The gene/protein map for NC_005956 is currently unavailable.
Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89055595

Identifier: 89055595

GI number: 89055595

Start: 3139356

End: 3139613

Strand: Direct

Name: 89055595

Synonym: Jann_3104

Alternate gene names: NA

Gene position: 3139356-3139613 (Clockwise)

Preceding gene: 89055594

Following gene: 89055597

Centisome position: 72.7

GC content: 56.59

Gene sequence:

>258_bases
TTGTATGACGCGCTGAAAACTGGGTTTCCCGATGCCGTTCACACTCTGGATATGCGGCACCCGGTTGGGCCAGACATGGC
GATGGTCTACTGGACGTTTTCCGGCACCCACTCGGGCCCGTTCTTCGGCACATCTGCGAGCGGCCATGAGATGTCCATCC
ATCGCGTTGATATATTCCGCGTCCGTGATGGCCAGTTTGTGAAGCGATGGCATGTCGAAGAACTGATGTCCCTGCTTCAA
CAGATCGCGCCGCGATAA

Upstream 100 bases:

>100_bases
CGTCAAAGGACGTATCGGCTTTCTTTGCGGAAGGCTTTGTCGACAATTACAGGCCATCCATTGCGCCACCCGGGTCCCTG
ACCGGGCGGTCGCCCTCAAT

Downstream 100 bases:

>100_bases
AGCTGCGGCTGCCCTACGGTGCGATCGACAGGCTCATGCACCGCATCAGCCGCTCGACCGCGATGGCCTTGGCGTCGTCA
GTCAGGCCAAGAGTGCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MYDALKTGFPDAVHTLDMRHPVGPDMAMVYWTFSGTHSGPFFGTSASGHEMSIHRVDIFRVRDGQFVKRWHVEELMSLLQ
QIAPR

Sequences:

>Translated_85_residues
MYDALKTGFPDAVHTLDMRHPVGPDMAMVYWTFSGTHSGPFFGTSASGHEMSIHRVDIFRVRDGQFVKRWHVEELMSLLQ
QIAPR
>Mature_85_residues
MYDALKTGFPDAVHTLDMRHPVGPDMAMVYWTFSGTHSGPFFGTSASGHEMSIHRVDIFRVRDGQFVKRWHVEELMSLLQ
QIAPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9733; Mature: 9733

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDALKTGFPDAVHTLDMRHPVGPDMAMVYWTFSGTHSGPFFGTSASGHEMSIHRVDIFR
CCCCCCCCCCCHHHEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEE
VRDGQFVKRWHVEELMSLLQQIAPR
ECCCCHHHHHCHHHHHHHHHHHCCC
>Mature Secondary Structure
MYDALKTGFPDAVHTLDMRHPVGPDMAMVYWTFSGTHSGPFFGTSASGHEMSIHRVDIFR
CCCCCCCCCCCHHHEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEE
VRDGQFVKRWHVEELMSLLQQIAPR
ECCCCHHHHHCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA