| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89055712
Identifier: 89055712
GI number: 89055712
Start: 3268508
End: 3268777
Strand: Direct
Name: 89055712
Synonym: Jann_3221
Alternate gene names: NA
Gene position: 3268508-3268777 (Clockwise)
Preceding gene: 89055711
Following gene: 89055713
Centisome position: 75.7
GC content: 54.81
Gene sequence:
>270_bases TTGGGTCGATCCGGCTTAGACGCCGATGGCGACCTCATCCCTTGGCGCATCAAACGCCGTTCTGTGTCTCAAAATACTCT AGGCCAGGCGCGCCAATTTGTTGGCCAAGGCAACGGCGAGCTTGTTTCGGTTCATCCGCTCTGCGGCCTTGATCAACCAA TCGCCAAAGCTGAAGTCCGGCCATCGATTGGTCCGCATCAAGATAACCTTGGCAGCTTGGACAAAGAGCATTCGCAAATA TCGACTGCCACGTTTGGTGATGCGTCCTGA
Upstream 100 bases:
>100_bases GTGATCTAATTACCGGCAAGATCTATGATGACCGTTTGGGCCGTCAGACTCCGGGGGCGTAATTGTTCCGTTCCATGCTT TCTATCTATCGCGAACTCCT
Downstream 100 bases:
>100_bases CCTGCTCCCCTGAAATGTCCGGCATTTAGAGTTAGCCTGTTCTCCAACTGAGGAGACAGACGATGAAGAGAAGCCGTTTC AGCGAAGAACAGATCATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MGRSGLDADGDLIPWRIKRRSVSQNTLGQARQFVGQGNGELVSVHPLCGLDQPIAKAEVRPSIGPHQDNLGSLDKEHSQI STATFGDAS
Sequences:
>Translated_89_residues MGRSGLDADGDLIPWRIKRRSVSQNTLGQARQFVGQGNGELVSVHPLCGLDQPIAKAEVRPSIGPHQDNLGSLDKEHSQI STATFGDAS >Mature_88_residues GRSGLDADGDLIPWRIKRRSVSQNTLGQARQFVGQGNGELVSVHPLCGLDQPIAKAEVRPSIGPHQDNLGSLDKEHSQIS TATFGDAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9492; Mature: 9360
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRSGLDADGDLIPWRIKRRSVSQNTLGQARQFVGQGNGELVSVHPLCGLDQPIAKAEVR CCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCC PSIGPHQDNLGSLDKEHSQISTATFGDAS CCCCCCCCCCCCCCCCCHHCCCCCCCCCC >Mature Secondary Structure GRSGLDADGDLIPWRIKRRSVSQNTLGQARQFVGQGNGELVSVHPLCGLDQPIAKAEVR CCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCC PSIGPHQDNLGSLDKEHSQISTATFGDAS CCCCCCCCCCCCCCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA