Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055758

Identifier: 89055758

GI number: 89055758

Start: 3321623

End: 3322774

Strand: Direct

Name: 89055758

Synonym: Jann_3267

Alternate gene names: NA

Gene position: 3321623-3322774 (Clockwise)

Preceding gene: 89055757

Following gene: 89055759

Centisome position: 76.93

GC content: 63.54

Gene sequence:

>1152_bases
ATGACCCACGACACCGGCGACGATCAGGCCCCCCCATGCCTCGACTACGACCCGGATGCGCCGATCAACTGGACGCCCAC
TTGGCACCGCAACGTGACAGCCTACCCCTGGGCGCAGAACGAACCCCGGGGCTACCGCCGCGCCGCTGGCATGTTCGGTG
CGGATGGCCAGCACCTGACTGACAGCCATTGTTGGCGTTATGCCCATGAGCCGATGACCATCGTGCCAGAGCGTGATGAC
ATCAATGCGCCCAATGATCTGGTCGAAGGCCGTTGGCTCTTTGCCGGCATGTTCTACGCCCATTTCGGGCACTTCCTGGT
GGAGACGACGCAGCGCCTCTACGCTCTCGCAGATCATGCCGATGTGGATGGGATCTTCTTTTACCCCAAGCCGCGCCTGA
CCCATGAATTCAAACCCTACCGCGCCCTCAAACCGATCTTCGCGCATCTGGGCCTGGCCGATGTGAAGGTGCGTCTTCCT
CAAAAGCCCGTGCGGATCGAACAGATCGCCTTTCCTCCCCCCGCCTTCGGGATCGGAGAGATGTCCGCAGGCCGCCCCGA
ATACCGCGCCTTCATGCGCGACCGGCTGACGCGCGACACGCCGCCCGAGGGCGCCCGCGATATTTACATCACCCGCTCGG
GCCTGACATCGCGGCGGGGGCGCATCGTGATGGAGGAGCATATGGAGGCGCTGATGGCCGCCGAAGGCTATCGCATCTTC
CACCCCCAGGGTCACAGTCTGGCGGAGCAGGTCGCTCAATACCGGGCCGCCCGGCGGATCGTGGCGCTGGATGGCTCGGC
CCTGCATCTCACCGCTATGGTGGCAGAGCCGGAAACGAAAATCGCGATCATCAACCGCGGCCCCTCGGCCAATGTCGAAG
ATTACATGCGTCAGTTCCGCAGCTTCGCGGGCATCGAGCCCACGCGGATCGAGGCAATCAAAGGTTGCTGGCATCCGGCG
GATCGGCGCTTTGTCAAACGTGAAGTGCAGGCGCATCTGGACTTTCCCAGCGCCGCGCACCAACTGGCCGAGGCGGGTTT
CGTTGCGAAACCGCAGCTCTGGACCGACCCTCCGCGGGCCGATCTGGAGGCGCGGTTGACCGCACTCTCAGCATCTTTTG
AAGCAGAGCTAAGCTACAGGGATCTGCGCTGA

Upstream 100 bases:

>100_bases
ATGGCACCAAACCCTGGTGGCGCAAAAACCCACCGCTGGAAAATTCCTATGCCTGGCGCATGTGCCAGGAGGTCGGCATC
ACGCCGGAGGACGCGTTGGA

Downstream 100 bases:

>100_bases
TGTTGGAAGACCAGCCTGCCCTTATCGTGACCGCGATGAAGAACGAGGGGCCATATATCATTGATTGGATCGCCCATAAT
ATGGCGGTGGGGTTCGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MTHDTGDDQAPPCLDYDPDAPINWTPTWHRNVTAYPWAQNEPRGYRRAAGMFGADGQHLTDSHCWRYAHEPMTIVPERDD
INAPNDLVEGRWLFAGMFYAHFGHFLVETTQRLYALADHADVDGIFFYPKPRLTHEFKPYRALKPIFAHLGLADVKVRLP
QKPVRIEQIAFPPPAFGIGEMSAGRPEYRAFMRDRLTRDTPPEGARDIYITRSGLTSRRGRIVMEEHMEALMAAEGYRIF
HPQGHSLAEQVAQYRAARRIVALDGSALHLTAMVAEPETKIAIINRGPSANVEDYMRQFRSFAGIEPTRIEAIKGCWHPA
DRRFVKREVQAHLDFPSAAHQLAEAGFVAKPQLWTDPPRADLEARLTALSASFEAELSYRDLR

Sequences:

>Translated_383_residues
MTHDTGDDQAPPCLDYDPDAPINWTPTWHRNVTAYPWAQNEPRGYRRAAGMFGADGQHLTDSHCWRYAHEPMTIVPERDD
INAPNDLVEGRWLFAGMFYAHFGHFLVETTQRLYALADHADVDGIFFYPKPRLTHEFKPYRALKPIFAHLGLADVKVRLP
QKPVRIEQIAFPPPAFGIGEMSAGRPEYRAFMRDRLTRDTPPEGARDIYITRSGLTSRRGRIVMEEHMEALMAAEGYRIF
HPQGHSLAEQVAQYRAARRIVALDGSALHLTAMVAEPETKIAIINRGPSANVEDYMRQFRSFAGIEPTRIEAIKGCWHPA
DRRFVKREVQAHLDFPSAAHQLAEAGFVAKPQLWTDPPRADLEARLTALSASFEAELSYRDLR
>Mature_382_residues
THDTGDDQAPPCLDYDPDAPINWTPTWHRNVTAYPWAQNEPRGYRRAAGMFGADGQHLTDSHCWRYAHEPMTIVPERDDI
NAPNDLVEGRWLFAGMFYAHFGHFLVETTQRLYALADHADVDGIFFYPKPRLTHEFKPYRALKPIFAHLGLADVKVRLPQ
KPVRIEQIAFPPPAFGIGEMSAGRPEYRAFMRDRLTRDTPPEGARDIYITRSGLTSRRGRIVMEEHMEALMAAEGYRIFH
PQGHSLAEQVAQYRAARRIVALDGSALHLTAMVAEPETKIAIINRGPSANVEDYMRQFRSFAGIEPTRIEAIKGCWHPAD
RRFVKREVQAHLDFPSAAHQLAEAGFVAKPQLWTDPPRADLEARLTALSASFEAELSYRDLR

Specific function: Unknown

COG id: COG4421

COG function: function code G; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43552; Mature: 43421

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHDTGDDQAPPCLDYDPDAPINWTPTWHRNVTAYPWAQNEPRGYRRAAGMFGADGQHLT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCC
DSHCWRYAHEPMTIVPERDDINAPNDLVEGRWLFAGMFYAHFGHFLVETTQRLYALADHA
HHHHHHHHCCCEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DVDGIFFYPKPRLTHEFKPYRALKPIFAHLGLADVKVRLPQKPVRIEQIAFPPPAFGIGE
CCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCC
MSAGRPEYRAFMRDRLTRDTPPEGARDIYITRSGLTSRRGRIVMEEHMEALMAAEGYRIF
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEE
HPQGHSLAEQVAQYRAARRIVALDGSALHLTAMVAEPETKIAIINRGPSANVEDYMRQFR
CCCCHHHHHHHHHHHHHCEEEEECCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHH
SFAGIEPTRIEAIKGCWHPADRRFVKREVQAHLDFPSAAHQLAEAGFVAKPQLWTDPPRA
HHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
DLEARLTALSASFEAELSYRDLR
CHHHHHHHHHCCHHCCCCCCCCC
>Mature Secondary Structure 
THDTGDDQAPPCLDYDPDAPINWTPTWHRNVTAYPWAQNEPRGYRRAAGMFGADGQHLT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCC
DSHCWRYAHEPMTIVPERDDINAPNDLVEGRWLFAGMFYAHFGHFLVETTQRLYALADHA
HHHHHHHHCCCEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DVDGIFFYPKPRLTHEFKPYRALKPIFAHLGLADVKVRLPQKPVRIEQIAFPPPAFGIGE
CCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCC
MSAGRPEYRAFMRDRLTRDTPPEGARDIYITRSGLTSRRGRIVMEEHMEALMAAEGYRIF
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEE
HPQGHSLAEQVAQYRAARRIVALDGSALHLTAMVAEPETKIAIINRGPSANVEDYMRQFR
CCCCHHHHHHHHHHHHHCEEEEECCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHH
SFAGIEPTRIEAIKGCWHPADRRFVKREVQAHLDFPSAAHQLAEAGFVAKPQLWTDPPRA
HHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
DLEARLTALSASFEAELSYRDLR
CHHHHHHHHHCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA