Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055759

Identifier: 89055759

GI number: 89055759

Start: 3322774

End: 3323790

Strand: Direct

Name: 89055759

Synonym: Jann_3268

Alternate gene names: NA

Gene position: 3322774-3323790 (Clockwise)

Preceding gene: 89055758

Following gene: 89055760

Centisome position: 76.95

GC content: 61.85

Gene sequence:

>1017_bases
ATGTTGGAAGACCAGCCTGCCCTTATCGTGACCGCGATGAAGAACGAGGGGCCATATATCATTGATTGGATCGCCCATAA
TATGGCGGTGGGGTTCGACAGCTTCATGGTCGTCAGCAATGATTGCAACGATCACACCGACCGCATCCTGGACCGGCTGG
AAAAGCTGATCCCGCTCAAGCACGTCGCCAACCCCAAATCGCTGTTTCCTGAAAAGACCAACTGGCAGGTCATGGCCGTG
CGCTACGCGACCCTGTTCAACATCTACAAGGATGCGGGCTGGATCTACTTCACCGATGTGGATGAGTTTTTGCAGGTCTG
GACGGGCGACGGCACGCTACAGGCCCTGCACGATGCGGCGGGCGGGTTCGATGTGATCTCGCTCACCTCCATGCCCTTCG
GCTCGTCAGGCGTCGCCCATATCGACGATGCTCCGGCAACTGCGCAGTTTACCGTGCAGTCAAAGGATTACGACCGCGTG
CAGGAGACGGGCGAACGCAATTCCAACGCCATCAAGACCATGTTCCACAACCGCATCAAGTTCTCCGTGCGGCGCAACCA
CCGTCCCCGGCGCCACGATTTCTCGACCACCGGCTACCGCTGGGTCGATGGCTCCGGGCGCGTCTTTTCGGATGATTGGG
TGAACGGCAAGGAAAAGGCCGTCTCGCCCATCGGTTCCACGGATCTGGCGCAGTTCAACCATTATGCGATCCGGTCGGAG
GATGGCTATCTGATGAAGGTGTCGCGCGGGGATGTGGTGGGCGCACCGCGCCTCGATACCGAGCGCAGCGTCAAATACTG
GCGCTTCTACAACGCCCAAGGCAGCGTGGACACGCGCGCCGTGGCAGGCCACCCCCGAACGGCGCAGATCCGGGCCGAGT
TGATGGCTGACCCGGACCTGCGCGACTGGCACGAGACCTCCGTCGCGTTCCACCGGGACAGCGCCGCCAGGTTGCGGGAC
CGCGACGACTTCGCCCATCTGCTGGAGCGCATGGCCGCCGTGCCGACCGCGCCATGA

Upstream 100 bases:

>100_bases
CGCAGCTCTGGACCGACCCTCCGCGGGCCGATCTGGAGGCGCGGTTGACCGCACTCTCAGCATCTTTTGAAGCAGAGCTA
AGCTACAGGGATCTGCGCTG

Downstream 100 bases:

>100_bases
GCTTCACCGTCGCCACCATCGCGCGGGAGCCCTGGCCCGTTCTCAACCGCTTCCTCACCTGGCATCTGGATCAGGGGGCG
GAGCGGATCATCCTCTACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MLEDQPALIVTAMKNEGPYIIDWIAHNMAVGFDSFMVVSNDCNDHTDRILDRLEKLIPLKHVANPKSLFPEKTNWQVMAV
RYATLFNIYKDAGWIYFTDVDEFLQVWTGDGTLQALHDAAGGFDVISLTSMPFGSSGVAHIDDAPATAQFTVQSKDYDRV
QETGERNSNAIKTMFHNRIKFSVRRNHRPRRHDFSTTGYRWVDGSGRVFSDDWVNGKEKAVSPIGSTDLAQFNHYAIRSE
DGYLMKVSRGDVVGAPRLDTERSVKYWRFYNAQGSVDTRAVAGHPRTAQIRAELMADPDLRDWHETSVAFHRDSAARLRD
RDDFAHLLERMAAVPTAP

Sequences:

>Translated_338_residues
MLEDQPALIVTAMKNEGPYIIDWIAHNMAVGFDSFMVVSNDCNDHTDRILDRLEKLIPLKHVANPKSLFPEKTNWQVMAV
RYATLFNIYKDAGWIYFTDVDEFLQVWTGDGTLQALHDAAGGFDVISLTSMPFGSSGVAHIDDAPATAQFTVQSKDYDRV
QETGERNSNAIKTMFHNRIKFSVRRNHRPRRHDFSTTGYRWVDGSGRVFSDDWVNGKEKAVSPIGSTDLAQFNHYAIRSE
DGYLMKVSRGDVVGAPRLDTERSVKYWRFYNAQGSVDTRAVAGHPRTAQIRAELMADPDLRDWHETSVAFHRDSAARLRD
RDDFAHLLERMAAVPTAP
>Mature_338_residues
MLEDQPALIVTAMKNEGPYIIDWIAHNMAVGFDSFMVVSNDCNDHTDRILDRLEKLIPLKHVANPKSLFPEKTNWQVMAV
RYATLFNIYKDAGWIYFTDVDEFLQVWTGDGTLQALHDAAGGFDVISLTSMPFGSSGVAHIDDAPATAQFTVQSKDYDRV
QETGERNSNAIKTMFHNRIKFSVRRNHRPRRHDFSTTGYRWVDGSGRVFSDDWVNGKEKAVSPIGSTDLAQFNHYAIRSE
DGYLMKVSRGDVVGAPRLDTERSVKYWRFYNAQGSVDTRAVAGHPRTAQIRAELMADPDLRDWHETSVAFHRDSAARLRD
RDDFAHLLERMAAVPTAP

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38313; Mature: 38313

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEDQPALIVTAMKNEGPYIIDWIAHNMAVGFDSFMVVSNDCNDHTDRILDRLEKLIPLK
CCCCCCCEEEEEECCCCCEEEEEEHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCHH
HVANPKSLFPEKTNWQVMAVRYATLFNIYKDAGWIYFTDVDEFLQVWTGDGTLQALHDAA
HCCCCHHHCCCCCCCEEEEEHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCHHHHHHHCC
GGFDVISLTSMPFGSSGVAHIDDAPATAQFTVQSKDYDRVQETGERNSNAIKTMFHNRIK
CCEEEEEEECCCCCCCCCEECCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHEE
FSVRRNHRPRRHDFSTTGYRWVDGSGRVFSDDWVNGKEKAVSPIGSTDLAQFNHYAIRSE
EEECCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCHHHHCCCCCCCHHHHCCCEEEECC
DGYLMKVSRGDVVGAPRLDTERSVKYWRFYNAQGSVDTRAVAGHPRTAQIRAELMADPDL
CCEEEEEECCCEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCHHHHHHEECCCCCC
RDWHETSVAFHRDSAARLRDRDDFAHLLERMAAVPTAP
CHHHHHHEEEECCCHHHHCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLEDQPALIVTAMKNEGPYIIDWIAHNMAVGFDSFMVVSNDCNDHTDRILDRLEKLIPLK
CCCCCCCEEEEEECCCCCEEEEEEHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCHH
HVANPKSLFPEKTNWQVMAVRYATLFNIYKDAGWIYFTDVDEFLQVWTGDGTLQALHDAA
HCCCCHHHCCCCCCCEEEEEHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCHHHHHHHCC
GGFDVISLTSMPFGSSGVAHIDDAPATAQFTVQSKDYDRVQETGERNSNAIKTMFHNRIK
CCEEEEEEECCCCCCCCCEECCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHEE
FSVRRNHRPRRHDFSTTGYRWVDGSGRVFSDDWVNGKEKAVSPIGSTDLAQFNHYAIRSE
EEECCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCHHHHCCCCCCCHHHHCCCEEEECC
DGYLMKVSRGDVVGAPRLDTERSVKYWRFYNAQGSVDTRAVAGHPRTAQIRAELMADPDL
CCEEEEEECCCEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCHHHHHHEECCCCCC
RDWHETSVAFHRDSAARLRDRDDFAHLLERMAAVPTAP
CHHHHHHEEEECCCHHHHCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA