| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yieO [C]
Identifier: 89055709
GI number: 89055709
Start: 3262788
End: 3263996
Strand: Direct
Name: yieO [C]
Synonym: Jann_3218
Alternate gene names: 89055709
Gene position: 3262788-3263996 (Clockwise)
Preceding gene: 89055708
Following gene: 89055710
Centisome position: 75.56
GC content: 55.33
Gene sequence:
>1209_bases ATGGCTGAGCAACACCTCTCGCAATTGGAGCCGAAAGCAACAGACATCCGCAGGATAACCGGAGGGCTGGCCGTGCCCCG TGCCGTGATTATCGGACCTATCGCGGCGTACATCGCCTTTGTGATGGAGTTCACCCTCGTCCCGCTGTTGTTGCCTGCCA TACAGTCGCAGTTCGGCTTGTCGGTCGGGGATCTTGCCTGGGTGTTCAACTCTTACGGTGCGGCGGTCGCCATTGGCGTG CTGTTTTGCGGATACTTCGGCGACACCCTCAACATCAGGCGGGTGTTTGGATTAGGGGTCGCCCTGTTTGCGACGGGGGC GCTGGTATCAGCAATAGCGCAGAACTATGAAACCCTTGTTGCCGGGCGACTTTTGCAAGGTTTTGGGAGCGGTGTTTTCT CCCCACTTGTGCCGATATATTTGACGCGCGCCTCCCCAGACACGCCGGGACGCGCATTGATATTATGGGGAAGTATAGCA GGCTACATCGCTGCTTTCGCCCCCCTTCTATACGGCAATCTCCTTGGGGATCACAGCTGGAGATTAGCATTCGTCTTCAT CGCGATCATCGCCGCGTGCGCATGGGTTTTGCTGACCAGATCACAGCTATCGCAAGACCCGGAACCTGCCACATCATGCA AGCGGGACTACCGCGAAATCTTACGTAGCCGAGACCTTCTGATCACTTTTGCATACGTGTTCTGCACGTACGGCAGCATT ACCTATTACATATTTCGCCTGCCGATTTGGCTGTCCGAGAATGAGATCGGTGCCTCCAGCATAGGCCTTTTCTTATCAGT GGCGTGGCTCACCTTTTCCTTTATCAGCACCCTGCTGAGGAACCTGGTCGATCGCCATCATATTCTAGGGATCATGCTTG CGGCCCCGCTCCTTATCGCCGTCGCGGTGCTACTTTTGTTCAATCATCAAAGCTTCCTGCTCGTCGCGCTGTCGTCAATT CTGATCGGTGCAGGACTGGCGTGCAGCAATGCGCCGTCGACACAGTTGATCCTGAGATTTGCACCAGAGGGAATGACCGC GGTTTCGGCAAGCCTGGACATCACGTTTGCACGGATAGGTGGAATCGCAACAATATCCATTCTGGCATGGATGGAGGGAG GGTACGCTGATCTTACGATATGCGTCTTGTGCCTATTGGCACTGGTCTGTGCGCAAAGTGTAAGCCGCAGCCGCATCGGG ACAGGTTAA
Upstream 100 bases:
>100_bases TCAAAAACACGACCAGCAGCCCAAGGCGCGGCCGGTGCCCCCAAGACAACGGTTGCCGCTTCACTCGCGCAAGCCGCTCT TGATGTGGGGGTACGAGTCA
Downstream 100 bases:
>100_bases TCTCTCACAGGTGGCGGTTTAACGCGCCGATGGGAAGCAAAGCACACGCGCCTTCGACCGGTGGCGCGTCGTGTTTTGTT AACCACTCGTTAACTACTGG
Product: major facilitator transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MAEQHLSQLEPKATDIRRITGGLAVPRAVIIGPIAAYIAFVMEFTLVPLLLPAIQSQFGLSVGDLAWVFNSYGAAVAIGV LFCGYFGDTLNIRRVFGLGVALFATGALVSAIAQNYETLVAGRLLQGFGSGVFSPLVPIYLTRASPDTPGRALILWGSIA GYIAAFAPLLYGNLLGDHSWRLAFVFIAIIAACAWVLLTRSQLSQDPEPATSCKRDYREILRSRDLLITFAYVFCTYGSI TYYIFRLPIWLSENEIGASSIGLFLSVAWLTFSFISTLLRNLVDRHHILGIMLAAPLLIAVAVLLLFNHQSFLLVALSSI LIGAGLACSNAPSTQLILRFAPEGMTAVSASLDITFARIGGIATISILAWMEGGYADLTICVLCLLALVCAQSVSRSRIG TG
Sequences:
>Translated_402_residues MAEQHLSQLEPKATDIRRITGGLAVPRAVIIGPIAAYIAFVMEFTLVPLLLPAIQSQFGLSVGDLAWVFNSYGAAVAIGV LFCGYFGDTLNIRRVFGLGVALFATGALVSAIAQNYETLVAGRLLQGFGSGVFSPLVPIYLTRASPDTPGRALILWGSIA GYIAAFAPLLYGNLLGDHSWRLAFVFIAIIAACAWVLLTRSQLSQDPEPATSCKRDYREILRSRDLLITFAYVFCTYGSI TYYIFRLPIWLSENEIGASSIGLFLSVAWLTFSFISTLLRNLVDRHHILGIMLAAPLLIAVAVLLLFNHQSFLLVALSSI LIGAGLACSNAPSTQLILRFAPEGMTAVSASLDITFARIGGIATISILAWMEGGYADLTICVLCLLALVCAQSVSRSRIG TG >Mature_401_residues AEQHLSQLEPKATDIRRITGGLAVPRAVIIGPIAAYIAFVMEFTLVPLLLPAIQSQFGLSVGDLAWVFNSYGAAVAIGVL FCGYFGDTLNIRRVFGLGVALFATGALVSAIAQNYETLVAGRLLQGFGSGVFSPLVPIYLTRASPDTPGRALILWGSIAG YIAAFAPLLYGNLLGDHSWRLAFVFIAIIAACAWVLLTRSQLSQDPEPATSCKRDYREILRSRDLLITFAYVFCTYGSIT YYIFRLPIWLSENEIGASSIGLFLSVAWLTFSFISTLLRNLVDRHHILGIMLAAPLLIAVAVLLLFNHQSFLLVALSSIL IGAGLACSNAPSTQLILRFAPEGMTAVSASLDITFARIGGIATISILAWMEGGYADLTICVLCLLALVCAQSVSRSRIGT G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43148; Mature: 43017
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQHLSQLEPKATDIRRITGGLAVPRAVIIGPIAAYIAFVMEFTLVPLLLPAIQSQFGL CCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SVGDLAWVFNSYGAAVAIGVLFCGYFGDTLNIRRVFGLGVALFATGALVSAIAQNYETLV CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGRLLQGFGSGVFSPLVPIYLTRASPDTPGRALILWGSIAGYIAAFAPLLYGNLLGDHSW HHHHHHHHCCCHHHHHHHHEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCH RLAFVFIAIIAACAWVLLTRSQLSQDPEPATSCKRDYREILRSRDLLITFAYVFCTYGSI HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHH TYYIFRLPIWLSENEIGASSIGLFLSVAWLTFSFISTLLRNLVDRHHILGIMLAAPLLIA HHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVLLLFNHQSFLLVALSSILIGAGLACSNAPSTQLILRFAPEGMTAVSASLDITFARIG HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEHHHHEEHHHHHC GIATISILAWMEGGYADLTICVLCLLALVCAQSVSRSRIGTG CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AEQHLSQLEPKATDIRRITGGLAVPRAVIIGPIAAYIAFVMEFTLVPLLLPAIQSQFGL CHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SVGDLAWVFNSYGAAVAIGVLFCGYFGDTLNIRRVFGLGVALFATGALVSAIAQNYETLV CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGRLLQGFGSGVFSPLVPIYLTRASPDTPGRALILWGSIAGYIAAFAPLLYGNLLGDHSW HHHHHHHHCCCHHHHHHHHEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCH RLAFVFIAIIAACAWVLLTRSQLSQDPEPATSCKRDYREILRSRDLLITFAYVFCTYGSI HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHH TYYIFRLPIWLSENEIGASSIGLFLSVAWLTFSFISTLLRNLVDRHHILGIMLAAPLLIA HHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVLLLFNHQSFLLVALSSILIGAGLACSNAPSTQLILRFAPEGMTAVSASLDITFARIG HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEHHHHEEHHHHHC GIATISILAWMEGGYADLTICVLCLLALVCAQSVSRSRIGTG CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]