| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is pyrG
Identifier: 89055672
GI number: 89055672
Start: 3221921
End: 3223564
Strand: Direct
Name: pyrG
Synonym: Jann_3181
Alternate gene names: 89055672
Gene position: 3221921-3223564 (Clockwise)
Preceding gene: 89055671
Following gene: 89055673
Centisome position: 74.62
GC content: 60.1
Gene sequence:
>1644_bases ATGGCGCGTTTTATTTTCATCACCGGTGGTGTCGTCTCATCGCTCGGCAAAGGCCTAGCGTCCGCCGCACTGGGTGCGTT GTTGCAAGCGCGCGGATTTTCGGTGCGGTTGCGCAAGCTAGACCCTTACCTGAACGTGGATCCCGGCACGATGTCGCCCT TTGAGCATGGAGAGGTGTTTGTCACCGACGATGGGGCGGAAACCGACCTCGACCTCGGCCACTATGAGCGGTTCACGGGC GTGCCCGCCAGCAAGACGGATTCCATCTCATCGGGCCGGATCTACACCAATGTGTTGGAGAAGGAGCGGCGCGGAGATTA TCTGGGCAAGACCATTCAGGTCATTCCCCACGTCACCAATGAGATCAAGGATTTCATCAACATAGGCGAAGACGATGTCG ACTTCATGCTGTGCGAAATCGGCGGCACGGTCGGTGATATCGAAGGCCTGCCGTTTTTTGAGGCGATCCGGCAGTTCAGC CAGGACAAAGCGCGCGGGCAGTGTATTTTCATGCACCTCACGCTGTTGCCCTTCATCAAGGCGAGCGGGGAGCTGAAGAC CAAGCCGACCCAGCACAGTGTCAAGGAACTCCGCTCCATCGGGCTGGCGCCTGACATCCTTGTGTGCCGGTCCGAGGGCC CGATCCCGGAAAAAGAGCGCGAGAAACTGGCGCTGTTCTGCAACGTGCGCCCTGATTCCGTAATCGCGGCGCAGGACTTG TCGTCGATCTATACCGCGCCGCTGGCCTACCACCGTGAGGGCCTTGATCAAGCCGTGCTCGATGCGTTTGGCATCACCCC TGCCCCGAAACCCAACCTCAGCATCTGGGAGGATGTGGCCGATCGGATCAACAACCCGGAGGGCGTCGTAAAGGTCGCGA TCGTCGGCAAATATACGCAGTTGGAGGACGCCTACAAATCCATCGCCGAAGCGCTGACCCACGGCGGCATGGCGAACCGT GTGAAGGTGGAAATCGAATGGGTCGACGCCGAGACGTTCGAGCGCGAAGACCCGGCCCCGCATCTGCAAGGCTTCCACGC GATCCTGGTCCCGGGCGGGTTCGGAGAGCGCGGGACGGAAGGTAAAATCAAGGCGGCCGAATTCGCGCGGACCCGGAAAG TCCCGTATCTGGGGATCTGCCTTGGTATGCAGATGGCGGTGATTGAGGCGGCGCGCAATCTGGCGCAACTGGACGATGCC GGATCCGAGGAATTCGATCACGAAGCGGGTAAAAAGCGTTTCACACCCGTTGTTTACCATCTGAAAGAATGGGTGCAGGG CAATCACAAGGTTGAGCGCAAAGTCGGTGACGACAAGGGCGGAACCATGCGTCTGGGGGCCTATGACGCCGTGTTGACCG AAGGCTCCCGCGTGGCCGAGGCCTACGGGACGACGGCGATTGAGGAACGGCACCGCCACCGCTACGAGGTCGACACGAAA TACCGGGACGCGTTGGAGGAGAAGGGCCTGATCTTCTCGGGCATGTCACCCGACGGGGCATTGCCCGAGATCGTGGAGGT CAAGGATCATCCCTGGTTCATCGGCGTTCAATTCCACCCCGAACTGAAGTCCAAGCCCTTTGAGCCACACCCCCTGTTTC GCGATTTCGTGCGCGCGGCAAAAGAGAATTCGCGCCTCGTCTGA
Upstream 100 bases:
>100_bases GTGCGCTGGCCCCGAATCCGGGTACTCTCAAATCCCGTGATAATAGCAATGATGGACCGGCCCCGGACGGCCCCACCATC CGCACGGGAGGTTTTCAGGC
Downstream 100 bases:
>100_bases GCGCGGGAATTCGGGCCGTCTTAACGAATCCTCAACCCTTCGCGATGAGTATGGGGTGAATGTGCCACATCTTTGCCGCA ATTGATCACTCGGTGGCGGC
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MARFIFITGGVVSSLGKGLASAALGALLQARGFSVRLRKLDPYLNVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFTG VPASKTDSISSGRIYTNVLEKERRGDYLGKTIQVIPHVTNEIKDFINIGEDDVDFMLCEIGGTVGDIEGLPFFEAIRQFS QDKARGQCIFMHLTLLPFIKASGELKTKPTQHSVKELRSIGLAPDILVCRSEGPIPEKEREKLALFCNVRPDSVIAAQDL SSIYTAPLAYHREGLDQAVLDAFGITPAPKPNLSIWEDVADRINNPEGVVKVAIVGKYTQLEDAYKSIAEALTHGGMANR VKVEIEWVDAETFEREDPAPHLQGFHAILVPGGFGERGTEGKIKAAEFARTRKVPYLGICLGMQMAVIEAARNLAQLDDA GSEEFDHEAGKKRFTPVVYHLKEWVQGNHKVERKVGDDKGGTMRLGAYDAVLTEGSRVAEAYGTTAIEERHRHRYEVDTK YRDALEEKGLIFSGMSPDGALPEIVEVKDHPWFIGVQFHPELKSKPFEPHPLFRDFVRAAKENSRLV
Sequences:
>Translated_547_residues MARFIFITGGVVSSLGKGLASAALGALLQARGFSVRLRKLDPYLNVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFTG VPASKTDSISSGRIYTNVLEKERRGDYLGKTIQVIPHVTNEIKDFINIGEDDVDFMLCEIGGTVGDIEGLPFFEAIRQFS QDKARGQCIFMHLTLLPFIKASGELKTKPTQHSVKELRSIGLAPDILVCRSEGPIPEKEREKLALFCNVRPDSVIAAQDL SSIYTAPLAYHREGLDQAVLDAFGITPAPKPNLSIWEDVADRINNPEGVVKVAIVGKYTQLEDAYKSIAEALTHGGMANR VKVEIEWVDAETFEREDPAPHLQGFHAILVPGGFGERGTEGKIKAAEFARTRKVPYLGICLGMQMAVIEAARNLAQLDDA GSEEFDHEAGKKRFTPVVYHLKEWVQGNHKVERKVGDDKGGTMRLGAYDAVLTEGSRVAEAYGTTAIEERHRHRYEVDTK YRDALEEKGLIFSGMSPDGALPEIVEVKDHPWFIGVQFHPELKSKPFEPHPLFRDFVRAAKENSRLV >Mature_546_residues ARFIFITGGVVSSLGKGLASAALGALLQARGFSVRLRKLDPYLNVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFTGV PASKTDSISSGRIYTNVLEKERRGDYLGKTIQVIPHVTNEIKDFINIGEDDVDFMLCEIGGTVGDIEGLPFFEAIRQFSQ DKARGQCIFMHLTLLPFIKASGELKTKPTQHSVKELRSIGLAPDILVCRSEGPIPEKEREKLALFCNVRPDSVIAAQDLS SIYTAPLAYHREGLDQAVLDAFGITPAPKPNLSIWEDVADRINNPEGVVKVAIVGKYTQLEDAYKSIAEALTHGGMANRV KVEIEWVDAETFEREDPAPHLQGFHAILVPGGFGERGTEGKIKAAEFARTRKVPYLGICLGMQMAVIEAARNLAQLDDAG SEEFDHEAGKKRFTPVVYHLKEWVQGNHKVERKVGDDKGGTMRLGAYDAVLTEGSRVAEAYGTTAIEERHRHRYEVDTKY RDALEEKGLIFSGMSPDGALPEIVEVKDHPWFIGVQFHPELKSKPFEPHPLFRDFVRAAKENSRLV
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=560, Percent_Identity=43.3928571428571, Blast_Score=474, Evalue=1e-134, Organism=Homo sapiens, GI28559085, Length=567, Percent_Identity=43.2098765432099, Blast_Score=467, Evalue=1e-131, Organism=Homo sapiens, GI28559083, Length=567, Percent_Identity=43.2098765432099, Blast_Score=467, Evalue=1e-131, Organism=Homo sapiens, GI221316689, Length=567, Percent_Identity=43.2098765432099, Blast_Score=467, Evalue=1e-131, Organism=Escherichia coli, GI1789142, Length=542, Percent_Identity=54.4280442804428, Blast_Score=568, Evalue=1e-163, Organism=Caenorhabditis elegans, GI25148299, Length=612, Percent_Identity=37.9084967320261, Blast_Score=419, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6322563, Length=569, Percent_Identity=41.4762741652021, Blast_Score=445, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6319432, Length=572, Percent_Identity=41.4335664335664, Blast_Score=436, Evalue=1e-123, Organism=Drosophila melanogaster, GI24664469, Length=560, Percent_Identity=43.2142857142857, Blast_Score=459, Evalue=1e-129, Organism=Drosophila melanogaster, GI21357815, Length=505, Percent_Identity=42.5742574257426, Blast_Score=394, Evalue=1e-110,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_JANSC (Q28MG4)
Other databases:
- EMBL: CP000264 - RefSeq: YP_511123.1 - HSSP: P17812 - ProteinModelPortal: Q28MG4 - SMR: Q28MG4 - STRING: Q28MG4 - GeneID: 3935652 - GenomeReviews: CP000264_GR - KEGG: jan:Jann_3181 - eggNOG: COG0504 - HOGENOM: HBG597806 - OMA: IIHAGAN - PhylomeDB: Q28MG4 - ProtClustDB: PRK05380 - BioCyc: JSP290400:JANN_3181-MONOMER - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 60528; Mature: 60397
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 380-380 ACT_SITE 519-519 ACT_SITE 521-521
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFIFITGGVVSSLGKGLASAALGALLQARGFSVRLRKLDPYLNVDPGTMSPFEHGEVF CCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGVPASKTDSISSGRIYTNVLEKERRGDYLGKTIQVIPHVTN EECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH EIKDFINIGEDDVDFMLCEIGGTVGDIEGLPFFEAIRQFSQDKARGQCIFMHLTLLPFIK HHHHHHHCCCCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHH ASGELKTKPTQHSVKELRSIGLAPDILVCRSEGPIPEKEREKLALFCNVRPDSVIAAQDL CCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCEEEEEECCCCCEEHHHHH SSIYTAPLAYHREGLDQAVLDAFGITPAPKPNLSIWEDVADRINNPEGVVKVAIVGKYTQ HHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCHHH LEDAYKSIAEALTHGGMANRVKVEIEWVDAETFEREDPAPHLQGFHAILVPGGFGERGTE HHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHCCCCCCCHHHCCCEEEEECCCCCCCCCC GKIKAAEFARTRKVPYLGICLGMQMAVIEAARNLAQLDDAGSEEFDHEAGKKRFTPVVYH CCEEHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHCCHHHHH LKEWVQGNHKVERKVGDDKGGTMRLGAYDAVLTEGSRVAEAYGTTAIEERHRHRYEVDTK HHHHHCCCCHHHHHCCCCCCCEEEECCHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCCHH YRDALEEKGLIFSGMSPDGALPEIVEVKDHPWFIGVQFHPELKSKPFEPHPLFRDFVRAA HHHHHHHCCCEEECCCCCCCCCHHEEECCCCEEEEEEECCHHCCCCCCCCHHHHHHHHHH KENSRLV HCCCCCC >Mature Secondary Structure ARFIFITGGVVSSLGKGLASAALGALLQARGFSVRLRKLDPYLNVDPGTMSPFEHGEVF CEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGVPASKTDSISSGRIYTNVLEKERRGDYLGKTIQVIPHVTN EECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH EIKDFINIGEDDVDFMLCEIGGTVGDIEGLPFFEAIRQFSQDKARGQCIFMHLTLLPFIK HHHHHHHCCCCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHH ASGELKTKPTQHSVKELRSIGLAPDILVCRSEGPIPEKEREKLALFCNVRPDSVIAAQDL CCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCCEEEEEECCCCCEEHHHHH SSIYTAPLAYHREGLDQAVLDAFGITPAPKPNLSIWEDVADRINNPEGVVKVAIVGKYTQ HHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCHHH LEDAYKSIAEALTHGGMANRVKVEIEWVDAETFEREDPAPHLQGFHAILVPGGFGERGTE HHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHCCCCCCCHHHCCCEEEEECCCCCCCCCC GKIKAAEFARTRKVPYLGICLGMQMAVIEAARNLAQLDDAGSEEFDHEAGKKRFTPVVYH CCEEHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHCCHHHHH LKEWVQGNHKVERKVGDDKGGTMRLGAYDAVLTEGSRVAEAYGTTAIEERHRHRYEVDTK HHHHHCCCCHHHHHCCCCCCCEEEECCHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCCHH YRDALEEKGLIFSGMSPDGALPEIVEVKDHPWFIGVQFHPELKSKPFEPHPLFRDFVRAA HHHHHHHCCCEEECCCCCCCCCHHEEECCCCEEEEEEECCHHCCCCCCCCHHHHHHHHHH KENSRLV HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA