCGCGCGATGACGAGGTTCGACGGCGACGACATGACCGAGATCGACATGCC
GGTGAAGATCGCGCTGTCGCCCGACAGAACGCGCGCCGAGGTCGCGACCCGGGACACCACATACACGCTGGTCGGAGGCT
CGATCGGGTTCGGCGACAAAAGCGAAGACTTCGACTTTGCCGCCGATGCTGTGACGTTGGGCCTGTCGCTTGGCCGGGGC
GGCATAGAAATTGACGGGACACTCACGGTGGACGGGGTGGCTTATGTCCTGTCCGGACCGCAGGGATAG

Upstream 100 bases:

>100_bases
CCGGTTCATGATGCGCGCAGGGGCACGCACCATGCCCTGTGCGCCGCGCGGGAGGCGGCCTGAGATGCGGACACCAAGCC
ATTCTGCCGGAGCGTCCCCC

Downstream 100 bases:

>100_bases
GATGAACCCATGCTGACCTTCACCATCCGCCGCCTGATCCTTGCGATCCCGACGCTGATCTTTATCAGCTTCATTATTTT
CCTGATCGTGAAGCTCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MADTATLLPCRAMTRFDGDDMTEIDMPVKIALSPDRTRAEVATRDTTYTLVGGSIGFGDKSEDFDFAADAVTLGLSLGRG
GIEIDGTLTVDGVAYVLSGPQG

Sequences:

>Translated_102_residues
MADTATLLPCRAMTRFDGDDMTEIDMPVKIALSPDRTRAEVATRDTTYTLVGGSIGFGDKSEDFDFAADAVTLGLSLGRG
GIEIDGTLTVDGVAYVLSGPQG
>Mature_101_residues
ADTATLLPCRAMTRFDGDDMTEIDMPVKIALSPDRTRAEVATRDTTYTLVGGSIGFGDKSEDFDFAADAVTLGLSLGRGG
IEIDGTLTVDGVAYVLSGPQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10663; Mature: 10532

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTATLLPCRAMTRFDGDDMTEIDMPVKIALSPDRTRAEVATRDTTYTLVGGSIGFGDK
CCCCCCCCCCCEEECCCCCCCEEECCCEEEEECCCCCCEEEEECCCEEEEECCCCCCCCC
SEDFDFAADAVTLGLSLGRGGIEIDGTLTVDGVAYVLSGPQG
CCCCCCCCCEEEEEEECCCCCEEECCEEEECCEEEEEECCCC
>Mature Secondary Structure 
ADTATLLPCRAMTRFDGDDMTEIDMPVKIALSPDRTRAEVATRDTTYTLVGGSIGFGDK
CCCCCCCCCCEEECCCCCCCEEECCCEEEEECCCCCCEEEEECCCEEEEECCCCCCCCC
SEDFDFAADAVTLGLSLGRGGIEIDGTLTVDGVAYVLSGPQG
CCCCCCCCCEEEEEEECCCCCEEECCEEEECCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA