| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055759
Identifier: 89055759
GI number: 89055759
Start: 3322774
End: 3323790
Strand: Direct
Name: 89055759
Synonym: Jann_3268
Alternate gene names: NA
Gene position: 3322774-3323790 (Clockwise)
Preceding gene: 89055758
Following gene: 89055760
Centisome position: 76.95
GC content: 61.85
Gene sequence:
>1017_bases ATGTTGGAAGACCAGCCTGCCCTTATCGTGACCGCGATGAAGAACGAGGGGCCATATATCATTGATTGGATCGCCCATAA TATGGCGGTGGGGTTCGACAGCTTCATGGTCGTCAGCAATGATTGCAACGATCACACCGACCGCATCCTGGACCGGCTGG AAAAGCTGATCCCGCTCAAGCACGTCGCCAACCCCAAATCGCTGTTTCCTGAAAAGACCAACTGGCAGGTCATGGCCGTG CGCTACGCGACCCTGTTCAACATCTACAAGGATGCGGGCTGGATCTACTTCACCGATGTGGATGAGTTTTTGCAGGTCTG GACGGGCGACGGCACGCTACAGGCCCTGCACGATGCGGCGGGCGGGTTCGATGTGATCTCGCTCACCTCCATGCCCTTCG GCTCGTCAGGCGTCGCCCATATCGACGATGCTCCGGCAACTGCGCAGTTTACCGTGCAGTCAAAGGATTACGACCGCGTG CAGGAGACGGGCGAACGCAATTCCAACGCCATCAAGACCATGTTCCACAACCGCATCAAGTTCTCCGTGCGGCGCAACCA CCGTCCCCGGCGCCACGATTTCTCGACCACCGGCTACCGCTGGGTCGATGGCTCCGGGCGCGTCTTTTCGGATGATTGGG TGAACGGCAAGGAAAAGGCCGTCTCGCCCATCGGTTCCACGGATCTGGCGCAGTTCAACCATTATGCGATCCGGTCGGAG GATGGCTATCTGATGAAGGTGTCGCGCGGGGATGTGGTGGGCGCACCGCGCCTCGATACCGAGCGCAGCGTCAAATACTG GCGCTTCTACAACGCCCAAGGCAGCGTGGACACGCGCGCCGTGGCAGGCCACCCCCGAACGGCGCAGATCCGGGCCGAGT TGATGGCTGACCCGGACCTGCGCGACTGGCACGAGACCTCCGTCGCGTTCCACCGGGACAGCGCCGCCAGGTTGCGGGAC CGCGACGACTTCGCCCATCTGCTGGAGCGCATGGCCGCCGTGCCGACCGCGCCATGA
Upstream 100 bases:
>100_bases CGCAGCTCTGGACCGACCCTCCGCGGGCCGATCTGGAGGCGCGGTTGACCGCACTCTCAGCATCTTTTGAAGCAGAGCTA AGCTACAGGGATCTGCGCTG
Downstream 100 bases:
>100_bases GCTTCACCGTCGCCACCATCGCGCGGGAGCCCTGGCCCGTTCTCAACCGCTTCCTCACCTGGCATCTGGATCAGGGGGCG GAGCGGATCATCCTCTACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MLEDQPALIVTAMKNEGPYIIDWIAHNMAVGFDSFMVVSNDCNDHTDRILDRLEKLIPLKHVANPKSLFPEKTNWQVMAV RYATLFNIYKDAGWIYFTDVDEFLQVWTGDGTLQALHDAAGGFDVISLTSMPFGSSGVAHIDDAPATAQFTVQSKDYDRV QETGERNSNAIKTMFHNRIKFSVRRNHRPRRHDFSTTGYRWVDGSGRVFSDDWVNGKEKAVSPIGSTDLAQFNHYAIRSE DGYLMKVSRGDVVGAPRLDTERSVKYWRFYNAQGSVDTRAVAGHPRTAQIRAELMADPDLRDWHETSVAFHRDSAARLRD RDDFAHLLERMAAVPTAP
Sequences:
>Translated_338_residues MLEDQPALIVTAMKNEGPYIIDWIAHNMAVGFDSFMVVSNDCNDHTDRILDRLEKLIPLKHVANPKSLFPEKTNWQVMAV RYATLFNIYKDAGWIYFTDVDEFLQVWTGDGTLQALHDAAGGFDVISLTSMPFGSSGVAHIDDAPATAQFTVQSKDYDRV QETGERNSNAIKTMFHNRIKFSVRRNHRPRRHDFSTTGYRWVDGSGRVFSDDWVNGKEKAVSPIGSTDLAQFNHYAIRSE DGYLMKVSRGDVVGAPRLDTERSVKYWRFYNAQGSVDTRAVAGHPRTAQIRAELMADPDLRDWHETSVAFHRDSAARLRD RDDFAHLLERMAAVPTAP >Mature_338_residues MLEDQPALIVTAMKNEGPYIIDWIAHNMAVGFDSFMVVSNDCNDHTDRILDRLEKLIPLKHVANPKSLFPEKTNWQVMAV RYATLFNIYKDAGWIYFTDVDEFLQVWTGDGTLQALHDAAGGFDVISLTSMPFGSSGVAHIDDAPATAQFTVQSKDYDRV QETGERNSNAIKTMFHNRIKFSVRRNHRPRRHDFSTTGYRWVDGSGRVFSDDWVNGKEKAVSPIGSTDLAQFNHYAIRSE DGYLMKVSRGDVVGAPRLDTERSVKYWRFYNAQGSVDTRAVAGHPRTAQIRAELMADPDLRDWHETSVAFHRDSAARLRD RDDFAHLLERMAAVPTAP
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38313; Mature: 38313
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEDQPALIVTAMKNEGPYIIDWIAHNMAVGFDSFMVVSNDCNDHTDRILDRLEKLIPLK CCCCCCCEEEEEECCCCCEEEEEEHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCHH HVANPKSLFPEKTNWQVMAVRYATLFNIYKDAGWIYFTDVDEFLQVWTGDGTLQALHDAA HCCCCHHHCCCCCCCEEEEEHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCHHHHHHHCC GGFDVISLTSMPFGSSGVAHIDDAPATAQFTVQSKDYDRVQETGERNSNAIKTMFHNRIK CCEEEEEEECCCCCCCCCEECCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHEE FSVRRNHRPRRHDFSTTGYRWVDGSGRVFSDDWVNGKEKAVSPIGSTDLAQFNHYAIRSE EEECCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCHHHHCCCCCCCHHHHCCCEEEECC DGYLMKVSRGDVVGAPRLDTERSVKYWRFYNAQGSVDTRAVAGHPRTAQIRAELMADPDL CCEEEEEECCCEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCHHHHHHEECCCCCC RDWHETSVAFHRDSAARLRDRDDFAHLLERMAAVPTAP CHHHHHHEEEECCCHHHHCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLEDQPALIVTAMKNEGPYIIDWIAHNMAVGFDSFMVVSNDCNDHTDRILDRLEKLIPLK CCCCCCCEEEEEECCCCCEEEEEEHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCHH HVANPKSLFPEKTNWQVMAVRYATLFNIYKDAGWIYFTDVDEFLQVWTGDGTLQALHDAA HCCCCHHHCCCCCCCEEEEEHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCHHHHHHHCC GGFDVISLTSMPFGSSGVAHIDDAPATAQFTVQSKDYDRVQETGERNSNAIKTMFHNRIK CCEEEEEEECCCCCCCCCEECCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHEE FSVRRNHRPRRHDFSTTGYRWVDGSGRVFSDDWVNGKEKAVSPIGSTDLAQFNHYAIRSE EEECCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCHHHHCCCCCCCHHHHCCCEEEECC DGYLMKVSRGDVVGAPRLDTERSVKYWRFYNAQGSVDTRAVAGHPRTAQIRAELMADPDL CCEEEEEECCCEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCHHHHHHEECCCCCC RDWHETSVAFHRDSAARLRDRDDFAHLLERMAAVPTAP CHHHHHHEEEECCCHHHHCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA