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The map label for this gene is 89055599

Identifier: 89055599

GI number: 89055599

Start: 3142310

End: 3143467

Strand: Direct

Name: 89055599

Synonym: Jann_3108

Alternate gene names: NA

Gene position: 3142310-3143467 (Clockwise)

Preceding gene: 89055598

Following gene: 89055600

Centisome position: 72.77

GC content: 60.71

Gene sequence:

>1158_bases
ATGAACACGCTGTTCCTCGCCCTCTCCTATCTCAAATATCATTGGCTGCGCTCGGCCATTCTCGTGCTTGTGGCCGCAAT
GATCCTGTCGGTGCCGTTGATCAGCCAGGTTCTGCTGGACGGGGCACGCACATCCCTGACGGACCGGGCCGAGGCCACGC
CACTGGTCCTTGGCAATCGCGGCAGCCAGCTCGATCTGGTGATGAACGCTCTCTATTTCTCGGACGACCGCGCAGAGCCC
GTGACCATGGCCGCCACGGAAGAGGTCTGGGACAGTGCGACCGCTGTTCCAATCCCGCTGAACACGGCGTTCGAGACGAA
TGGCGCGCGGATCGTGGGGACCAGCCTGGACTATTTCGAGTTTCGCGACCTGACGATTGCGGACGGACGCCAACTCGCCA
TATTAGGGGAGGCTGTACTGGGCGCTGCAACGGCACATCGACTTGGCCTGGGTCCCGGCGACACAATTGTCTCCGCGCCC
CAGAACCTCTTTGATCTTGATGGCGTCTACCCGCTGGAGTTGAACATTGTCGGCGTGCTGGCTGCCACCGGCACACCTGA
TGACGAAGCGGTTTTCGTGGACATCGCCACAACCTGGGTGATCTCTGGCATCGGCCACGGGCATGACGGGGTGGTGTCCG
CAGATGCCGATGCGGACGAGGTGGTCGCCAATGCGGCGATCGTGGAATTCAACCGCATCACGGCGGACAACATCGACAGC
TTCCATTTCCACGGCGATCCCGCGACCTATCCTGTATCAGGCATCCTTGTTGTCCCCGATGATGACCGCGCGGGTACAAT
CCTGCGGGGCCGCTATCTGGACACCGCCAATCCCCTGCAAATCATCGTGCCGGAGGAGGTTGTCGGTGAACTGGTTGATC
GCATTTTCCGCATCAAGTCGCTTCTGGATGCGGTCACGCTGATTGTGGGCGCCGCGGCTTTGGCGGCGGTTGGACTTGCG
GTCTTCCTGAGCTACCGTTTGCGGGCCCAAGAGATGCAGACGGCGTTCAAACTGGGAGCACGCCCCGGAATGATCCTTCG
CCTGTTGGCCTCGGAAACGGTGATCTTGCTTACGTTTGCGGGGCTGATCGCGGTTGCCATCGTTTTGGCGGTGCAACAAT
CGGGTGATACAATCGTGGCCTGGCTGCTGGCCACATAA

Upstream 100 bases:

>100_bases
GCGCGACGTTGCTCGCCGTGACCCATGATCACGATCTCCTGCCGCGCTTTGATCGCGTCATCGACTTCGCGGACTATCGG
ATGGCTGCGGAGGGCGTGGC

Downstream 100 bases:

>100_bases
CATCAAGACCAACAGACATGACACGGGAGACTTCCATGAAACTGACACTCGCAATTGCGCTGACAATGACCGCGCTGACC
GCCGGAGCCGCATTGGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MNTLFLALSYLKYHWLRSAILVLVAAMILSVPLISQVLLDGARTSLTDRAEATPLVLGNRGSQLDLVMNALYFSDDRAEP
VTMAATEEVWDSATAVPIPLNTAFETNGARIVGTSLDYFEFRDLTIADGRQLAILGEAVLGAATAHRLGLGPGDTIVSAP
QNLFDLDGVYPLELNIVGVLAATGTPDDEAVFVDIATTWVISGIGHGHDGVVSADADADEVVANAAIVEFNRITADNIDS
FHFHGDPATYPVSGILVVPDDDRAGTILRGRYLDTANPLQIIVPEEVVGELVDRIFRIKSLLDAVTLIVGAAALAAVGLA
VFLSYRLRAQEMQTAFKLGARPGMILRLLASETVILLTFAGLIAVAIVLAVQQSGDTIVAWLLAT

Sequences:

>Translated_385_residues
MNTLFLALSYLKYHWLRSAILVLVAAMILSVPLISQVLLDGARTSLTDRAEATPLVLGNRGSQLDLVMNALYFSDDRAEP
VTMAATEEVWDSATAVPIPLNTAFETNGARIVGTSLDYFEFRDLTIADGRQLAILGEAVLGAATAHRLGLGPGDTIVSAP
QNLFDLDGVYPLELNIVGVLAATGTPDDEAVFVDIATTWVISGIGHGHDGVVSADADADEVVANAAIVEFNRITADNIDS
FHFHGDPATYPVSGILVVPDDDRAGTILRGRYLDTANPLQIIVPEEVVGELVDRIFRIKSLLDAVTLIVGAAALAAVGLA
VFLSYRLRAQEMQTAFKLGARPGMILRLLASETVILLTFAGLIAVAIVLAVQQSGDTIVAWLLAT
>Mature_385_residues
MNTLFLALSYLKYHWLRSAILVLVAAMILSVPLISQVLLDGARTSLTDRAEATPLVLGNRGSQLDLVMNALYFSDDRAEP
VTMAATEEVWDSATAVPIPLNTAFETNGARIVGTSLDYFEFRDLTIADGRQLAILGEAVLGAATAHRLGLGPGDTIVSAP
QNLFDLDGVYPLELNIVGVLAATGTPDDEAVFVDIATTWVISGIGHGHDGVVSADADADEVVANAAIVEFNRITADNIDS
FHFHGDPATYPVSGILVVPDDDRAGTILRGRYLDTANPLQIIVPEEVVGELVDRIFRIKSLLDAVTLIVGAAALAAVGLA
VFLSYRLRAQEMQTAFKLGARPGMILRLLASETVILLTFAGLIAVAIVLAVQQSGDTIVAWLLAT

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40884; Mature: 40884

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLFLALSYLKYHWLRSAILVLVAAMILSVPLISQVLLDGARTSLTDRAEATPLVLGNR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC
GSQLDLVMNALYFSDDRAEPVTMAATEEVWDSATAVPIPLNTAFETNGARIVGTSLDYFE
CCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCCCEEECCCCEECCCCEEEECCCCCEE
FRDLTIADGRQLAILGEAVLGAATAHRLGLGPGDTIVSAPQNLFDLDGVYPLELNIVGVL
ECCEEEECCCEEEEEHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHCCCCEEEEEEEEEEE
AATGTPDDEAVFVDIATTWVISGIGHGHDGVVSADADADEVVANAAIVEFNRITADNIDS
EECCCCCCCEEEEEEEHHHHHHCCCCCCCCEEECCCCHHHHHHHHHEEEEECCCCCCCCC
FHFHGDPATYPVSGILVVPDDDRAGTILRGRYLDTANPLQIIVPEEVVGELVDRIFRIKS
EEECCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHH
LLDAVTLIVGAAALAAVGLAVFLSYRLRAQEMQTAFKLGARPGMILRLLASETVILLTFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHH
GLIAVAIVLAVQQSGDTIVAWLLAT
HHHHHHHHHHHHCCCCEEEEEEEEC
>Mature Secondary Structure
MNTLFLALSYLKYHWLRSAILVLVAAMILSVPLISQVLLDGARTSLTDRAEATPLVLGNR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC
GSQLDLVMNALYFSDDRAEPVTMAATEEVWDSATAVPIPLNTAFETNGARIVGTSLDYFE
CCCHHHHHHHHHCCCCCCCCEEEEEHHHHHCCCCCCEEECCCCEECCCCEEEECCCCCEE
FRDLTIADGRQLAILGEAVLGAATAHRLGLGPGDTIVSAPQNLFDLDGVYPLELNIVGVL
ECCEEEECCCEEEEEHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHCCCCEEEEEEEEEEE
AATGTPDDEAVFVDIATTWVISGIGHGHDGVVSADADADEVVANAAIVEFNRITADNIDS
EECCCCCCCEEEEEEEHHHHHHCCCCCCCCEEECCCCHHHHHHHHHEEEEECCCCCCCCC
FHFHGDPATYPVSGILVVPDDDRAGTILRGRYLDTANPLQIIVPEEVVGELVDRIFRIKS
EEECCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHH
LLDAVTLIVGAAALAAVGLAVFLSYRLRAQEMQTAFKLGARPGMILRLLASETVILLTFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHH
GLIAVAIVLAVQQSGDTIVAWLLAT
HHHHHHHHHHHHCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA