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The map label for this gene is potC [H]

Identifier: 89055727

GI number: 89055727

Start: 3284092

End: 3284880

Strand: Direct

Name: potC [H]

Synonym: Jann_3236

Alternate gene names: 89055727

Gene position: 3284092-3284880 (Clockwise)

Preceding gene: 89055726

Following gene: 89055728

Centisome position: 76.06

GC content: 59.82

Gene sequence:

>789_bases
ATGACCCACCGCACCCACCCGCTTTTGATCGTGATGACCGTGCTGGTCTATTTCTTCCTGCTCGGGCCTTTGGTCATCAT
CTTCGGGGCGTCCGTCTCTGACACCACATTTCTTGCCTTCCCGCCCCAGGGCCTGACGCTGCATTGGTTCGAGAACATCT
GGGAGATCTCGGCCTTCCGGCGCACCATCGTGACGTCGTTCCAAGTGGCCATCATGGGCACGCTTCTGGCGCTTTTGATC
GGAATCCCCGCCGCCTATGCCCTGAACCGCCACCGCATCCACTTGCCCGGATGGCTATCGACTTTGTTCATCCTGCCCAT
TCTGGTGCCCGAGATTGTCATCGGCTTCTCGCTCCTGCGGTCTGTCAACGTTGGCCTTGGCGTCCCGGTCTTTGCGTCGC
TTCTGATCGGGCACACGCTGTTGGTGCTGCCCTACGTCGTGCGCGTGATTTCCGCCGCGTTGGCGTCGTTCGACTTTTCC
ATCGAGGAGGCCGCGATTTCGCTCGGCAGCCATCCGGTTAAGACCTTCTTCACCATCGTTCTGCCCAATGTCCGCTCCGG
CGTGATTGCGGCCTTCATCCTCGCGTTCATCACCTCAATCAACGACGTGTCGGTGTCGCTGTTCCTGACCGGCCCCGGCA
TCTCGACGCTGCCGATCCAGATCCTCGCCCATGTGGAGCAGTTCTTTGACCCGACCGTCGCGTCCGTCTCCGTCCTACTG
ATGATGCTGACCATCATCGTCATGATCATCGTCGAACGGACGCTGGGTCTGACGATCGTGGCCAAGTAA

Upstream 100 bases:

>100_bases
AGTGCGTCGACCGTGGCGGCGATCATGGTCGTGGTGATCGTCACAACCGTGCTGGTCATGACGCGCATCGCCAAGCGCCT
GAACCCGATGGCATCGTGAC

Downstream 100 bases:

>100_bases
CGAAAGCCCCATTGAATGACCCTACCCCTATCCATCGATCAGATCACGGCCCACTACGGGACCACCAAGGTGCTGGAGGA
TCTGTCGCTGTCCGTGGCGG

Product: binding-protein-dependent transport systems inner membrane component

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTHRTHPLLIVMTVLVYFFLLGPLVIIFGASVSDTTFLAFPPQGLTLHWFENIWEISAFRRTIVTSFQVAIMGTLLALLI
GIPAAYALNRHRIHLPGWLSTLFILPILVPEIVIGFSLLRSVNVGLGVPVFASLLIGHTLLVLPYVVRVISAALASFDFS
IEEAAISLGSHPVKTFFTIVLPNVRSGVIAAFILAFITSINDVSVSLFLTGPGISTLPIQILAHVEQFFDPTVASVSVLL
MMLTIIVMIIVERTLGLTIVAK

Sequences:

>Translated_262_residues
MTHRTHPLLIVMTVLVYFFLLGPLVIIFGASVSDTTFLAFPPQGLTLHWFENIWEISAFRRTIVTSFQVAIMGTLLALLI
GIPAAYALNRHRIHLPGWLSTLFILPILVPEIVIGFSLLRSVNVGLGVPVFASLLIGHTLLVLPYVVRVISAALASFDFS
IEEAAISLGSHPVKTFFTIVLPNVRSGVIAAFILAFITSINDVSVSLFLTGPGISTLPIQILAHVEQFFDPTVASVSVLL
MMLTIIVMIIVERTLGLTIVAK
>Mature_261_residues
THRTHPLLIVMTVLVYFFLLGPLVIIFGASVSDTTFLAFPPQGLTLHWFENIWEISAFRRTIVTSFQVAIMGTLLALLIG
IPAAYALNRHRIHLPGWLSTLFILPILVPEIVIGFSLLRSVNVGLGVPVFASLLIGHTLLVLPYVVRVISAALASFDFSI
EEAAISLGSHPVKTFFTIVLPNVRSGVIAAFILAFITSINDVSVSLFLTGPGISTLPIQILAHVEQFFDPTVASVSVLLM
MLTIIVMIIVERTLGLTIVAK

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=210, Percent_Identity=31.4285714285714, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1787714, Length=230, Percent_Identity=34.7826086956522, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787081, Length=243, Percent_Identity=27.9835390946502, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787080, Length=209, Percent_Identity=32.5358851674641, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28510; Mature: 28379

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHRTHPLLIVMTVLVYFFLLGPLVIIFGASVSDTTFLAFPPQGLTLHWFENIWEISAFR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
RTIVTSFQVAIMGTLLALLIGIPAAYALNRHRIHLPGWLSTLFILPILVPEIVIGFSLLR
HHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH
SVNVGLGVPVFASLLIGHTLLVLPYVVRVISAALASFDFSIEEAAISLGSHPVKTFFTIV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHH
LPNVRSGVIAAFILAFITSINDVSVSLFLTGPGISTLPIQILAHVEQFFDPTVASVSVLL
CCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
MMLTIIVMIIVERTLGLTIVAK
HHHHHHHHHHHHHHHCEEEEEC
>Mature Secondary Structure 
THRTHPLLIVMTVLVYFFLLGPLVIIFGASVSDTTFLAFPPQGLTLHWFENIWEISAFR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
RTIVTSFQVAIMGTLLALLIGIPAAYALNRHRIHLPGWLSTLFILPILVPEIVIGFSLLR
HHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH
SVNVGLGVPVFASLLIGHTLLVLPYVVRVISAALASFDFSIEEAAISLGSHPVKTFFTIV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHH
LPNVRSGVIAAFILAFITSINDVSVSLFLTGPGISTLPIQILAHVEQFFDPTVASVSVLL
CCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
MMLTIIVMIIVERTLGLTIVAK
HHHHHHHHHHHHHHHCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]